data_0FT # _chem_comp.id 0FT _chem_comp.name "1-{[1-(alpha-L-arabinofuranosyl)-1H-1,2,3-triazol-4-yl]methyl}-5-methyl-2,4-dioxo-1,2,3,4-tetrahydropyrimidine" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C13 H17 N5 O6" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2012-08-10 _chem_comp.pdbx_modified_date 2012-11-16 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 339.304 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 0FT _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 4G8Y _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 0FT C4 C4 C 0 1 N N N 35.404 4.591 23.835 -4.888 -1.196 -0.051 C4 DRG 1 0FT C5 C5 C 0 1 N N N 36.606 4.439 23.171 -4.676 -0.325 1.045 C5 DRG 2 0FT C6 C6 C 0 1 N N N 37.306 3.271 23.355 -3.807 0.700 0.911 C6 DRG 3 0FT C7 C7 C 0 1 N N N 37.616 1.103 24.339 -2.206 1.992 -0.421 C7 DRG 4 0FT C8 C8 C 0 1 Y N N 37.307 -0.369 23.945 -0.828 1.538 -0.013 C8 DRG 5 0FT C9 C9 C 0 1 Y N N 37.592 -1.006 22.720 0.150 1.082 -0.830 C9 DRG 6 0FT N1 N1 N 0 1 N N N 36.791 2.276 24.157 -3.149 0.880 -0.275 N1 DRG 7 0FT N3 N3 N 0 1 N N N 34.946 3.609 24.631 -4.220 -0.985 -1.203 N3 DRG 8 0FT O2 O2 O 0 1 N N N 35.196 1.615 25.516 -2.765 0.223 -2.355 O2 DRG 9 0FT C2 C2 C 0 1 N N N 35.649 2.467 24.802 -3.360 0.045 -1.309 C2 DRG 10 0FT O4 O4 O 0 1 N N N 34.681 5.749 23.672 -5.663 -2.130 0.048 O4 DRG 11 0FT C5A C5A C 0 1 N N N 37.110 5.517 22.294 -5.410 -0.538 2.344 C5A DRG 12 0FT N5 N5 N 0 1 Y N N 36.775 -1.377 24.743 -0.329 1.513 1.228 N5 DRG 13 0FT N6 N6 N 0 1 Y N N 36.712 -2.516 24.070 0.877 1.066 1.183 N6 DRG 14 0FT N7 N7 N 0 1 Y N N 37.148 -2.337 22.880 1.204 0.795 -0.032 N7 DRG 15 0FT "C1'" "C1'" C 0 1 N N R 37.292 -3.318 21.862 2.498 0.269 -0.475 "C1'" DRG 16 0FT "O4'" "O4'" O 0 1 N N N 37.170 -4.637 22.337 2.721 -1.037 0.080 "O4'" DRG 17 0FT "C4'" "C4'" C 0 1 N N S 38.491 -5.143 22.721 4.107 -1.199 0.407 "C4'" DRG 18 0FT "C5'" "C5'" C 0 1 N N N 38.792 -6.421 21.978 4.705 -2.339 -0.420 "C5'" DRG 19 0FT "O5'" "O5'" O 0 1 N N N 40.100 -6.391 21.418 4.110 -3.577 -0.025 "O5'" DRG 20 0FT "C3'" "C3'" C 0 1 N N R 39.453 -3.980 22.455 4.824 0.126 0.071 "C3'" DRG 21 0FT "O3'" "O3'" O 0 1 N N N 39.771 -3.237 23.626 5.786 0.453 1.075 "O3'" DRG 22 0FT "C2'" "C2'" C 0 1 N N R 38.724 -3.165 21.391 3.651 1.145 0.075 "C2'" DRG 23 0FT "O2'" "O2'" O 0 1 N N N 38.843 -3.774 20.112 3.922 2.246 -0.795 "O2'" DRG 24 0FT H1 H1 H 0 1 N N N 38.261 3.133 22.870 -3.632 1.375 1.735 H1 DRG 25 0FT H2 H2 H 0 1 N N N 37.806 1.065 25.422 -2.520 2.820 0.214 H2 DRG 26 0FT H3 H3 H 0 1 N N N 38.552 1.339 23.811 -2.188 2.319 -1.461 H3 DRG 27 0FT H4 H4 H 0 1 N N N 38.052 -0.569 21.846 0.098 0.969 -1.902 H4 DRG 28 0FT H5 H5 H 0 1 N N N 34.072 3.725 25.104 -4.360 -1.577 -1.958 H5 DRG 29 0FT H6 H6 H 0 1 N N N 36.396 6.354 22.293 -6.350 0.014 2.325 H6 DRG 30 0FT H7 H7 H 0 1 N N N 38.084 5.867 22.666 -5.615 -1.600 2.475 H7 DRG 31 0FT H8 H8 H 0 1 N N N 37.225 5.132 21.270 -4.796 -0.182 3.171 H8 DRG 32 0FT H9 H9 H 0 1 N N N 36.603 -3.127 21.026 2.537 0.229 -1.563 H9 DRG 33 0FT H10 H10 H 0 1 N N N 38.496 -5.355 23.800 4.213 -1.418 1.469 H10 DRG 34 0FT H11 H11 H 0 1 N N N 38.057 -6.548 21.169 4.508 -2.163 -1.478 H11 DRG 35 0FT H12 H12 H 0 1 N N N 38.719 -7.268 22.676 5.781 -2.383 -0.253 H12 DRG 36 0FT H13 H13 H 0 1 N N N 40.266 -7.204 20.956 4.443 -4.345 -0.509 H13 DRG 37 0FT H14 H14 H 0 1 N N N 40.373 -4.387 22.011 5.293 0.075 -0.912 H14 DRG 38 0FT H15 H15 H 0 1 N N N 40.221 -3.799 24.246 6.263 1.278 0.910 H15 DRG 39 0FT H16 H16 H 0 1 N N N 39.044 -2.113 21.400 3.435 1.490 1.086 H16 DRG 40 0FT H17 H17 H 0 1 N N N 39.737 -3.687 19.801 4.637 2.821 -0.491 H17 DRG 41 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 0FT "O2'" "C2'" SING N N 1 0FT "C2'" "C1'" SING N N 2 0FT "C2'" "C3'" SING N N 3 0FT "O5'" "C5'" SING N N 4 0FT "C1'" "O4'" SING N N 5 0FT "C1'" N7 SING N N 6 0FT "C5'" "C4'" SING N N 7 0FT C5A C5 SING N N 8 0FT "O4'" "C4'" SING N N 9 0FT "C3'" "C4'" SING N N 10 0FT "C3'" "O3'" SING N N 11 0FT C9 N7 SING Y N 12 0FT C9 C8 DOUB Y N 13 0FT N7 N6 SING Y N 14 0FT C5 C6 DOUB N N 15 0FT C5 C4 SING N N 16 0FT C6 N1 SING N N 17 0FT O4 C4 DOUB N N 18 0FT C4 N3 SING N N 19 0FT C8 C7 SING N N 20 0FT C8 N5 SING Y N 21 0FT N6 N5 DOUB Y N 22 0FT N1 C7 SING N N 23 0FT N1 C2 SING N N 24 0FT N3 C2 SING N N 25 0FT C2 O2 DOUB N N 26 0FT C6 H1 SING N N 27 0FT C7 H2 SING N N 28 0FT C7 H3 SING N N 29 0FT C9 H4 SING N N 30 0FT N3 H5 SING N N 31 0FT C5A H6 SING N N 32 0FT C5A H7 SING N N 33 0FT C5A H8 SING N N 34 0FT "C1'" H9 SING N N 35 0FT "C4'" H10 SING N N 36 0FT "C5'" H11 SING N N 37 0FT "C5'" H12 SING N N 38 0FT "O5'" H13 SING N N 39 0FT "C3'" H14 SING N N 40 0FT "O3'" H15 SING N N 41 0FT "C2'" H16 SING N N 42 0FT "O2'" H17 SING N N 43 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 0FT SMILES ACDLabs 12.01 "O=C1C(=CN(C(=O)N1)Cc2nnn(c2)C3OC(C(O)C3O)CO)C" 0FT InChI InChI 1.03 "InChI=1S/C13H17N5O6/c1-6-2-17(13(23)14-11(6)22)3-7-4-18(16-15-7)12-10(21)9(20)8(5-19)24-12/h2,4,8-10,12,19-21H,3,5H2,1H3,(H,14,22,23)/t8-,9-,10+,12+/m0/s1" 0FT InChIKey InChI 1.03 FVDUYFCPFLONHE-UXCLJVHYSA-N 0FT SMILES_CANONICAL CACTVS 3.370 "CC1=CN(Cc2cn(nn2)[C@@H]3O[C@@H](CO)[C@H](O)[C@H]3O)C(=O)NC1=O" 0FT SMILES CACTVS 3.370 "CC1=CN(Cc2cn(nn2)[CH]3O[CH](CO)[CH](O)[CH]3O)C(=O)NC1=O" 0FT SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "CC1=CN(C(=O)NC1=O)Cc2cn(nn2)[C@H]3[C@@H]([C@H]([C@@H](O3)CO)O)O" 0FT SMILES "OpenEye OEToolkits" 1.7.6 "CC1=CN(C(=O)NC1=O)Cc2cn(nn2)C3C(C(C(O3)CO)O)O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 0FT "SYSTEMATIC NAME" ACDLabs 12.01 "1-{[1-(alpha-L-arabinofuranosyl)-1H-1,2,3-triazol-4-yl]methyl}-5-methyl-2,4-dioxo-1,2,3,4-tetrahydropyrimidine" 0FT "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "1-[[1-[(2R,3R,4R,5S)-5-(hydroxymethyl)-3,4-bis(oxidanyl)oxolan-2-yl]-1,2,3-triazol-4-yl]methyl]-5-methyl-pyrimidine-2,4-dione" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 0FT "Create component" 2012-08-10 RCSB 0FT "Initial release" 2012-11-16 RCSB #