data_0JO
#
_chem_comp.id 0JO
_chem_comp.name "2-{[(E)-{3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methylidene]amino}prop-2-enoic acid"
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C11 H13 N2 O7 P"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2012-01-24
_chem_comp.pdbx_modified_date 2024-09-27
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 316.204
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code 0JO
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 4D9M
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site PDBJ
_chem_comp.pdbx_pcm Y
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
0JO O O O 0 1 N N N N N N 24.964 60.368 70.404 2.273 -2.447 -1.248 O 0JO 1
0JO C C C 0 1 N N N N N N 25.473 59.642 71.286 3.194 -2.585 -0.468 C 0JO 2
0JO OXT OXT O 0 1 N N N N N N 25.983 58.537 71.003 3.902 -3.730 -0.456 OXT 0JO 3
0JO CA CA C 0 1 N N N N N N 25.484 60.103 72.677 3.540 -1.493 0.466 CA 0JO 4
0JO CB CB C 0 1 N N N N N N 24.710 61.091 73.103 4.497 -1.679 1.393 CB 0JO 5
0JO N N N 0 1 N N N N N N 26.329 59.510 73.530 2.887 -0.293 0.387 N 0JO 6
0JO C4A C4A C 0 1 N N N N N N 25.962 58.693 74.428 1.587 -0.262 0.315 C4A 0JO 7
0JO C4 C4 C 0 1 Y N N N N N 26.958 58.058 75.344 0.891 1.020 0.114 C4 0JO 8
0JO C3 C3 C 0 1 Y N N N N N 28.119 57.479 74.844 1.610 2.222 -0.007 C3 0JO 9
0JO O3 O3 O 0 1 N N N N N N 28.382 57.483 73.505 2.966 2.226 0.057 O3 0JO 10
0JO C2 C2 C 0 1 Y N N N N N 29.023 56.897 75.722 0.909 3.405 -0.195 C2 0JO 11
0JO C2A C2A C 0 1 N N N N N N 30.286 56.271 75.204 1.662 4.703 -0.328 C2A 0JO 12
0JO N1 N1 N 0 1 Y N N N N N 28.793 56.876 77.052 -0.407 3.406 -0.260 N1 0JO 13
0JO C6 C6 C 0 1 Y N N N N N 27.686 57.420 77.558 -1.117 2.300 -0.150 C6 0JO 14
0JO C5 C5 C 0 1 Y N N N N N 26.752 58.019 76.719 -0.507 1.077 0.034 C5 0JO 15
0JO C5A C5A C 0 1 N N N N N N 25.531 58.626 77.354 -1.331 -0.179 0.152 C5A 0JO 16
0JO OP4 OP4 O 0 1 N N N N N N 24.405 57.770 77.218 -2.718 0.149 0.037 OP4 0JO 17
0JO P P P 0 1 N N N N N N 22.951 58.403 77.478 -3.889 -0.953 0.117 P 0JO 18
0JO OP3 OP3 O 0 1 N N N N N N 22.805 59.514 76.460 -3.759 -1.721 1.376 OP3 0JO 19
0JO OP1 OP1 O 0 1 N N N N N N 22.107 57.171 77.292 -5.321 -0.218 0.081 OP1 0JO 20
0JO OP2 OP2 O 0 1 N N N N N N 22.986 58.939 78.892 -3.769 -1.956 -1.138 OP2 0JO 21
0JO H1 H1 H 0 1 N N N N N N 25.908 58.383 70.069 3.641 -4.414 -1.088 H1 0JO 22
0JO H2 H2 H 0 1 N N N N N N 24.763 61.413 74.132 4.750 -0.881 2.076 H2 0JO 23
0JO H3 H3 H 0 1 N N N N N N 24.026 61.574 72.421 5.012 -2.626 1.456 H3 0JO 24
0JO H4 H4 H 0 1 N N N N N N 24.914 58.453 74.532 1.020 -1.176 0.402 H4 0JO 25
0JO H5 H5 H 0 1 N N N N N N 29.211 57.048 73.343 3.401 2.114 -0.799 H5 0JO 26
0JO H6 H6 H 0 1 N N N N N N 30.867 55.865 76.046 1.893 4.884 -1.378 H6 0JO 27
0JO H7 H7 H 0 1 N N N N N N 30.033 55.458 74.507 1.049 5.519 0.055 H7 0JO 28
0JO H8 H8 H 0 1 N N N N N N 30.883 57.031 74.679 2.589 4.646 0.243 H8 0JO 29
0JO H9 H9 H 0 1 N N N N N N 27.514 57.396 78.624 -2.194 2.352 -0.209 H9 0JO 30
0JO H10 H10 H 0 1 N N N N N N 25.728 58.794 78.423 -1.055 -0.871 -0.644 H10 0JO 31
0JO H11 H11 H 0 1 N N N N N N 25.313 59.587 76.866 -1.147 -0.645 1.119 H11 0JO 32
0JO H12 H12 H 0 1 N N N N N N 21.569 57.270 76.515 -6.074 -0.823 0.126 H12 0JO 33
0JO H13 H13 H 0 1 N N N N N N 22.909 59.886 78.874 -3.845 -1.520 -1.998 H13 0JO 34
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
0JO O C DOUB N N 1
0JO OXT C SING N N 2
0JO C CA SING N N 3
0JO CA CB DOUB N N 4
0JO CA N SING N N 5
0JO O3 C3 SING N N 6
0JO N C4A DOUB N N 7
0JO C4A C4 SING N N 8
0JO C3 C4 DOUB Y N 9
0JO C3 C2 SING Y N 10
0JO C2A C2 SING N N 11
0JO C4 C5 SING Y N 12
0JO C2 N1 DOUB Y N 13
0JO OP3 P DOUB N N 14
0JO C5 C5A SING N N 15
0JO C5 C6 DOUB Y N 16
0JO N1 C6 SING Y N 17
0JO OP4 C5A SING N N 18
0JO OP4 P SING N N 19
0JO OP1 P SING N N 20
0JO P OP2 SING N N 21
0JO OXT H1 SING N N 22
0JO CB H2 SING N N 23
0JO CB H3 SING N N 24
0JO C4A H4 SING N N 25
0JO O3 H5 SING N N 26
0JO C2A H6 SING N N 27
0JO C2A H7 SING N N 28
0JO C2A H8 SING N N 29
0JO C6 H9 SING N N 30
0JO C5A H10 SING N N 31
0JO C5A H11 SING N N 32
0JO OP1 H12 SING N N 33
0JO OP2 H13 SING N N 34
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
0JO SMILES ACDLabs 12.01 "O=P(O)(O)OCc1cnc(c(O)c1/C=N/C(=C)C(=O)O)C"
0JO InChI InChI 1.03 "InChI=1S/C11H13N2O7P/c1-6-10(14)9(4-13-7(2)11(15)16)8(3-12-6)5-20-21(17,18)19/h3-4,14H,2,5H2,1H3,(H,15,16)(H2,17,18,19)/b13-4+"
0JO InChIKey InChI 1.03 BHIGINKEEFZJGX-YIXHJXPBSA-N
0JO SMILES_CANONICAL CACTVS 3.370 "Cc1ncc(CO[P](O)(O)=O)c(C=NC(=C)C(O)=O)c1O"
0JO SMILES CACTVS 3.370 "Cc1ncc(CO[P](O)(O)=O)c(C=NC(=C)C(O)=O)c1O"
0JO SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "Cc1c(c(c(cn1)COP(=O)(O)O)/C=N/C(=C)C(=O)O)O"
0JO SMILES "OpenEye OEToolkits" 1.7.6 "Cc1c(c(c(cn1)COP(=O)(O)O)C=NC(=C)C(=O)O)O"
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
0JO "SYSTEMATIC NAME" ACDLabs 12.01 "2-{[(E)-{3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methylidene]amino}prop-2-enoic acid"
0JO "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "2-[(E)-[2-methyl-3-oxidanyl-5-(phosphonooxymethyl)pyridin-4-yl]methylideneamino]prop-2-enoic acid"
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
0JO "Create component" 2012-01-24 PDBJ
0JO "Modify PCM" 2024-09-27 PDBE
#
_pdbx_chem_comp_pcm.pcm_id 1
_pdbx_chem_comp_pcm.comp_id 0JO
_pdbx_chem_comp_pcm.modified_residue_id LYS
_pdbx_chem_comp_pcm.type None
_pdbx_chem_comp_pcm.category "Covalent chemical modification"
_pdbx_chem_comp_pcm.position "Amino-acid side chain"
_pdbx_chem_comp_pcm.polypeptide_position "Any position"
_pdbx_chem_comp_pcm.comp_id_linking_atom C4A
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom NZ
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession ?
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession ?
#