data_0G7 # _chem_comp.id 0G7 _chem_comp.name "D-phenylalanyl-N-[(3S)-6-carbamimidamido-1-chloro-2-oxohexan-3-yl]-L-prolinamide" _chem_comp.type peptide-like _chem_comp.pdbx_type HETAIN _chem_comp.formula "C21 H31 Cl N6 O3" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "d-Phe-Pro-Arg chloromethylketone (PPACK)" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2010-11-03 _chem_comp.pdbx_modified_date 2021-03-01 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 450.962 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 0G7 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 1HUT _chem_comp.pdbx_subcomponent_list "DPN PRO ARG 0QE" _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 0G7 N N N 0 1 N N N 31.449 47.504 26.711 -3.856 -0.846 1.972 N DPN 1 0G7 CA CA C 0 1 N N R 30.570 48.251 27.669 -3.715 -0.454 0.564 CA DPN 2 0G7 C C C 0 1 N N N 29.359 47.370 27.934 -2.274 -0.594 0.145 C DPN 3 0G7 O O O 0 1 N N N 29.521 46.164 28.051 -1.524 -1.301 0.783 O DPN 4 0G7 CB CB C 0 1 N N N 31.332 48.684 28.868 -4.590 -1.357 -0.308 CB DPN 5 0G7 CG CG C 0 1 Y N N 30.688 48.928 30.198 -6.041 -1.126 0.027 CG DPN 6 0G7 CD1 CD1 C 0 1 Y N N 30.161 50.183 30.502 -6.762 -0.163 -0.652 CD1 DPN 7 0G7 CD2 CD2 C 0 1 Y N N 30.732 47.954 31.201 -6.652 -1.882 1.010 CD2 DPN 8 0G7 CE1 CE1 C 0 1 Y N N 29.647 50.468 31.756 -8.093 0.049 -0.345 CE1 DPN 9 0G7 CE2 CE2 C 0 1 Y N N 30.216 48.216 32.468 -7.983 -1.670 1.317 CE2 DPN 10 0G7 CZ CZ C 0 1 Y N N 29.665 49.476 32.758 -8.703 -0.703 0.641 CZ DPN 11 0G7 N1 N1 N 0 1 N N N 28.184 47.938 27.920 -1.821 0.063 -0.941 N PRO 12 0G7 CA1 CA1 C 0 1 N N S 26.949 47.170 28.126 -0.448 0.012 -1.462 CA PRO 13 0G7 C1 C1 C 0 1 N N N 26.715 45.846 27.455 0.518 0.497 -0.411 C PRO 14 0G7 O1 O1 O 0 1 N N N 25.918 45.070 28.152 0.106 0.853 0.673 O PRO 15 0G7 CB1 CB1 C 0 1 N N N 25.812 48.222 27.972 -0.390 0.939 -2.694 CB PRO 16 0G7 CG1 CG1 C 0 1 N N N 26.443 49.566 27.837 -1.584 1.900 -2.461 CG PRO 17 0G7 CD CD C 0 1 N N N 27.945 49.393 27.773 -2.620 0.957 -1.799 CD PRO 18 0G7 N2 N2 N 0 1 N N N 27.161 45.328 26.381 1.839 0.535 -0.675 N ARG 19 0G7 CA2 CA2 C 0 1 N N S 26.843 43.993 25.875 2.777 1.006 0.346 CA ARG 20 0G7 C2 C2 C 0 1 N N N 25.369 43.581 25.840 2.869 2.509 0.289 C ARG 21 0G7 O2 O2 O 0 1 N N N 25.210 42.340 25.892 2.445 3.103 -0.673 O ARG 22 0G7 CB2 CB2 C 0 1 N N N 27.525 42.804 26.601 4.158 0.400 0.089 CB ARG 23 0G7 CG2 CG2 C 0 1 N N N 28.969 42.476 26.351 4.091 -1.118 0.270 CG ARG 24 0G7 CD3 CD3 C 0 1 N N N 29.313 41.116 25.856 5.472 -1.724 0.012 CD ARG 25 0G7 NE NE N 0 1 N N N 30.769 40.883 25.804 5.407 -3.178 0.186 NE ARG 26 0G7 CZ1 CZ1 C 0 1 N N N 31.396 39.733 26.050 6.536 -3.942 0.005 CZ ARG 27 0G7 NH1 NH1 N 0 1 N N N 30.671 38.653 26.379 7.724 -3.343 -0.339 NH1 ARG 28 0G7 NH2 NH2 N 0 1 N N N 32.722 39.582 26.010 6.478 -5.235 0.160 NH2 ARG 29 0G7 C3 C3 C 0 1 N N N 24.411 44.307 25.647 3.491 3.270 1.431 C1 0QE 30 0G7 CL1 CL1 CL 0 0 N Y N 22.971 43.320 25.357 3.455 5.035 1.067 CL1 0QE 31 0G7 HN HN H 0 1 N N N 32.262 48.050 26.508 -3.571 -1.804 2.111 H DPN 32 0G7 HNA HNA H 0 1 N N N 31.725 46.635 27.121 -3.339 -0.224 2.575 H2 DPN 33 0G7 HA HA H 0 1 N N N 30.203 49.202 27.254 -4.030 0.583 0.443 HA DPN 34 0G7 HB HB H 0 1 N N N 32.068 47.886 29.046 -4.418 -1.125 -1.359 HB2 DPN 35 0G7 HBA HBA H 0 1 N N N 31.789 49.645 28.588 -4.335 -2.400 -0.120 HB3 DPN 36 0G7 HD1 HD1 H 0 1 N N N 30.154 50.950 29.742 -6.286 0.425 -1.423 HD1 DPN 37 0G7 HD2 HD2 H 0 1 N N N 31.170 46.990 30.991 -6.090 -2.638 1.538 HD2 DPN 38 0G7 HE1 HE1 H 0 1 N N N 29.235 51.444 31.965 -8.657 0.802 -0.876 HE1 DPN 39 0G7 HE2 HE2 H 0 1 N N N 30.239 47.450 33.229 -8.461 -2.261 2.085 HE2 DPN 40 0G7 HZ HZ H 0 1 N N N 29.260 49.682 33.738 -9.743 -0.538 0.881 HZ DPN 41 0G7 HA1 HA1 H 0 1 N N N 27.015 46.709 29.122 -0.199 -1.009 -1.751 HA PRO 42 0G7 HB1 HB1 H 0 1 N N N 25.211 47.998 27.078 0.549 1.492 -2.718 HB2 PRO 43 0G7 HB1A HB1A H 0 0 N N N 25.159 48.201 28.857 -0.522 0.367 -3.613 HB3 PRO 44 0G7 HG1 HG1 H 0 1 N N N 26.178 50.189 28.704 -1.961 2.293 -3.406 HG2 PRO 45 0G7 H31 H31 H 0 1 N N N 26.086 50.053 26.918 -1.305 2.710 -1.787 HG3 PRO 46 0G7 HD HD H 0 1 N N N 28.438 49.953 28.581 -3.149 0.382 -2.559 HD2 PRO 47 0G7 H29 H29 H 0 1 N N N 28.340 49.759 26.814 -3.325 1.531 -1.197 HD3 PRO 48 0G7 HN2 HN2 H 0 1 N N N 27.786 45.885 25.833 2.168 0.250 -1.542 H ARG 49 0G7 HA2 HA2 H 0 1 N N N 27.235 44.151 24.860 2.425 0.701 1.332 HA ARG 50 0G7 HB2 HB2 H 0 1 N N N 27.449 43.025 27.676 4.472 0.630 -0.929 HB2 ARG 51 0G7 HB2A HB2A H 0 0 N N N 26.958 41.908 26.308 4.876 0.818 0.794 HB3 ARG 52 0G7 HG2 HG2 H 0 1 N N N 29.490 42.601 27.312 3.777 -1.349 1.288 HG2 ARG 53 0G7 HG2A HG2A H 0 0 N N N 29.325 43.186 25.590 3.373 -1.537 -0.435 HG3 ARG 54 0G7 HD3 HD3 H 0 1 N N N 28.906 41.002 24.840 6.190 -1.306 0.718 HD2 ARG 55 0G7 HD3A HD3A H 0 0 N N N 28.866 40.375 26.535 5.786 -1.494 -1.006 HD3 ARG 56 0G7 HNE HNE H 0 1 N N N 31.342 41.665 25.560 4.569 -3.600 0.429 HE ARG 57 0G7 HNH1 HNH1 H 0 0 N N N 31.128 37.787 26.580 7.767 -2.381 -0.454 HH11 ARG 58 0G7 HNHA HNHA H 0 0 N N N 29.674 38.715 26.423 8.520 -3.882 -0.467 HH12 ARG 59 0G7 HNH2 HNH2 H 0 0 N N N 33.000 38.649 26.240 7.274 -5.775 0.032 HH21 ARG 60 0G7 H3 H3 H 0 1 N N N 24.248 44.942 26.530 2.930 3.075 2.345 H 0QE 61 0G7 H3A H3A H 0 1 N N N 24.603 44.942 24.769 4.524 2.947 1.563 HA 0QE 62 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 0G7 C O DOUB N N 1 0G7 N CA SING N N 2 0G7 N HN SING N N 3 0G7 N HNA SING N N 4 0G7 C1 CA1 SING N N 5 0G7 C1 O1 DOUB N N 6 0G7 N1 C SING N N 7 0G7 N1 CA1 SING N N 8 0G7 C2 CA2 SING N N 9 0G7 C2 O2 DOUB N N 10 0G7 N2 C1 SING N N 11 0G7 N2 HN2 SING N N 12 0G7 C3 C2 SING N N 13 0G7 C3 CL1 SING N N 14 0G7 C3 H3 SING N N 15 0G7 C3 H3A SING N N 16 0G7 CA C SING N N 17 0G7 CA CB SING N N 18 0G7 CA HA SING N N 19 0G7 CB CG SING N N 20 0G7 CB HB SING N N 21 0G7 CB HBA SING N N 22 0G7 CD N1 SING N N 23 0G7 CD CG1 SING N N 24 0G7 NE CD3 SING N N 25 0G7 NE CZ1 SING N N 26 0G7 NE HNE SING N N 27 0G7 CG CD1 DOUB Y N 28 0G7 CG CD2 SING Y N 29 0G7 CZ HZ SING N N 30 0G7 CA1 HA1 SING N N 31 0G7 CA2 N2 SING N N 32 0G7 CA2 CB2 SING N N 33 0G7 CA2 HA2 SING N N 34 0G7 CB1 CA1 SING N N 35 0G7 CB1 HB1 SING N N 36 0G7 CB1 HB1A SING N N 37 0G7 CB2 HB2 SING N N 38 0G7 CB2 HB2A SING N N 39 0G7 CD1 CE1 SING Y N 40 0G7 CD1 HD1 SING N N 41 0G7 CD2 CE2 DOUB Y N 42 0G7 CD2 HD2 SING N N 43 0G7 CD3 CG2 SING N N 44 0G7 CD3 HD3 SING N N 45 0G7 CD3 HD3A SING N N 46 0G7 CE1 CZ DOUB Y N 47 0G7 CE1 HE1 SING N N 48 0G7 CE2 CZ SING Y N 49 0G7 CE2 HE2 SING N N 50 0G7 CG1 CB1 SING N N 51 0G7 CG2 CB2 SING N N 52 0G7 CG2 HG2 SING N N 53 0G7 CG2 HG2A SING N N 54 0G7 NH1 HNH1 SING N N 55 0G7 NH1 HNHA SING N N 56 0G7 NH2 CZ1 DOUB N N 57 0G7 NH2 HNH2 SING N N 58 0G7 CZ1 NH1 SING N N 59 0G7 CD HD SING N N 60 0G7 CD H29 SING N N 61 0G7 CG1 HG1 SING N N 62 0G7 CG1 H31 SING N N 63 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 0G7 SMILES ACDLabs 12.01 "O=C(NC(C(=O)CCl)CCCNC(=[N@H])N)C2N(C(=O)C(N)Cc1ccccc1)CCC2" 0G7 InChI InChI 1.03 "InChI=1S/C21H31ClN6O3/c22-13-18(29)16(8-4-10-26-21(24)25)27-19(30)17-9-5-11-28(17)20(31)15(23)12-14-6-2-1-3-7-14/h1-3,6-7,15-17H,4-5,8-13,23H2,(H,27,30)(H4,24,25,26)/t15-,16+,17+/m1/s1" 0G7 InChIKey InChI 1.03 KWPACVJPAFGBEQ-IKGGRYGDSA-N 0G7 SMILES_CANONICAL CACTVS 3.385 "N[C@H](Cc1ccccc1)C(=O)N2CCC[C@H]2C(=O)N[C@@H](CCCNC(N)=N)C(=O)CCl" 0G7 SMILES CACTVS 3.385 "N[CH](Cc1ccccc1)C(=O)N2CCC[CH]2C(=O)N[CH](CCCNC(N)=N)C(=O)CCl" 0G7 SMILES_CANONICAL "OpenEye OEToolkits" 1.7.5 "[H]/N=C(\N)/NCCC[C@@H](C(=O)CCl)NC(=O)[C@@H]1CCCN1C(=O)[C@@H](Cc2ccccc2)N" 0G7 SMILES "OpenEye OEToolkits" 1.7.5 "c1ccc(cc1)CC(C(=O)N2CCCC2C(=O)NC(CCCNC(=N)N)C(=O)CCl)N" # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 0G7 "SYSTEMATIC NAME" ACDLabs 12.01 "D-phenylalanyl-N-[(3S)-6-carbamimidamido-1-chloro-2-oxohexan-3-yl]-L-prolinamide" 0G7 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.0 "(2S)-1-[(2R)-2-azanyl-3-phenyl-propanoyl]-N-[(3S)-6-carbamimidamido-1-chloro-2-oxo-hexan-3-yl]pyrrolidine-2-carboxamide" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 0G7 "Create component" 2010-11-03 RCSB 0G7 "Modify aromatic_flag" 2011-06-04 RCSB 0G7 "Modify descriptor" 2011-06-04 RCSB 0G7 "Modify descriptor" 2012-01-05 RCSB 0G7 "Modify synonyms" 2021-03-01 PDBE # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id 0G7 _pdbx_chem_comp_synonyms.name "d-Phe-Pro-Arg chloromethylketone (PPACK)" _pdbx_chem_comp_synonyms.provenance ? _pdbx_chem_comp_synonyms.type ? ##