data_0BT # _chem_comp.id 0BT _chem_comp.name "1-{2-deoxy-3,5-O-[(4-iodophenyl)(phosphono)methylidene]-beta-D-threo-pentofuranosyl}-5-methylpyrimidine-2,4(1H,3H)-dione" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C17 H18 I N2 O8 P" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2011-11-21 _chem_comp.pdbx_modified_date 2014-09-05 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 536.212 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 0BT _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 3UNU _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 0BT CAV CAV C 0 1 Y N N -3.108 22.580 31.438 -1.155 1.373 0.979 CAV 0BT 1 0BT CAW CAW C 0 1 Y N N -2.798 21.190 31.411 0.157 1.804 1.029 CAW 0BT 2 0BT CAX CAX C 0 1 Y N N -3.345 20.427 30.397 1.033 1.473 0.012 CAX 0BT 3 0BT I1 I1 I 0 1 N N N -2.886 18.400 30.407 3.022 2.126 0.087 I1 0BT 4 0BT CAY CAY C 0 1 Y N N -4.213 20.962 29.439 0.596 0.709 -1.055 CAY 0BT 5 0BT CAZ CAZ C 0 1 Y N N -4.516 22.321 29.441 -0.716 0.277 -1.104 CAZ 0BT 6 0BT CAU CAU C 0 1 Y N N -3.977 23.090 30.462 -1.590 0.605 -0.085 CAU 0BT 7 0BT CAB CAB C 0 1 N N R -4.354 24.553 30.518 -3.021 0.134 -0.139 CAB 0BT 8 0BT PAA PAA P 0 1 N N N -5.720 24.690 31.843 -4.123 1.551 -0.458 PAA 0BT 9 0BT OBC OBC O 0 1 N N N -6.532 25.977 31.739 -3.867 2.690 0.650 OBC 0BT 10 0BT OBA OBA O 0 1 N N N -6.791 23.546 31.604 -3.843 2.100 -1.804 OBA 0BT 11 0BT OBB OBB O 0 1 N N N -4.964 24.270 33.102 -5.656 1.065 -0.384 OBB 0BT 12 0BT OAH OAH O 0 1 N N N -4.877 25.008 29.317 -3.372 -0.482 1.101 OAH 0BT 13 0BT OAD OAD O 0 1 N N N -3.231 25.255 30.997 -3.171 -0.840 -1.179 OAD 0BT 14 0BT CAC CAC C 0 1 N N N -3.421 26.644 31.282 -2.292 -1.953 -1.023 CAC 0BT 15 0BT CAE CAE C 0 1 N N R -3.879 27.237 29.979 -2.565 -2.663 0.307 CAE 0BT 16 0BT OAF OAF O 0 1 N N N -2.838 27.249 29.051 -1.396 -3.455 0.613 OAF 0BT 17 0BT CAG CAG C 0 1 N N R -5.022 26.447 29.336 -2.632 -1.631 1.452 CAG 0BT 18 0BT CAI CAI C 0 1 N N N -4.796 26.719 27.908 -1.136 -1.306 1.662 CAI 0BT 19 0BT CAJ CAJ C 0 1 N N R -3.436 27.348 27.841 -0.473 -2.676 1.385 CAJ 0BT 20 0BT N1 N1 N 0 1 N N N -2.874 26.510 26.826 0.768 -2.484 0.631 N1 0BT 21 0BT C6 C6 C 0 1 N N N -3.335 25.288 26.416 0.803 -2.785 -0.704 C6 0BT 22 0BT C5 C5 C 0 1 N N N -2.704 24.589 25.366 1.947 -2.608 -1.399 C5 0BT 23 0BT CAR CAR C 0 1 N N N -3.197 23.331 24.898 2.005 -2.934 -2.869 CAR 0BT 24 0BT C4 C4 C 0 1 N N N -1.586 25.216 24.723 3.091 -2.112 -0.729 C4 0BT 25 0BT O4 O4 O 0 1 N N N -1.040 24.707 23.758 4.135 -1.948 -1.334 O4 0BT 26 0BT N3 N3 N 0 1 N N N -1.078 26.409 25.097 3.015 -1.827 0.587 N3 0BT 27 0BT C2 C2 C 0 1 N N N -1.711 27.062 26.174 1.861 -2.008 1.255 C2 0BT 28 0BT O2 O2 O 0 1 N N N -1.287 28.163 26.492 1.807 -1.747 2.441 O2 0BT 29 0BT H1 H1 H 0 1 N N N -2.684 23.226 32.192 -1.839 1.632 1.774 H1 0BT 30 0BT H2 H2 H 0 1 N N N -2.157 20.747 32.158 0.498 2.401 1.862 H2 0BT 31 0BT H3 H3 H 0 1 N N N -4.651 20.316 28.692 1.279 0.453 -1.852 H3 0BT 32 0BT H4 H4 H 0 1 N N N -5.145 22.758 28.679 -1.057 -0.319 -1.937 H4 0BT 33 0BT H5 H5 H 0 1 N N N -7.441 25.765 31.563 -4.420 3.476 0.542 H5 0BT 34 0BT H6 H6 H 0 1 N N N -5.314 23.447 33.422 -5.910 0.693 0.472 H6 0BT 35 0BT H7 H7 H 0 1 N N N -2.478 27.106 31.609 -2.446 -2.653 -1.844 H7 0BT 36 0BT H8 H8 H 0 1 N N N -4.186 26.780 32.061 -1.259 -1.603 -1.037 H8 0BT 37 0BT H9 H9 H 0 1 N N N -4.231 28.262 30.165 -3.463 -3.279 0.253 H9 0BT 38 0BT H10 H10 H 0 1 N N N -6.008 26.784 29.688 -3.058 -2.091 2.344 H10 0BT 39 0BT H11 H11 H 0 1 N N N -5.560 27.409 27.521 -0.795 -0.557 0.947 H11 0BT 40 0BT H12 H12 H 0 1 N N N -4.818 25.784 27.329 -0.947 -0.981 2.685 H12 0BT 41 0BT H13 H13 H 0 1 N N N -3.517 28.389 27.496 -0.260 -3.181 2.327 H13 0BT 42 0BT H14 H14 H 0 1 N N N -4.195 24.853 26.904 -0.079 -3.163 -1.198 H14 0BT 43 0BT H15 H15 H 0 1 N N N -4.051 23.018 25.517 1.734 -2.051 -3.448 H15 0BT 44 0BT H16 H16 H 0 1 N N N -3.520 23.430 23.851 3.016 -3.245 -3.133 H16 0BT 45 0BT H17 H17 H 0 1 N N N -2.399 22.577 24.966 1.308 -3.742 -3.090 H17 0BT 46 0BT H18 H18 H 0 1 N N N -0.289 26.811 24.632 3.795 -1.486 1.053 H18 0BT 47 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 0BT O4 C4 DOUB N N 1 0BT C4 N3 SING N N 2 0BT C4 C5 SING N N 3 0BT CAR C5 SING N N 4 0BT N3 C2 SING N N 5 0BT C5 C6 DOUB N N 6 0BT C2 O2 DOUB N N 7 0BT C2 N1 SING N N 8 0BT C6 N1 SING N N 9 0BT N1 CAJ SING N N 10 0BT CAJ CAI SING N N 11 0BT CAJ OAF SING N N 12 0BT CAI CAG SING N N 13 0BT OAF CAE SING N N 14 0BT OAH CAG SING N N 15 0BT OAH CAB SING N N 16 0BT CAG CAE SING N N 17 0BT CAY CAZ DOUB Y N 18 0BT CAY CAX SING Y N 19 0BT CAZ CAU SING Y N 20 0BT CAE CAC SING N N 21 0BT CAX I1 SING N N 22 0BT CAX CAW DOUB Y N 23 0BT CAU CAB SING N N 24 0BT CAU CAV DOUB Y N 25 0BT CAB OAD SING N N 26 0BT CAB PAA SING N N 27 0BT OAD CAC SING N N 28 0BT CAW CAV SING Y N 29 0BT OBA PAA DOUB N N 30 0BT OBC PAA SING N N 31 0BT PAA OBB SING N N 32 0BT CAV H1 SING N N 33 0BT CAW H2 SING N N 34 0BT CAY H3 SING N N 35 0BT CAZ H4 SING N N 36 0BT OBC H5 SING N N 37 0BT OBB H6 SING N N 38 0BT CAC H7 SING N N 39 0BT CAC H8 SING N N 40 0BT CAE H9 SING N N 41 0BT CAG H10 SING N N 42 0BT CAI H11 SING N N 43 0BT CAI H12 SING N N 44 0BT CAJ H13 SING N N 45 0BT C6 H14 SING N N 46 0BT CAR H15 SING N N 47 0BT CAR H16 SING N N 48 0BT CAR H17 SING N N 49 0BT N3 H18 SING N N 50 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 0BT SMILES ACDLabs 12.01 "O=C1C(=CN(C(=O)N1)C4OC2C(OC(OC2)(c3ccc(I)cc3)P(=O)(O)O)C4)C" 0BT InChI InChI 1.03 "InChI=1S/C17H18IN2O8P/c1-9-7-20(16(22)19-15(9)21)14-6-12-13(27-14)8-26-17(28-12,29(23,24)25)10-2-4-11(18)5-3-10/h2-5,7,12-14H,6,8H2,1H3,(H,19,21,22)(H2,23,24,25)/t12-,13-,14-,17-/m1/s1" 0BT InChIKey InChI 1.03 CXQVVVNMWAGPGY-VMUDFCTBSA-N 0BT SMILES_CANONICAL CACTVS 3.370 "CC1=CN([C@H]2C[C@H]3O[C@](OC[C@H]3O2)(c4ccc(I)cc4)[P](O)(O)=O)C(=O)NC1=O" 0BT SMILES CACTVS 3.370 "CC1=CN([CH]2C[CH]3O[C](OC[CH]3O2)(c4ccc(I)cc4)[P](O)(O)=O)C(=O)NC1=O" 0BT SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "CC1=CN(C(=O)NC1=O)[C@H]2C[C@@H]3[C@H](O2)CO[C@@](O3)(c4ccc(cc4)I)P(=O)(O)O" 0BT SMILES "OpenEye OEToolkits" 1.7.6 "CC1=CN(C(=O)NC1=O)C2CC3C(O2)COC(O3)(c4ccc(cc4)I)P(=O)(O)O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 0BT "SYSTEMATIC NAME" ACDLabs 12.01 "1-{2-deoxy-3,5-O-[(4-iodophenyl)(phosphono)methylidene]-beta-D-threo-pentofuranosyl}-5-methylpyrimidine-2,4(1H,3H)-dione" 0BT "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "[(2R,4aR,6R,7aR)-2-(4-iodophenyl)-6-[5-methyl-2,4-bis(oxidanylidene)pyrimidin-1-yl]-4a,6,7,7a-tetrahydro-4H-furo[3,2-d][1,3]dioxin-2-yl]phosphonic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 0BT "Create component" 2011-11-21 RCSB 0BT "Initial release" 2014-09-10 RCSB #