data_0OA # _chem_comp.id 0OA _chem_comp.name ;(1R,2S,3R,4S,6S)-6-(cyclohexylmethoxy)-2,3,4-trihydroxycyclohexyl (2R)-2-methoxy-3-(octadecyloxy)propyl hydrogen (S)-phosphate ; _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C35 H69 O10 P" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "phosphatidylinositol ether lipid analogue 24 (PIA24)" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2012-03-30 _chem_comp.pdbx_modified_date 2020-06-17 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 680.890 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 0OA _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag Y _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 4E8A _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 0OA O15 O15 O 0 1 N N N -2.464 6.233 -37.374 -6.486 -3.427 -0.235 O15 0OA 1 0OA P12 P12 P 0 1 N N N -2.799 5.681 -38.727 -6.194 -2.022 0.494 P12 0OA 2 0OA O14 O14 O 0 1 N N N -2.481 4.238 -39.027 -6.273 -2.202 1.961 O14 0OA 3 0OA O13 O13 O 0 1 N N N -4.347 5.953 -39.052 -4.721 -1.507 0.096 O13 0OA 4 0OA C16 C16 C 0 1 N N N -5.339 5.472 -38.135 -3.528 -2.199 0.468 C16 0OA 5 0OA C17 C17 C 0 1 N N R -4.709 4.758 -36.933 -2.311 -1.442 -0.069 C17 0OA 6 0OA O22 O22 O 0 1 N N N -5.325 3.480 -36.738 -2.330 -1.462 -1.497 O22 0OA 7 0OA C23 C23 C 0 1 N N N -5.847 3.353 -35.402 -1.725 -0.317 -2.103 C23 0OA 8 0OA C18 C18 C 0 1 N N N -4.883 5.593 -35.665 -1.031 -2.112 0.434 C18 0OA 9 0OA O19 O19 O 0 1 N N N -6.238 5.601 -35.219 0.101 -1.339 0.030 O19 0OA 10 0OA C20 C20 C 0 1 N N N -6.354 5.497 -33.795 1.355 -1.881 0.451 C20 0OA 11 0OA C21 C21 C 0 1 N N N -7.264 4.346 -33.402 2.490 -0.977 -0.034 C21 0OA 12 0OA O11 O11 O 0 1 N N N -2.007 6.584 -39.783 -7.287 -0.937 0.027 O11 0OA 13 0OA C4 C4 C 0 1 N N R -0.586 6.540 -39.673 -8.679 -1.054 0.329 C4 0OA 14 0OA C3 C3 C 0 1 N N S 0.054 7.515 -40.655 -9.480 -1.113 -0.973 C3 0OA 15 0OA O7 O7 O 0 1 N N N -0.129 8.858 -40.194 -9.062 -2.244 -1.739 O7 0OA 16 0OA C2 C2 C 0 1 N N R 1.532 7.184 -40.727 -10.970 -1.238 -0.649 C2 0OA 17 0OA O8 O8 O 0 1 N N N 2.318 8.221 -41.341 -11.719 -1.293 -1.865 O8 0OA 18 0OA C5 C5 C 0 1 N N S -0.248 5.068 -39.887 -9.126 0.158 1.149 C5 0OA 19 0OA C6 C6 C 0 1 N N N 1.071 4.772 -40.614 -10.616 0.032 1.473 C6 0OA 20 0OA C1 C1 C 0 1 N N S 1.611 5.885 -41.497 -11.418 -0.026 0.171 C1 0OA 21 0OA O9 O9 O 0 1 N N N 2.962 5.627 -41.880 -12.810 -0.144 0.473 O9 0OA 22 0OA O10 O10 O 0 1 N N N -1.386 4.538 -40.577 -8.901 1.352 0.397 O10 0OA 23 0OA H1 H1 H 0 1 N N N -2.066 5.553 -36.844 -6.451 -3.384 -1.201 H1 0OA 24 0OA H2 H2 H 0 1 N N N -5.931 6.325 -37.772 -3.467 -2.260 1.555 H2 0OA 25 0OA H3 H3 H 0 1 N N N -5.998 4.767 -38.662 -3.544 -3.204 0.048 H3 0OA 26 0OA H4 H4 H 0 1 N N N -3.633 4.631 -37.125 -2.342 -0.410 0.281 H4 0OA 27 0OA H5 H5 H 0 1 N N N -6.313 2.364 -35.282 -1.780 -0.408 -3.187 H5 0OA 28 0OA H6 H6 H 0 1 N N N -5.028 3.462 -34.676 -2.253 0.583 -1.786 H6 0OA 29 0OA H7 H7 H 0 1 N N N -6.599 4.136 -35.226 -0.681 -0.253 -1.796 H7 0OA 30 0OA H8 H8 H 0 1 N N N -4.249 5.171 -34.871 -1.058 -2.177 1.522 H8 0OA 31 0OA H9 H9 H 0 1 N N N -4.570 6.627 -35.874 -0.956 -3.114 0.012 H9 0OA 32 0OA H10 H10 H 0 1 N N N -5.356 5.329 -33.365 1.378 -1.941 1.539 H10 0OA 33 0OA H11 H11 H 0 1 N N N -6.770 6.435 -33.399 1.479 -2.879 0.030 H11 0OA 34 0OA H12 H12 H 0 1 N N N -8.322 4.610 -33.547 2.467 -0.917 -1.122 H12 0OA 35 0OA H13 H13 H 0 1 N N N -7.030 3.440 -33.980 2.365 0.020 0.387 H13 0OA 36 0OA H15 H15 H 0 1 N N N -0.282 6.822 -38.654 -8.851 -1.964 0.903 H15 0OA 37 0OA H16 H16 H 0 1 N N N -0.400 7.381 -41.648 -9.309 -0.202 -1.547 H16 0OA 38 0OA H17 H17 H 0 1 N N N 0.271 9.462 -40.809 -9.530 -2.345 -2.579 H17 0OA 39 0OA H18 H18 H 0 1 N N N 1.897 7.005 -39.705 -11.142 -2.149 -0.075 H18 0OA 40 0OA H19 H19 H 0 1 N N N 3.231 7.959 -41.358 -12.674 -1.373 -1.736 H19 0OA 41 0OA H20 H20 H 0 1 N N N -0.188 4.596 -38.895 -8.555 0.200 2.077 H20 0OA 42 0OA H21 H21 H 0 1 N N N 1.832 4.548 -39.852 -10.788 -0.878 2.047 H21 0OA 43 0OA H22 H22 H 0 1 N N N 0.915 3.886 -41.247 -10.935 0.896 2.057 H22 0OA 44 0OA H23 H23 H 0 1 N N N 0.976 5.964 -42.392 -11.246 0.884 -0.403 H23 0OA 45 0OA H24 H24 H 0 1 N N N 3.004 4.810 -42.363 -13.163 0.592 0.993 H24 0OA 46 0OA C7 C7 C 0 1 N N N ? ? ? -8.625 2.501 1.200 C7 0OA 47 0OA C13 C13 C 0 1 N N N ? ? ? 3.832 -1.557 0.417 C13 0OA 48 0OA C14 C14 C 0 1 N N N ? ? ? 4.967 -0.653 -0.068 C14 0OA 49 0OA C15 C15 C 0 1 N N N ? ? ? 6.309 -1.233 0.382 C15 0OA 50 0OA C19 C19 C 0 1 N N N ? ? ? 7.444 -0.329 -0.103 C19 0OA 51 0OA C22 C22 C 0 1 N N N ? ? ? 8.786 -0.910 0.348 C22 0OA 52 0OA C24 C24 C 0 1 N N N ? ? ? 9.921 -0.006 -0.137 C24 0OA 53 0OA C25 C25 C 0 1 N N N ? ? ? 11.264 -0.586 0.313 C25 0OA 54 0OA C26 C26 C 0 1 N N N ? ? ? 12.399 0.318 -0.172 C26 0OA 55 0OA C27 C27 C 0 1 N N N ? ? ? 13.741 -0.262 0.279 C27 0OA 56 0OA C28 C28 C 0 1 N N N ? ? ? 14.876 0.642 -0.206 C28 0OA 57 0OA C29 C29 C 0 1 N N N ? ? ? 16.218 0.062 0.245 C29 0OA 58 0OA C30 C30 C 0 1 N N N ? ? ? 17.353 0.966 -0.241 C30 0OA 59 0OA C31 C31 C 0 1 N N N ? ? ? 18.695 0.386 0.210 C31 0OA 60 0OA C32 C32 C 0 1 N N N ? ? ? 19.830 1.290 -0.275 C32 0OA 61 0OA C33 C33 C 0 1 N N N ? ? ? 21.172 0.710 0.176 C33 0OA 62 0OA C34 C34 C 0 1 N N N ? ? ? 22.307 1.614 -0.310 C34 0OA 63 0OA H35 H35 H 0 1 N N N ? ? ? 3.855 -1.617 1.505 H35 0OA 64 0OA H36 H36 H 0 1 N N N ? ? ? 3.957 -2.555 -0.005 H36 0OA 65 0OA H37 H37 H 0 1 N N N ? ? ? 4.944 -0.594 -1.157 H37 0OA 66 0OA H38 H38 H 0 1 N N N ? ? ? 4.843 0.344 0.353 H38 0OA 67 0OA H39 H39 H 0 1 N N N ? ? ? 6.332 -1.293 1.470 H39 0OA 68 0OA H40 H40 H 0 1 N N N ? ? ? 6.434 -2.231 -0.039 H40 0OA 69 0OA H41 H41 H 0 1 N N N ? ? ? 7.421 -0.270 -1.191 H41 0OA 70 0OA H42 H42 H 0 1 N N N ? ? ? 7.320 0.668 0.318 H42 0OA 71 0OA H43 H43 H 0 1 N N N ? ? ? 8.809 -0.969 1.436 H43 0OA 72 0OA H44 H44 H 0 1 N N N ? ? ? 8.911 -1.907 -0.073 H44 0OA 73 0OA H45 H45 H 0 1 N N N ? ? ? 9.898 0.054 -1.225 H45 0OA 74 0OA H46 H46 H 0 1 N N N ? ? ? 9.797 0.992 0.284 H46 0OA 75 0OA H47 H47 H 0 1 N N N ? ? ? 11.286 -0.645 1.401 H47 0OA 76 0OA H48 H48 H 0 1 N N N ? ? ? 11.388 -1.583 -0.108 H48 0OA 77 0OA H49 H49 H 0 1 N N N ? ? ? 12.376 0.378 -1.260 H49 0OA 78 0OA H50 H50 H 0 1 N N N ? ? ? 12.274 1.316 0.250 H50 0OA 79 0OA H51 H51 H 0 1 N N N ? ? ? 13.764 -0.322 1.367 H51 0OA 80 0OA H52 H52 H 0 1 N N N ? ? ? 13.865 -1.259 -0.142 H52 0OA 81 0OA H53 H53 H 0 1 N N N ? ? ? 14.853 0.702 -1.294 H53 0OA 82 0OA H54 H54 H 0 1 N N N ? ? ? 14.751 1.640 0.215 H54 0OA 83 0OA H55 H55 H 0 1 N N N ? ? ? 16.241 0.002 1.333 H55 0OA 84 0OA H56 H56 H 0 1 N N N ? ? ? 16.342 -0.936 -0.177 H56 0OA 85 0OA H57 H57 H 0 1 N N N ? ? ? 17.330 1.026 -1.329 H57 0OA 86 0OA H58 H58 H 0 1 N N N ? ? ? 17.228 1.963 0.181 H58 0OA 87 0OA H59 H59 H 0 1 N N N ? ? ? 18.718 0.326 1.298 H59 0OA 88 0OA H60 H60 H 0 1 N N N ? ? ? 18.819 -0.612 -0.211 H60 0OA 89 0OA H61 H61 H 0 1 N N N ? ? ? 19.807 1.349 -1.363 H61 0OA 90 0OA H62 H62 H 0 1 N N N ? ? ? 19.705 2.287 0.146 H62 0OA 91 0OA C8 C8 C 0 1 N N N ? ? ? -8.401 3.714 0.294 C8 0OA 92 0OA C9 C9 C 0 1 N N N ? ? ? -8.229 4.968 1.154 C9 0OA 93 0OA C10 C10 C 0 1 N N N ? ? ? -8.005 6.180 0.248 C10 0OA 94 0OA C11 C11 C 0 1 N N N ? ? ? -6.747 5.963 -0.595 C11 0OA 95 0OA C12 C12 C 0 1 N N N ? ? ? -6.919 4.709 -1.454 C12 0OA 96 0OA C35 C35 C 0 1 N N N ? ? ? -7.143 3.496 -0.549 C35 0OA 97 0OA H14 H14 H 0 1 N N N ? ? ? -9.468 2.693 1.862 H14 0OA 98 0OA H25 H25 H 0 1 N N N ? ? ? -7.729 2.322 1.794 H25 0OA 99 0OA H541 H541 H 0 0 N N N ? ? ? 21.195 0.650 1.264 H541 0OA 100 0OA H551 H551 H 0 0 N N N ? ? ? 21.297 -0.288 -0.246 H551 0OA 101 0OA H561 H561 H 0 0 N N N ? ? ? 22.284 1.673 -1.398 H561 0OA 102 0OA H571 H571 H 0 0 N N N ? ? ? 22.183 2.611 0.112 H571 0OA 103 0OA H581 H581 H 0 0 N N N ? ? ? 23.263 1.200 0.012 H581 0OA 104 0OA H591 H591 H 0 0 N N N ? ? ? -9.262 3.840 -0.363 H591 0OA 105 0OA H601 H601 H 0 0 N N N ? ? ? -9.125 5.122 1.754 H601 0OA 106 0OA H611 H611 H 0 0 N N N ? ? ? -7.369 4.842 1.811 H611 0OA 107 0OA H621 H621 H 0 0 N N N ? ? ? -8.866 6.306 -0.409 H621 0OA 108 0OA H63 H63 H 0 1 N N N ? ? ? -7.883 7.074 0.861 H63 0OA 109 0OA H64 H64 H 0 1 N N N ? ? ? -6.588 6.827 -1.240 H64 0OA 110 0OA H65 H65 H 0 1 N N N ? ? ? -5.887 5.837 0.063 H65 0OA 111 0OA H66 H66 H 0 1 N N N ? ? ? -7.780 4.835 -2.112 H66 0OA 112 0OA H67 H67 H 0 1 N N N ? ? ? -6.023 4.554 -2.055 H67 0OA 113 0OA H68 H68 H 0 1 N N N ? ? ? -6.283 3.371 0.109 H68 0OA 114 0OA H69 H69 H 0 1 N N N ? ? ? -7.266 2.603 -1.161 H69 0OA 115 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 0OA O15 H1 SING N N 1 0OA P12 O15 SING N N 2 0OA O14 P12 DOUB N N 3 0OA O13 P12 SING N N 4 0OA O13 C16 SING N N 5 0OA C16 C17 SING N N 6 0OA C16 H2 SING N N 7 0OA C16 H3 SING N N 8 0OA C17 O22 SING N N 9 0OA C17 C18 SING N N 10 0OA C17 H4 SING N N 11 0OA O22 C23 SING N N 12 0OA C23 H5 SING N N 13 0OA C23 H6 SING N N 14 0OA C23 H7 SING N N 15 0OA C18 O19 SING N N 16 0OA C18 H8 SING N N 17 0OA C18 H9 SING N N 18 0OA O19 C20 SING N N 19 0OA C20 C21 SING N N 20 0OA C20 H10 SING N N 21 0OA C20 H11 SING N N 22 0OA C21 H12 SING N N 23 0OA C21 H13 SING N N 24 0OA C21 C13 SING N N 25 0OA O11 C4 SING N N 26 0OA O11 P12 SING N N 27 0OA C4 H15 SING N N 28 0OA C3 O7 SING N N 29 0OA C3 C4 SING N N 30 0OA C3 H16 SING N N 31 0OA O7 H17 SING N N 32 0OA C2 C3 SING N N 33 0OA C2 H18 SING N N 34 0OA O8 C2 SING N N 35 0OA O8 H19 SING N N 36 0OA C5 C4 SING N N 37 0OA C5 H20 SING N N 38 0OA C6 C5 SING N N 39 0OA C6 H21 SING N N 40 0OA C6 H22 SING N N 41 0OA C1 C2 SING N N 42 0OA C1 C6 SING N N 43 0OA C1 H23 SING N N 44 0OA O9 C1 SING N N 45 0OA O9 H24 SING N N 46 0OA O10 C5 SING N N 47 0OA O10 C7 SING N N 48 0OA C7 C8 SING N N 49 0OA C7 H14 SING N N 50 0OA C7 H25 SING N N 51 0OA C13 C14 SING N N 52 0OA C13 H35 SING N N 53 0OA C13 H36 SING N N 54 0OA C14 C15 SING N N 55 0OA C14 H37 SING N N 56 0OA C14 H38 SING N N 57 0OA C15 C19 SING N N 58 0OA C15 H39 SING N N 59 0OA C15 H40 SING N N 60 0OA C19 C22 SING N N 61 0OA C19 H41 SING N N 62 0OA C19 H42 SING N N 63 0OA C22 C24 SING N N 64 0OA C22 H43 SING N N 65 0OA C22 H44 SING N N 66 0OA C24 C25 SING N N 67 0OA C24 H45 SING N N 68 0OA C24 H46 SING N N 69 0OA C25 C26 SING N N 70 0OA C25 H47 SING N N 71 0OA C25 H48 SING N N 72 0OA C26 C27 SING N N 73 0OA C26 H49 SING N N 74 0OA C26 H50 SING N N 75 0OA C27 C28 SING N N 76 0OA C27 H51 SING N N 77 0OA C27 H52 SING N N 78 0OA C28 C29 SING N N 79 0OA C28 H53 SING N N 80 0OA C28 H54 SING N N 81 0OA C29 C30 SING N N 82 0OA C29 H55 SING N N 83 0OA C29 H56 SING N N 84 0OA C30 C31 SING N N 85 0OA C30 H57 SING N N 86 0OA C30 H58 SING N N 87 0OA C31 C32 SING N N 88 0OA C31 H59 SING N N 89 0OA C31 H60 SING N N 90 0OA C32 C33 SING N N 91 0OA C32 H61 SING N N 92 0OA C32 H62 SING N N 93 0OA C33 C34 SING N N 94 0OA C8 C9 SING N N 95 0OA C9 C10 SING N N 96 0OA C10 C11 SING N N 97 0OA C11 C12 SING N N 98 0OA C12 C35 SING N N 99 0OA C35 C8 SING N N 100 0OA C33 H541 SING N N 101 0OA C33 H551 SING N N 102 0OA C34 H561 SING N N 103 0OA C34 H571 SING N N 104 0OA C34 H581 SING N N 105 0OA C8 H591 SING N N 106 0OA C9 H601 SING N N 107 0OA C9 H611 SING N N 108 0OA C10 H621 SING N N 109 0OA C10 H63 SING N N 110 0OA C11 H64 SING N N 111 0OA C11 H65 SING N N 112 0OA C12 H66 SING N N 113 0OA C12 H67 SING N N 114 0OA C35 H68 SING N N 115 0OA C35 H69 SING N N 116 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 0OA SMILES ACDLabs 12.01 "O=P(O)(OC2C(OCC1CCCCC1)CC(O)C(O)C2O)OCC(OC)COCCCCCCCCCCCCCCCCCC" 0OA InChI InChI 1.03 "InChI=1S/C35H69O10P/c1-3-4-5-6-7-8-9-10-11-12-13-14-15-16-17-21-24-42-27-30(41-2)28-44-46(39,40)45-35-32(25-31(36)33(37)34(35)38)43-26-29-22-19-18-20-23-29/h29-38H,3-28H2,1-2H3,(H,39,40)/t30-,31+,32+,33-,34+,35+/m1/s1" 0OA InChIKey InChI 1.03 WBYCFPKMFURULR-VYXDPQKESA-N 0OA SMILES_CANONICAL CACTVS 3.370 "CCCCCCCCCCCCCCCCCCOC[C@H](CO[P](O)(=O)O[C@@H]1[C@@H](O)[C@H](O)[C@@H](O)C[C@@H]1OCC2CCCCC2)OC" 0OA SMILES CACTVS 3.370 "CCCCCCCCCCCCCCCCCCOC[CH](CO[P](O)(=O)O[CH]1[CH](O)[CH](O)[CH](O)C[CH]1OCC2CCCCC2)OC" 0OA SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "CCCCCCCCCCCCCCCCCCOCC(COP(=O)(O)OC1C(CC(C(C1O)O)O)OCC2CCCCC2)OC" 0OA SMILES "OpenEye OEToolkits" 1.7.6 "CCCCCCCCCCCCCCCCCCOCC(COP(=O)(O)OC1C(CC(C(C1O)O)O)OCC2CCCCC2)OC" # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 0OA "SYSTEMATIC NAME" ACDLabs 12.01 "(1R,2S,3R,4S,6S)-6-(cyclohexylmethoxy)-2,3,4-trihydroxycyclohexyl (2R)-2-methoxy-3-(octadecyloxy)propyl hydrogen (S)-phosphate" 0OA "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "[6-(cyclohexylmethoxy)-2,3,4-tris(oxidanyl)cyclohexyl] (2-methoxy-3-octadecoxy-propyl) hydrogen phosphate" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 0OA "Create component" 2012-03-30 RCSB 0OA "Other modification" 2012-05-08 RCSB 0OA "Initial release" 2012-10-26 RCSB 0OA "Modify synonyms" 2020-06-05 PDBE # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id 0OA _pdbx_chem_comp_synonyms.name "phosphatidylinositol ether lipid analogue 24 (PIA24)" _pdbx_chem_comp_synonyms.provenance ? _pdbx_chem_comp_synonyms.type ? ##