data_0BO # _chem_comp.id 0BO _chem_comp.name "N-[(2S)-3-cyclohexyl-1-[[(2S,3R)-4-(cyclopropylamino)-3-oxidanyl-4-oxidanylidene-1-[(3S)-2-oxidanylidenepiperidin-3-yl]butan-2-yl]amino]-1-oxidanylidene-propan-2-yl]-1-benzofuran-2-carboxamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C30 H40 N4 O6" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2022-09-29 _chem_comp.pdbx_modified_date 2023-09-22 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 552.662 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 0BO _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8GXI _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBC # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 0BO C10 C1 C 0 1 N N N 9.901 15.465 26.245 -1.612 4.140 1.037 C10 0BO 1 0BO C15 C2 C 0 1 Y N N 11.831 8.103 22.933 -5.735 -1.350 -1.068 C15 0BO 2 0BO C17 C3 C 0 1 Y N N 13.366 6.410 23.854 -7.659 -2.741 -0.792 C17 0BO 3 0BO C20 C4 C 0 1 Y N N 12.304 9.004 23.903 -5.051 -2.087 -0.082 C20 0BO 4 0BO C24 C5 C 0 1 N N S 10.076 15.415 19.385 3.426 -0.237 0.592 C24 0BO 5 0BO C14 C6 C 0 1 Y N N 10.831 8.833 22.148 -4.795 -0.323 -1.517 C14 0BO 6 0BO C18 C7 C 0 1 Y N N 13.841 7.324 24.827 -6.993 -3.464 0.188 C18 0BO 7 0BO C19 C8 C 0 1 Y N N 13.315 8.622 24.860 -5.699 -3.148 0.540 C19 0BO 8 0BO C25 C9 C 0 1 N N N 9.568 14.772 18.057 4.534 -0.139 -0.459 C25 0BO 9 0BO C02 C10 C 0 1 N N N 10.237 14.244 21.592 1.037 0.013 0.181 C02 0BO 10 0BO C03 C11 C 0 1 N N S 9.511 13.737 22.848 -0.151 0.827 -0.265 C03 0BO 11 0BO C04 C12 C 0 1 N N N 9.887 14.791 23.913 -0.276 2.072 0.616 C04 0BO 12 0BO C05 C13 C 0 1 N N N 9.501 14.289 25.331 -1.404 2.960 0.087 C05 0BO 13 0BO C06 C14 C 0 1 N N N 8.001 13.943 25.275 -1.032 3.482 -1.302 C06 0BO 14 0BO C07 C15 C 0 1 N N N 7.091 15.162 25.475 -2.160 4.371 -1.832 C07 0BO 15 0BO C08 C16 C 0 1 N N N 7.537 16.114 26.621 -2.368 5.551 -0.881 C08 0BO 16 0BO C09 C17 C 0 1 N N N 8.842 15.718 27.321 -2.740 5.028 0.508 C09 0BO 17 0BO C12 C18 C 0 1 N N N 9.944 11.337 22.300 -2.439 0.298 -0.915 C12 0BO 18 0BO C13 C19 C 0 1 Y N N 10.761 10.111 22.734 -3.660 -0.511 -0.796 C13 0BO 19 0BO C16 C20 C 0 1 Y N N 12.376 6.783 22.915 -7.044 -1.690 -1.414 C16 0BO 20 0BO C26 C21 C 0 1 N N S 10.086 13.291 18.095 4.056 -0.779 -1.764 C26 0BO 21 0BO C27 C22 C 0 1 N N N 11.536 13.224 18.082 3.852 -2.280 -1.551 C27 0BO 22 0BO C28 C23 C 0 1 N N N 12.038 11.853 17.981 3.646 -2.941 -2.919 C28 0BO 23 0BO C29 C24 C 0 1 N N N 11.699 11.291 16.621 4.953 -2.853 -3.707 C29 0BO 24 0BO C31 C25 C 0 1 N N N 9.382 12.551 16.893 5.084 -0.552 -2.836 C31 0BO 25 0BO C33 C26 C 0 1 N N R 9.750 16.895 19.531 3.940 0.303 1.928 C33 0BO 26 0BO C35 C27 C 0 1 N N N 10.602 17.828 18.685 2.849 0.207 2.962 C35 0BO 27 0BO C37 C28 C 0 1 N N N 12.290 19.716 18.702 1.331 -1.094 4.356 C37 0BO 28 0BO C38 C29 C 0 1 N N N 13.300 20.432 19.604 0.457 -2.350 4.347 C38 0BO 29 0BO C39 C30 C 0 1 N N N 13.762 19.299 18.681 1.491 -2.145 5.456 C39 0BO 30 0BO N11 N1 N 0 1 N N N 10.132 12.491 23.186 -1.368 0.020 -0.146 N11 0BO 31 0BO N23 N2 N 0 1 N N N 9.416 14.876 20.571 2.271 0.554 0.158 N23 0BO 32 0BO N30 N3 N 0 1 N N N 10.268 11.523 16.201 5.456 -1.486 -3.710 N30 0BO 33 0BO N36 N4 N 0 1 N N N 11.428 18.788 19.439 2.392 -1.001 3.350 N36 0BO 34 0BO O01 O1 O 0 1 N N N 11.426 14.152 21.416 0.882 -1.128 0.561 O01 0BO 35 0BO O21 O2 O 0 1 Y N N 11.650 10.201 23.749 -3.821 -1.553 0.046 O21 0BO 36 0BO O22 O3 O 0 1 N N N 9.312 11.420 21.285 -2.395 1.220 -1.708 O22 0BO 37 0BO O32 O4 O 0 1 N N N 8.222 12.748 16.615 5.603 0.542 -2.911 O32 0BO 38 0BO O34 O5 O 0 1 N N N 9.860 17.320 20.917 4.330 1.668 1.772 O34 0BO 39 0BO O40 O6 O 0 1 N N N 10.620 17.732 17.516 2.381 1.216 3.446 O40 0BO 40 0BO H1 H1 H 0 1 N N N 10.859 15.230 26.733 -1.877 3.768 2.027 H1 0BO 41 0BO H2 H2 H 0 1 N N N 10.014 16.372 25.633 -0.692 4.721 1.102 H2 0BO 42 0BO H3 H3 H 0 1 N N N 13.768 5.408 23.829 -8.673 -3.001 -1.056 H3 0BO 43 0BO H4 H4 H 0 1 N N N 11.164 15.272 19.457 3.128 -1.279 0.711 H4 0BO 44 0BO H5 H5 H 0 1 N N N 10.268 8.468 21.301 -4.969 0.431 -2.270 H5 0BO 45 0BO H6 H6 H 0 1 N N N 14.599 7.024 25.535 -7.495 -4.284 0.680 H6 0BO 46 0BO H7 H7 H 0 1 N N N 13.663 9.332 25.596 -5.188 -3.724 1.298 H7 0BO 47 0BO H8 H8 H 0 1 N N N 9.982 15.304 17.188 4.777 0.909 -0.635 H8 0BO 48 0BO H9 H9 H 0 1 N N N 8.469 14.796 18.012 5.420 -0.663 -0.101 H9 0BO 49 0BO H10 H10 H 0 1 N N N 8.423 13.668 22.700 -0.015 1.129 -1.303 H10 0BO 50 0BO H11 H11 H 0 1 N N N 10.971 14.973 23.876 -0.500 1.771 1.640 H11 0BO 51 0BO H12 H12 H 0 1 N N N 9.350 15.728 23.701 0.662 2.626 0.597 H12 0BO 52 0BO H13 H13 H 0 1 N N N 10.088 13.394 25.586 -2.324 2.379 0.022 H13 0BO 53 0BO H14 H14 H 0 1 N N N 7.781 13.500 24.292 -0.112 4.063 -1.237 H14 0BO 54 0BO H15 H15 H 0 1 N N N 7.782 13.210 26.065 -0.883 2.641 -1.979 H15 0BO 55 0BO H16 H16 H 0 1 N N N 7.074 15.737 24.537 -1.895 4.743 -2.821 H16 0BO 56 0BO H17 H17 H 0 1 N N N 6.077 14.801 25.702 -3.080 3.790 -1.897 H17 0BO 57 0BO H18 H18 H 0 1 N N N 7.669 17.120 26.197 -1.448 6.132 -0.817 H18 0BO 58 0BO H19 H19 H 0 1 N N N 6.738 16.137 27.376 -3.171 6.184 -1.258 H19 0BO 59 0BO H20 H20 H 0 1 N N N 8.685 14.804 27.912 -3.660 4.447 0.443 H20 0BO 60 0BO H21 H21 H 0 1 N N N 9.171 16.532 27.984 -2.888 5.870 1.185 H21 0BO 61 0BO H22 H22 H 0 1 N N N 12.031 6.068 22.183 -7.569 -1.125 -2.170 H22 0BO 62 0BO H23 H23 H 0 1 N N N 9.715 12.835 19.025 3.113 -0.324 -2.066 H23 0BO 63 0BO H24 H24 H 0 1 N N N 11.917 13.670 19.012 4.732 -2.705 -1.067 H24 0BO 64 0BO H25 H25 H 0 1 N N N 11.907 13.799 17.221 2.975 -2.446 -0.926 H25 0BO 65 0BO H26 H26 H 0 1 N N N 11.571 11.233 18.761 3.371 -3.987 -2.782 H26 0BO 66 0BO H27 H27 H 0 1 N N N 13.130 11.851 18.117 2.854 -2.422 -3.459 H27 0BO 67 0BO H28 H28 H 0 1 N N N 11.883 10.207 16.639 5.694 -3.509 -3.251 H28 0BO 68 0BO H29 H29 H 0 1 N N N 12.359 11.762 15.878 4.775 -3.171 -4.735 H29 0BO 69 0BO H30 H30 H 0 1 N N N 8.705 17.031 19.215 4.799 -0.286 2.250 H30 0BO 70 0BO H31 H31 H 0 1 N N N 11.889 20.260 17.834 0.854 -0.151 4.625 H31 0BO 71 0BO H32 H32 H 0 1 N N N 13.272 20.278 20.693 -0.594 -2.233 4.610 H32 0BO 72 0BO H33 H33 H 0 1 N N N 13.591 21.471 19.388 0.672 -3.106 3.592 H33 0BO 73 0BO H34 H34 H 0 1 N N N 14.066 18.332 19.107 2.385 -2.767 5.432 H34 0BO 74 0BO H35 H35 H 0 1 N N N 14.385 19.524 17.803 1.120 -1.894 6.450 H35 0BO 75 0BO H36 H36 H 0 1 N N N 10.686 12.409 24.014 -1.403 -0.715 0.486 H36 0BO 76 0BO H37 H37 H 0 1 N N N 8.424 14.940 20.679 2.395 1.467 -0.146 H37 0BO 77 0BO H38 H38 H 0 1 N N N 9.890 10.986 15.446 6.103 -1.241 -4.390 H38 0BO 78 0BO H39 H39 H 0 1 N N N 11.401 18.806 20.438 2.766 -1.808 2.963 H39 0BO 79 0BO H40 H40 H 0 1 N N N 9.334 16.750 21.466 3.614 2.252 1.485 H40 0BO 80 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 0BO N30 C29 SING N N 1 0BO N30 C31 SING N N 2 0BO O32 C31 DOUB N N 3 0BO C29 C28 SING N N 4 0BO C31 C26 SING N N 5 0BO O40 C35 DOUB N N 6 0BO C28 C27 SING N N 7 0BO C25 C26 SING N N 8 0BO C25 C24 SING N N 9 0BO C27 C26 SING N N 10 0BO C39 C37 SING N N 11 0BO C39 C38 SING N N 12 0BO C35 N36 SING N N 13 0BO C35 C33 SING N N 14 0BO C37 N36 SING N N 15 0BO C37 C38 SING N N 16 0BO C24 C33 SING N N 17 0BO C24 N23 SING N N 18 0BO C33 O34 SING N N 19 0BO N23 C02 SING N N 20 0BO O22 C12 DOUB N N 21 0BO O01 C02 DOUB N N 22 0BO C02 C03 SING N N 23 0BO C14 C13 DOUB Y N 24 0BO C14 C15 SING Y N 25 0BO C12 C13 SING N N 26 0BO C12 N11 SING N N 27 0BO C13 O21 SING Y N 28 0BO C03 N11 SING N N 29 0BO C03 C04 SING N N 30 0BO C16 C15 DOUB Y N 31 0BO C16 C17 SING Y N 32 0BO C15 C20 SING Y N 33 0BO O21 C20 SING Y N 34 0BO C17 C18 DOUB Y N 35 0BO C20 C19 DOUB Y N 36 0BO C04 C05 SING N N 37 0BO C18 C19 SING Y N 38 0BO C06 C05 SING N N 39 0BO C06 C07 SING N N 40 0BO C05 C10 SING N N 41 0BO C07 C08 SING N N 42 0BO C10 C09 SING N N 43 0BO C08 C09 SING N N 44 0BO C10 H1 SING N N 45 0BO C10 H2 SING N N 46 0BO C17 H3 SING N N 47 0BO C24 H4 SING N N 48 0BO C14 H5 SING N N 49 0BO C18 H6 SING N N 50 0BO C19 H7 SING N N 51 0BO C25 H8 SING N N 52 0BO C25 H9 SING N N 53 0BO C03 H10 SING N N 54 0BO C04 H11 SING N N 55 0BO C04 H12 SING N N 56 0BO C05 H13 SING N N 57 0BO C06 H14 SING N N 58 0BO C06 H15 SING N N 59 0BO C07 H16 SING N N 60 0BO C07 H17 SING N N 61 0BO C08 H18 SING N N 62 0BO C08 H19 SING N N 63 0BO C09 H20 SING N N 64 0BO C09 H21 SING N N 65 0BO C16 H22 SING N N 66 0BO C26 H23 SING N N 67 0BO C27 H24 SING N N 68 0BO C27 H25 SING N N 69 0BO C28 H26 SING N N 70 0BO C28 H27 SING N N 71 0BO C29 H28 SING N N 72 0BO C29 H29 SING N N 73 0BO C33 H30 SING N N 74 0BO C37 H31 SING N N 75 0BO C38 H32 SING N N 76 0BO C38 H33 SING N N 77 0BO C39 H34 SING N N 78 0BO C39 H35 SING N N 79 0BO N11 H36 SING N N 80 0BO N23 H37 SING N N 81 0BO N30 H38 SING N N 82 0BO N36 H39 SING N N 83 0BO O34 H40 SING N N 84 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 0BO InChI InChI 1.06 "InChI=1S/C30H40N4O6/c35-26(30(39)32-21-12-13-21)22(16-20-10-6-14-31-27(20)36)33-28(37)23(15-18-7-2-1-3-8-18)34-29(38)25-17-19-9-4-5-11-24(19)40-25/h4-5,9,11,17-18,20-23,26,35H,1-3,6-8,10,12-16H2,(H,31,36)(H,32,39)(H,33,37)(H,34,38)/t20-,22-,23-,26+/m0/s1" 0BO InChIKey InChI 1.06 FLHCDUBGBDAQOK-PETUGJSASA-N 0BO SMILES_CANONICAL CACTVS 3.385 "O[C@H]([C@H](C[C@@H]1CCCNC1=O)NC(=O)[C@H](CC2CCCCC2)NC(=O)c3oc4ccccc4c3)C(=O)NC5CC5" 0BO SMILES CACTVS 3.385 "O[CH]([CH](C[CH]1CCCNC1=O)NC(=O)[CH](CC2CCCCC2)NC(=O)c3oc4ccccc4c3)C(=O)NC5CC5" 0BO SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1ccc2c(c1)cc(o2)C(=O)N[C@@H](CC3CCCCC3)C(=O)N[C@@H](C[C@@H]4CCCNC4=O)[C@H](C(=O)NC5CC5)O" 0BO SMILES "OpenEye OEToolkits" 2.0.7 "c1ccc2c(c1)cc(o2)C(=O)NC(CC3CCCCC3)C(=O)NC(CC4CCCNC4=O)C(C(=O)NC5CC5)O" # _pdbx_chem_comp_identifier.comp_id 0BO _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "~{N}-[(2~{S})-3-cyclohexyl-1-[[(2~{S},3~{R})-4-(cyclopropylamino)-3-oxidanyl-4-oxidanylidene-1-[(3~{S})-2-oxidanylidenepiperidin-3-yl]butan-2-yl]amino]-1-oxidanylidene-propan-2-yl]-1-benzofuran-2-carboxamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 0BO "Create component" 2022-09-29 PDBC 0BO "Initial release" 2023-09-27 RCSB #