data_0QJ # _chem_comp.id 0QJ _chem_comp.name "5'-[(3-{[(4-tert-butylphenyl)carbamoyl]amino}propyl)(methyl)amino]-5'-deoxyadenosine" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C25 H36 N8 O4" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2012-04-12 _chem_comp.pdbx_modified_date 2012-10-12 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 512.605 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 0QJ _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 4EKG _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 0QJ C2 C2 C 0 1 Y N N 17.874 -61.069 12.742 7.879 2.566 -1.836 C2 0QJ 1 0QJ C4 C4 C 0 1 Y N N 18.823 -63.250 12.648 6.628 1.272 -0.407 C4 0QJ 2 0QJ C5 C5 C 0 1 Y N N 17.623 -63.802 12.846 7.347 1.797 0.680 C5 0QJ 3 0QJ C6 C6 C 0 1 Y N N 16.546 -63.018 13.000 8.352 2.743 0.417 C6 0QJ 4 0QJ C8 C8 C 0 1 Y N N 19.061 -65.404 12.653 5.904 0.389 1.480 C8 0QJ 5 0QJ CBA CBA C 0 1 N N N 21.973 -68.472 -0.791 -10.552 2.051 -1.961 CBA 0QJ 6 0QJ CAZ CAZ C 0 1 N N N 22.944 -67.360 -1.151 -10.512 0.987 -0.862 CAZ 0QJ 7 0QJ CBB CBB C 0 1 N N N 22.385 -66.539 -2.315 -11.475 1.377 0.261 CBB 0QJ 8 0QJ CBC CBC C 0 1 N N N 24.226 -68.020 -1.648 -10.929 -0.364 -1.445 CBC 0QJ 9 0QJ CAY CAY C 0 1 Y N N 23.182 -66.530 -0.019 -9.112 0.886 -0.312 CAY 0QJ 10 0QJ CBD CBD C 0 1 Y N N 24.441 -66.522 0.612 -8.423 -0.309 -0.395 CBD 0QJ 11 0QJ CBE CBE C 0 1 Y N N 24.677 -65.711 1.719 -7.140 -0.405 0.108 CBE 0QJ 12 0QJ CAX CAX C 0 1 Y N N 22.173 -65.683 0.481 -8.519 1.991 0.270 CAX 0QJ 13 0QJ CAW CAW C 0 1 Y N N 22.406 -64.865 1.588 -7.236 1.902 0.775 CAW 0QJ 14 0QJ CAV CAV C 0 1 Y N N 23.659 -64.879 2.226 -6.543 0.701 0.698 CAV 0QJ 15 0QJ NAU NAU N 0 1 N N N 23.871 -64.057 3.282 -5.243 0.608 1.209 NAU 0QJ 16 0QJ CAT CAT C 0 1 N N N 24.686 -64.438 4.279 -4.342 -0.198 0.614 CAT 0QJ 17 0QJ OBF OBF O 0 1 N N N 25.224 -65.550 4.306 -4.628 -0.772 -0.419 OBF 0QJ 18 0QJ NAS NAS N 0 1 N N N 24.892 -63.547 5.255 -3.124 -0.369 1.164 NAS 0QJ 19 0QJ CAR CAR C 0 1 N N N 25.689 -63.878 6.448 -2.143 -1.245 0.518 CAR 0QJ 20 0QJ CAQ CAQ C 0 1 N N N 25.128 -65.221 6.967 -0.854 -1.262 1.341 CAQ 0QJ 21 0QJ CAP CAP C 0 1 N N N 24.668 -65.159 8.420 0.170 -2.177 0.665 CAP 0QJ 22 0QJ NAN NAN N 0 1 N N N 23.211 -65.358 8.621 1.408 -2.194 1.455 NAN 0QJ 23 0QJ CAO CAO C 0 1 N N N 22.497 -66.211 7.662 1.189 -2.822 2.765 CAO 0QJ 24 0QJ CAM CAM C 0 1 N N N 22.975 -65.825 9.996 2.490 -2.866 0.724 CAM 0QJ 25 0QJ CAL CAL C 0 1 N N R 22.812 -64.588 10.897 3.024 -1.935 -0.366 CAL 0QJ 26 0QJ OBG OBG O 0 1 N N N 21.422 -64.318 10.974 3.645 -0.785 0.233 OBG 0QJ 27 0QJ CAJ CAJ C 0 1 N N S 23.281 -64.853 12.303 4.105 -2.660 -1.192 CAJ 0QJ 28 0QJ OAK OAK O 0 1 N N N 24.111 -63.751 12.666 3.717 -2.737 -2.565 OAK 0QJ 29 0QJ CAH CAH C 0 1 N N R 22.006 -64.839 13.126 5.363 -1.773 -1.032 CAH 0QJ 30 0QJ OAI OAI O 0 1 N N N 22.211 -64.187 14.392 6.067 -1.659 -2.271 OAI 0QJ 31 0QJ CAG CAG C 0 1 N N R 21.139 -63.957 12.311 4.750 -0.412 -0.617 CAG 0QJ 32 0QJ N9 N9 N 0 1 Y N N 19.702 -64.242 12.538 5.726 0.388 0.128 N9 0QJ 33 0QJ N7 N7 N 0 1 Y N N 17.779 -65.129 12.843 6.856 1.217 1.801 N7 0QJ 34 0QJ N3 N3 N 0 1 Y N N 18.986 -61.908 12.598 6.926 1.682 -1.636 N3 0QJ 35 0QJ N1 N1 N 0 1 Y N N 16.626 -61.678 12.954 8.582 3.088 -0.846 N1 0QJ 36 0QJ N6 N6 N 0 1 N N N 15.377 -63.628 13.180 9.093 3.295 1.447 N6 0QJ 37 0QJ H1 H1 H 0 1 N N N 17.972 -59.995 12.692 8.099 2.875 -2.847 H1 0QJ 38 0QJ H2 H2 H 0 1 N N N 19.504 -66.388 12.601 5.339 -0.207 2.180 H2 0QJ 39 0QJ H3 H3 H 0 1 N N N 22.380 -69.058 0.046 -9.866 1.773 -2.761 H3 0QJ 40 0QJ H4 H4 H 0 1 N N N 21.008 -68.035 -0.497 -11.564 2.124 -2.359 H4 0QJ 41 0QJ H5 H5 H 0 1 N N N 21.828 -69.128 -1.662 -10.255 3.014 -1.545 H5 0QJ 42 0QJ H6 H6 H 0 1 N N N 21.455 -66.042 -2.001 -12.487 1.449 -0.137 H6 0QJ 43 0QJ H7 H7 H 0 1 N N N 23.122 -65.780 -2.616 -11.446 0.618 1.044 H7 0QJ 44 0QJ H8 H8 H 0 1 N N N 22.176 -67.204 -3.166 -11.177 2.339 0.677 H8 0QJ 45 0QJ H9 H9 H 0 1 N N N 24.665 -68.624 -0.840 -10.243 -0.642 -2.246 H9 0QJ 46 0QJ H10 H10 H 0 1 N N N 23.996 -68.668 -2.506 -10.900 -1.123 -0.663 H10 0QJ 47 0QJ H11 H11 H 0 1 N N N 24.942 -67.244 -1.956 -11.941 -0.292 -1.843 H11 0QJ 48 0QJ H12 H12 H 0 1 N N N 25.232 -67.152 0.233 -8.888 -1.169 -0.854 H12 0QJ 49 0QJ H13 H13 H 0 1 N N N 25.648 -65.720 2.193 -6.602 -1.339 0.042 H13 0QJ 50 0QJ H14 H14 H 0 1 N N N 21.206 -65.666 0.001 -9.058 2.925 0.330 H14 0QJ 51 0QJ H15 H15 H 0 1 N N N 21.622 -64.220 1.955 -6.773 2.766 1.229 H15 0QJ 52 0QJ H16 H16 H 0 1 N N N 23.420 -63.165 3.319 -4.992 1.123 1.991 H16 0QJ 53 0QJ H17 H17 H 0 1 N N N 24.495 -62.633 5.172 -2.895 0.089 1.989 H17 0QJ 54 0QJ H18 H18 H 0 1 N N N 26.751 -63.983 6.182 -2.547 -2.255 0.453 H18 0QJ 55 0QJ H19 H19 H 0 1 N N N 25.578 -63.095 7.213 -1.930 -0.873 -0.485 H19 0QJ 56 0QJ H20 H20 H 0 1 N N N 24.270 -65.507 6.341 -0.451 -0.252 1.406 H20 0QJ 57 0QJ H21 H21 H 0 1 N N N 25.915 -65.985 6.882 -1.067 -1.633 2.343 H21 0QJ 58 0QJ H22 H22 H 0 1 N N N 25.201 -65.941 8.981 -0.233 -3.188 0.600 H22 0QJ 59 0QJ H23 H23 H 0 1 N N N 24.937 -64.171 8.822 0.383 -1.806 -0.337 H23 0QJ 60 0QJ H25 H25 H 0 1 N N N 21.434 -66.264 7.938 0.758 -3.813 2.625 H25 0QJ 61 0QJ H26 H26 H 0 1 N N N 22.593 -65.786 6.652 2.140 -2.909 3.290 H26 0QJ 62 0QJ H27 H27 H 0 1 N N N 22.930 -67.222 7.677 0.505 -2.209 3.352 H27 0QJ 63 0QJ H28 H28 H 0 1 N N N 22.061 -66.436 10.031 3.296 -3.116 1.415 H28 0QJ 64 0QJ H29 H29 H 0 1 N N N 23.830 -66.426 10.338 2.108 -3.779 0.267 H29 0QJ 65 0QJ H30 H30 H 0 1 N N N 23.364 -63.740 10.466 2.208 -1.619 -1.016 H30 0QJ 66 0QJ H31 H31 H 0 1 N N N 23.798 -65.821 12.381 4.285 -3.658 -0.791 H31 0QJ 67 0QJ H32 H32 H 0 1 N N N 24.433 -63.874 13.551 4.361 -3.184 -3.131 H32 0QJ 68 0QJ H33 H33 H 0 1 N N N 21.584 -65.849 13.232 6.016 -2.161 -0.251 H33 0QJ 69 0QJ H34 H34 H 0 1 N N N 21.400 -64.192 14.886 6.392 -2.501 -2.618 H34 0QJ 70 0QJ H35 H35 H 0 1 N N N 21.364 -62.898 12.506 4.395 0.135 -1.490 H35 0QJ 71 0QJ H36 H36 H 0 1 N N N 14.653 -62.944 13.264 8.921 3.030 2.364 H36 0QJ 72 0QJ H37 H37 H 0 1 N N N 15.186 -64.221 12.397 9.784 3.947 1.252 H37 0QJ 73 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 0QJ CBB CAZ SING N N 1 0QJ CBC CAZ SING N N 2 0QJ CAZ CBA SING N N 3 0QJ CAZ CAY SING N N 4 0QJ CAY CAX DOUB Y N 5 0QJ CAY CBD SING Y N 6 0QJ CAX CAW SING Y N 7 0QJ CBD CBE DOUB Y N 8 0QJ CAW CAV DOUB Y N 9 0QJ CBE CAV SING Y N 10 0QJ CAV NAU SING N N 11 0QJ NAU CAT SING N N 12 0QJ CAT OBF DOUB N N 13 0QJ CAT NAS SING N N 14 0QJ NAS CAR SING N N 15 0QJ CAR CAQ SING N N 16 0QJ CAQ CAP SING N N 17 0QJ CAO NAN SING N N 18 0QJ CAP NAN SING N N 19 0QJ NAN CAM SING N N 20 0QJ CAM CAL SING N N 21 0QJ CAL OBG SING N N 22 0QJ CAL CAJ SING N N 23 0QJ OBG CAG SING N N 24 0QJ CAJ OAK SING N N 25 0QJ CAJ CAH SING N N 26 0QJ CAG N9 SING N N 27 0QJ CAG CAH SING N N 28 0QJ N9 C4 SING Y N 29 0QJ N9 C8 SING Y N 30 0QJ N3 C4 DOUB Y N 31 0QJ N3 C2 SING Y N 32 0QJ C4 C5 SING Y N 33 0QJ C8 N7 DOUB Y N 34 0QJ C2 N1 DOUB Y N 35 0QJ N7 C5 SING Y N 36 0QJ C5 C6 DOUB Y N 37 0QJ N1 C6 SING Y N 38 0QJ C6 N6 SING N N 39 0QJ CAH OAI SING N N 40 0QJ C2 H1 SING N N 41 0QJ C8 H2 SING N N 42 0QJ CBA H3 SING N N 43 0QJ CBA H4 SING N N 44 0QJ CBA H5 SING N N 45 0QJ CBB H6 SING N N 46 0QJ CBB H7 SING N N 47 0QJ CBB H8 SING N N 48 0QJ CBC H9 SING N N 49 0QJ CBC H10 SING N N 50 0QJ CBC H11 SING N N 51 0QJ CBD H12 SING N N 52 0QJ CBE H13 SING N N 53 0QJ CAX H14 SING N N 54 0QJ CAW H15 SING N N 55 0QJ NAU H16 SING N N 56 0QJ NAS H17 SING N N 57 0QJ CAR H18 SING N N 58 0QJ CAR H19 SING N N 59 0QJ CAQ H20 SING N N 60 0QJ CAQ H21 SING N N 61 0QJ CAP H22 SING N N 62 0QJ CAP H23 SING N N 63 0QJ CAO H25 SING N N 64 0QJ CAO H26 SING N N 65 0QJ CAO H27 SING N N 66 0QJ CAM H28 SING N N 67 0QJ CAM H29 SING N N 68 0QJ CAL H30 SING N N 69 0QJ CAJ H31 SING N N 70 0QJ OAK H32 SING N N 71 0QJ CAH H33 SING N N 72 0QJ OAI H34 SING N N 73 0QJ CAG H35 SING N N 74 0QJ N6 H36 SING N N 75 0QJ N6 H37 SING N N 76 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 0QJ SMILES ACDLabs 12.01 "O=C(Nc1ccc(cc1)C(C)(C)C)NCCCN(C)CC4OC(n3cnc2c(ncnc23)N)C(O)C4O" 0QJ InChI InChI 1.03 "InChI=1S/C25H36N8O4/c1-25(2,3)15-6-8-16(9-7-15)31-24(36)27-10-5-11-32(4)12-17-19(34)20(35)23(37-17)33-14-30-18-21(26)28-13-29-22(18)33/h6-9,13-14,17,19-20,23,34-35H,5,10-12H2,1-4H3,(H2,26,28,29)(H2,27,31,36)/t17-,19-,20-,23-/m1/s1" 0QJ InChIKey InChI 1.03 DHTNDMXCZIAPMX-ZDXOVATRSA-N 0QJ SMILES_CANONICAL CACTVS 3.370 "CN(CCCNC(=O)Nc1ccc(cc1)C(C)(C)C)C[C@H]2O[C@H]([C@H](O)[C@@H]2O)n3cnc4c(N)ncnc34" 0QJ SMILES CACTVS 3.370 "CN(CCCNC(=O)Nc1ccc(cc1)C(C)(C)C)C[CH]2O[CH]([CH](O)[CH]2O)n3cnc4c(N)ncnc34" 0QJ SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "CC(C)(C)c1ccc(cc1)NC(=O)NCCCN(C)C[C@@H]2[C@H]([C@H]([C@@H](O2)n3cnc4c3ncnc4N)O)O" 0QJ SMILES "OpenEye OEToolkits" 1.7.6 "CC(C)(C)c1ccc(cc1)NC(=O)NCCCN(C)CC2C(C(C(O2)n3cnc4c3ncnc4N)O)O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 0QJ "SYSTEMATIC NAME" ACDLabs 12.01 "5'-[(3-{[(4-tert-butylphenyl)carbamoyl]amino}propyl)(methyl)amino]-5'-deoxyadenosine" 0QJ "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "1-[3-[[(2R,3S,4R,5R)-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methyl-methyl-amino]propyl]-3-(4-tert-butylphenyl)urea" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 0QJ "Create component" 2012-04-12 RCSB 0QJ "Initial release" 2012-10-12 RCSB #