data_0B3 # _chem_comp.id 0B3 _chem_comp.name "(6R)-2-amino-3,6-dimethyl-6-(2-phenylethyl)-5,6-dihydropyrimidin-4(3H)-one" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C14 H19 N3 O" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2013-05-23 _chem_comp.pdbx_modified_date 2013-09-27 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 245.320 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 0B3 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 3WB4 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 0B3 O O O 0 1 N N N 16.505 41.966 -10.067 3.966 -1.799 0.811 O 0B3 1 0B3 C5 C5 C 0 1 N N N 16.314 41.008 -9.337 3.117 -0.960 0.594 C5 0B3 2 0B3 N3 N3 N 0 1 N N N 15.996 41.152 -8.046 3.462 0.249 0.106 N3 0B3 3 0B3 C4 C4 C 0 1 N N N 15.766 42.494 -7.526 4.868 0.552 -0.174 C4 0B3 4 0B3 C3 C3 C 0 1 N N N 15.896 40.053 -7.270 2.493 1.202 -0.128 C3 0B3 5 0B3 N2 N2 N 0 1 N N N 15.209 40.114 -6.131 2.859 2.523 -0.233 N2 0B3 6 0B3 N1 N1 N 0 1 N N N 16.447 38.958 -7.568 1.243 0.878 -0.253 N1 0B3 7 0B3 C6 C6 C 0 1 N N N 16.455 39.619 -9.891 1.663 -1.261 0.859 C6 0B3 8 0B3 C2 C2 C 0 1 N N R 17.133 38.767 -8.833 0.802 -0.513 -0.156 C2 0B3 9 0B3 C1 C1 C 0 1 N N N 17.066 37.304 -9.244 0.939 -1.177 -1.527 C1 0B3 10 0B3 C7 C7 C 0 1 N N N 18.601 39.195 -8.715 -0.662 -0.558 0.288 C7 0B3 11 0B3 C8 C8 C 0 1 N N N 19.195 38.736 -7.384 -1.526 0.192 -0.729 C8 0B3 12 0B3 C9 C9 C 0 1 Y N N 20.521 39.409 -7.111 -2.967 0.147 -0.292 C9 0B3 13 0B3 C14 C14 C 0 1 Y N N 21.596 39.252 -7.976 -3.783 -0.891 -0.703 C14 0B3 14 0B3 C13 C13 C 0 1 Y N N 22.810 39.884 -7.706 -5.105 -0.931 -0.303 C13 0B3 15 0B3 C12 C12 C 0 1 Y N N 22.945 40.675 -6.568 -5.612 0.066 0.509 C12 0B3 16 0B3 C11 C11 C 0 1 Y N N 21.874 40.836 -5.699 -4.797 1.103 0.921 C11 0B3 17 0B3 C10 C10 C 0 1 Y N N 20.666 40.200 -5.976 -3.473 1.142 0.524 C10 0B3 18 0B3 H1 H1 H 0 1 N N N 15.517 42.436 -6.456 5.101 0.274 -1.202 H1 0B3 19 0B3 H2 H2 H 0 1 N N N 16.675 43.099 -7.658 5.044 1.618 -0.037 H2 0B3 20 0B3 H3 H3 H 0 1 N N N 14.933 42.961 -8.072 5.504 -0.012 0.508 H3 0B3 21 0B3 H4 H4 H 0 1 N N N 15.143 39.308 -5.543 3.790 2.776 -0.141 H4 0B3 22 0B3 H5 H5 H 0 1 N N N 14.759 40.966 -5.863 2.185 3.201 -0.397 H5 0B3 23 0B3 H6 H6 H 0 1 N N N 15.463 39.206 -10.125 1.489 -2.333 0.766 H6 0B3 24 0B3 H7 H7 H 0 1 N N N 17.068 39.640 -10.804 1.401 -0.935 1.866 H7 0B3 25 0B3 H8 H8 H 0 1 N N N 17.557 36.685 -8.479 0.608 -2.214 -1.463 H8 0B3 26 0B3 H9 H9 H 0 1 N N N 16.014 36.999 -9.343 0.324 -0.644 -2.252 H9 0B3 27 0B3 H10 H10 H 0 1 N N N 17.579 37.170 -10.208 1.982 -1.148 -1.842 H10 0B3 28 0B3 H11 H11 H 0 1 N N N 19.175 38.747 -9.540 -0.991 -1.595 0.349 H11 0B3 29 0B3 H12 H12 H 0 1 N N N 18.663 40.291 -8.779 -0.760 -0.087 1.266 H12 0B3 30 0B3 H13 H13 H 0 1 N N N 18.494 38.985 -6.574 -1.197 1.229 -0.790 H13 0B3 31 0B3 H14 H14 H 0 1 N N N 19.346 37.647 -7.416 -1.428 -0.279 -1.707 H14 0B3 32 0B3 H15 H15 H 0 1 N N N 21.492 38.639 -8.859 -3.386 -1.669 -1.338 H15 0B3 33 0B3 H16 H16 H 0 1 N N N 23.645 39.760 -8.380 -5.742 -1.742 -0.625 H16 0B3 34 0B3 H17 H17 H 0 1 N N N 23.885 41.165 -6.361 -6.646 0.034 0.821 H17 0B3 35 0B3 H18 H18 H 0 1 N N N 21.977 41.449 -4.816 -5.193 1.882 1.556 H18 0B3 36 0B3 H19 H19 H 0 1 N N N 19.832 40.323 -5.301 -2.835 1.950 0.849 H19 0B3 37 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 0B3 O C5 DOUB N N 1 0B3 C6 C5 SING N N 2 0B3 C6 C2 SING N N 3 0B3 C5 N3 SING N N 4 0B3 C1 C2 SING N N 5 0B3 C2 C7 SING N N 6 0B3 C2 N1 SING N N 7 0B3 C7 C8 SING N N 8 0B3 N3 C4 SING N N 9 0B3 N3 C3 SING N N 10 0B3 C14 C13 DOUB Y N 11 0B3 C14 C9 SING Y N 12 0B3 C13 C12 SING Y N 13 0B3 N1 C3 DOUB N N 14 0B3 C8 C9 SING N N 15 0B3 C3 N2 SING N N 16 0B3 C9 C10 DOUB Y N 17 0B3 C12 C11 DOUB Y N 18 0B3 C10 C11 SING Y N 19 0B3 C4 H1 SING N N 20 0B3 C4 H2 SING N N 21 0B3 C4 H3 SING N N 22 0B3 N2 H4 SING N N 23 0B3 N2 H5 SING N N 24 0B3 C6 H6 SING N N 25 0B3 C6 H7 SING N N 26 0B3 C1 H8 SING N N 27 0B3 C1 H9 SING N N 28 0B3 C1 H10 SING N N 29 0B3 C7 H11 SING N N 30 0B3 C7 H12 SING N N 31 0B3 C8 H13 SING N N 32 0B3 C8 H14 SING N N 33 0B3 C14 H15 SING N N 34 0B3 C13 H16 SING N N 35 0B3 C12 H17 SING N N 36 0B3 C11 H18 SING N N 37 0B3 C10 H19 SING N N 38 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 0B3 SMILES ACDLabs 12.01 "O=C2N(C(=NC(CCc1ccccc1)(C2)C)N)C" 0B3 InChI InChI 1.03 "InChI=1S/C14H19N3O/c1-14(9-8-11-6-4-3-5-7-11)10-12(18)17(2)13(15)16-14/h3-7H,8-10H2,1-2H3,(H2,15,16)/t14-/m1/s1" 0B3 InChIKey InChI 1.03 NHJCZSSEYRWDOJ-CQSZACIVSA-N 0B3 SMILES_CANONICAL CACTVS 3.370 "CN1C(=O)C[C@@](C)(CCc2ccccc2)N=C1N" 0B3 SMILES CACTVS 3.370 "CN1C(=O)C[C](C)(CCc2ccccc2)N=C1N" 0B3 SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "C[C@]1(CC(=O)N(C(=N1)N)C)CCc2ccccc2" 0B3 SMILES "OpenEye OEToolkits" 1.7.6 "CC1(CC(=O)N(C(=N1)N)C)CCc2ccccc2" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 0B3 "SYSTEMATIC NAME" ACDLabs 12.01 "(6R)-2-amino-3,6-dimethyl-6-(2-phenylethyl)-5,6-dihydropyrimidin-4(3H)-one" 0B3 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "(6R)-2-azanyl-3,6-dimethyl-6-(2-phenylethyl)-5H-pyrimidin-4-one" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 0B3 "Create component" 2013-05-23 PDBJ 0B3 "Initial release" 2013-10-02 RCSB #