data_0T8 # _chem_comp.id 0T8 _chem_comp.name "4-(cyclopentylamino)-N-[3-(2-oxopyrrolidin-1-yl)propyl]-2-{[2-(pyridin-4-yl)ethyl]amino}pyrimidine-5-carboxamide" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C24 H33 N7 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2012-05-31 _chem_comp.pdbx_modified_date 2013-03-08 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 451.565 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 0T8 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 4FEQ _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 0T8 N1 N1 N 0 1 Y N N 32.715 16.358 15.168 -2.080 1.790 0.147 N1 0T8 1 0T8 N3 N3 N 0 1 Y N N 34.716 15.459 14.360 -1.621 -0.481 0.025 N3 0T8 2 0T8 C4 C4 C 0 1 N N N 32.941 12.730 16.206 1.601 1.331 0.053 C4 0T8 3 0T8 C5 C5 C 0 1 Y N N 33.875 16.507 14.485 -2.481 0.528 0.091 C5 0T8 4 0T8 C6 C6 C 0 1 N N N 30.240 16.181 16.293 -1.360 4.477 0.385 C6 0T8 5 0T8 C7 C7 C 0 1 N N N 28.834 15.653 16.042 -0.687 5.705 1.023 C7 0T8 6 0T8 C8 C8 C 0 1 N N N 30.186 16.937 17.607 -1.912 4.937 -0.980 C8 0T8 7 0T8 C10 C10 C 0 1 N N N 33.659 18.951 14.492 -4.300 -1.133 0.044 C10 0T8 8 0T8 C13 C13 C 0 1 N N N 33.572 10.467 18.371 4.704 -0.715 0.152 C13 0T8 9 0T8 C15 C15 C 0 1 N N N 33.243 9.007 18.713 6.205 -0.420 0.138 C15 0T8 10 0T8 C20 C20 C 0 1 N N N 33.889 7.374 20.453 7.338 -2.385 -0.878 C20 0T8 11 0T8 C21 C21 C 0 1 N N N 34.458 9.648 20.838 7.380 -2.329 1.443 C21 0T8 12 0T8 C22 C22 C 0 1 Y N N 30.620 22.714 14.393 -7.000 -4.507 -1.225 C22 0T8 13 0T8 C24 C24 C 0 1 N N N 34.462 7.314 21.854 8.076 -3.632 -0.446 C24 0T8 14 0T8 C26 C26 C 0 1 N N N 34.984 8.830 22.099 7.719 -3.785 1.051 C26 0T8 15 0T8 O25 O25 O 0 1 N N N 33.497 6.368 19.861 7.122 -2.068 -2.029 O25 0T8 16 0T8 N6 N6 N 0 1 N N N 33.856 8.621 19.993 6.951 -1.680 0.199 N6 0T8 17 0T8 C9 C9 C 0 1 N N N 34.048 10.539 16.929 3.925 0.600 0.089 C9 0T8 18 0T8 N4 N4 N 0 1 N N N 33.978 11.904 16.418 2.487 0.317 0.102 N4 0T8 19 0T8 O1 O1 O 0 1 N N N 31.788 12.429 16.486 1.994 2.481 -0.002 O1 0T8 20 0T8 C2 C2 C 0 1 Y N N 33.234 14.086 15.616 0.157 1.047 0.067 C2 0T8 21 0T8 C1 C1 C 0 1 Y N N 32.371 15.175 15.738 -0.788 2.094 0.137 C1 0T8 22 0T8 N2 N2 N 0 1 N N N 31.200 15.091 16.400 -0.376 3.408 0.194 N2 0T8 23 0T8 C12 C12 C 0 1 N N N 28.988 16.396 18.373 -2.088 6.467 -0.823 C12 0T8 24 0T8 C11 C11 C 0 1 N N N 28.064 15.749 17.351 -0.854 6.868 0.023 C11 0T8 25 0T8 C3 C3 C 0 1 Y N N 34.413 14.269 14.899 -0.318 -0.268 0.011 C3 0T8 26 0T8 N5 N5 N 0 1 N N N 34.200 17.701 13.947 -3.832 0.255 0.104 N5 0T8 27 0T8 C14 C14 C 0 1 N N N 32.540 19.509 13.614 -5.829 -1.157 0.072 C14 0T8 28 0T8 C16 C16 C 0 1 Y N N 31.612 20.504 14.304 -6.310 -2.584 0.010 C16 0T8 29 0T8 C19 C19 C 0 1 Y N N 30.852 20.152 15.418 -6.514 -3.315 1.171 C19 0T8 30 0T8 C23 C23 C 0 1 Y N N 30.005 21.102 15.990 -6.955 -4.621 1.075 C23 0T8 31 0T8 N7 N7 N 0 1 Y N N 29.910 22.339 15.470 -7.183 -5.172 -0.102 N7 0T8 32 0T8 C18 C18 C 0 1 Y N N 31.477 21.795 13.789 -6.560 -3.197 -1.208 C18 0T8 33 0T8 H6 H6 H 0 1 N N N 30.526 16.868 15.483 -2.174 4.126 1.018 H6 0T8 34 0T8 H7 H7 H 0 1 N N N 28.338 16.260 15.270 -1.175 5.950 1.966 H7 0T8 35 0T8 H7A H7A H 0 1 N N N 28.881 14.605 15.711 0.371 5.506 1.190 H7A 0T8 36 0T8 H8 H8 H 0 1 N N N 31.110 16.768 18.180 -1.199 4.714 -1.775 H8 0T8 37 0T8 H8A H8A H 0 1 N N N 30.062 18.014 17.420 -2.872 4.461 -1.183 H8A 0T8 38 0T8 H10 H10 H 0 1 N N N 33.260 18.759 15.499 -3.946 -1.596 -0.877 H10 0T8 39 0T8 H10A H10A H 0 0 N N N 34.468 19.693 14.554 -3.912 -1.684 0.900 H10A 0T8 40 0T8 H13 H13 H 0 1 N N N 32.672 11.087 18.494 4.447 -1.332 -0.710 H13 0T8 41 0T8 H13A H13A H 0 0 N N N 34.364 10.834 19.040 4.446 -1.247 1.068 H13A 0T8 42 0T8 H15 H15 H 0 1 N N N 32.152 8.891 18.786 6.463 0.111 -0.778 H15 0T8 43 0T8 H15A H15A H 0 0 N N N 33.629 8.354 17.916 6.462 0.196 1.000 H15A 0T8 44 0T8 H21 H21 H 0 1 N N N 33.711 10.397 21.139 6.569 -2.315 2.172 H21 0T8 45 0T8 H21A H21A H 0 0 N N N 35.289 10.147 20.318 8.261 -1.833 1.848 H21A 0T8 46 0T8 H22 H22 H 0 1 N N N 30.528 23.716 14.000 -7.193 -4.993 -2.171 H22 0T8 47 0T8 H24 H24 H 0 1 N N N 33.689 7.039 22.586 7.727 -4.497 -1.011 H24 0T8 48 0T8 H24A H24A H 0 0 N N N 35.293 6.596 21.911 9.151 -3.503 -0.571 H24A 0T8 49 0T8 H26 H26 H 0 1 N N N 36.082 8.859 22.149 8.575 -4.152 1.617 H26 0T8 50 0T8 H26A H26A H 0 0 N N N 34.564 9.239 23.030 6.855 -4.436 1.185 H26A 0T8 51 0T8 H9 H9 H 0 1 N N N 35.090 10.189 16.877 4.182 1.216 0.951 H9 0T8 52 0T8 H9A H9A H 0 1 N N N 33.412 9.890 16.308 4.182 1.131 -0.827 H9A 0T8 53 0T8 HN4 HN4 H 0 1 N N N 34.867 12.297 16.182 2.174 -0.600 0.146 HN4 0T8 54 0T8 HN2 HN2 H 0 1 N N N 31.420 14.991 17.370 0.566 3.626 0.107 HN2 0T8 55 0T8 H12 H12 H 0 1 N N N 29.317 15.650 19.111 -2.067 6.961 -1.795 H12 0T8 56 0T8 H12A H12A H 0 0 N N N 28.467 17.216 18.888 -3.012 6.698 -0.292 H12A 0T8 57 0T8 H11 H11 H 0 1 N N N 27.164 16.366 17.214 -1.042 7.802 0.553 H11 0T8 58 0T8 H11A H11A H 0 0 N N N 27.772 14.744 17.690 0.029 6.958 -0.609 H11A 0T8 59 0T8 H3 H3 H 0 1 N N N 35.094 13.440 14.775 0.372 -1.097 -0.043 H3 0T8 60 0T8 HN5 HN5 H 0 1 N N N 35.196 17.775 14.002 -4.474 0.981 0.152 HN5 0T8 61 0T8 H14 H14 H 0 1 N N N 33.002 20.014 12.753 -6.183 -0.694 0.993 H14 0T8 62 0T8 H14A H14A H 0 0 N N N 31.931 18.664 13.260 -6.217 -0.606 -0.784 H14A 0T8 63 0T8 H19 H19 H 0 1 N N N 30.918 19.157 15.833 -6.329 -2.870 2.137 H19 0T8 64 0T8 H23 H23 H 0 1 N N N 29.420 20.841 16.859 -7.116 -5.198 1.974 H23 0T8 65 0T8 H18 H18 H 0 1 N N N 32.042 22.084 12.915 -6.412 -2.657 -2.132 H18 0T8 66 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 0T8 N1 C5 DOUB Y N 1 0T8 N1 C1 SING Y N 2 0T8 N3 C5 SING Y N 3 0T8 N3 C3 DOUB Y N 4 0T8 C4 N4 SING N N 5 0T8 C4 O1 DOUB N N 6 0T8 C4 C2 SING N N 7 0T8 C5 N5 SING N N 8 0T8 C6 C7 SING N N 9 0T8 C6 C8 SING N N 10 0T8 C6 N2 SING N N 11 0T8 C7 C11 SING N N 12 0T8 C8 C12 SING N N 13 0T8 C10 N5 SING N N 14 0T8 C10 C14 SING N N 15 0T8 C13 C15 SING N N 16 0T8 C13 C9 SING N N 17 0T8 C15 N6 SING N N 18 0T8 C20 C24 SING N N 19 0T8 C20 O25 DOUB N N 20 0T8 C20 N6 SING N N 21 0T8 C21 C26 SING N N 22 0T8 C21 N6 SING N N 23 0T8 C22 N7 DOUB Y N 24 0T8 C22 C18 SING Y N 25 0T8 C24 C26 SING N N 26 0T8 C9 N4 SING N N 27 0T8 C2 C1 DOUB Y N 28 0T8 C2 C3 SING Y N 29 0T8 C1 N2 SING N N 30 0T8 C12 C11 SING N N 31 0T8 C14 C16 SING N N 32 0T8 C16 C19 SING Y N 33 0T8 C16 C18 DOUB Y N 34 0T8 C19 C23 DOUB Y N 35 0T8 C23 N7 SING Y N 36 0T8 C6 H6 SING N N 37 0T8 C7 H7 SING N N 38 0T8 C7 H7A SING N N 39 0T8 C8 H8 SING N N 40 0T8 C8 H8A SING N N 41 0T8 C10 H10 SING N N 42 0T8 C10 H10A SING N N 43 0T8 C13 H13 SING N N 44 0T8 C13 H13A SING N N 45 0T8 C15 H15 SING N N 46 0T8 C15 H15A SING N N 47 0T8 C21 H21 SING N N 48 0T8 C21 H21A SING N N 49 0T8 C22 H22 SING N N 50 0T8 C24 H24 SING N N 51 0T8 C24 H24A SING N N 52 0T8 C26 H26 SING N N 53 0T8 C26 H26A SING N N 54 0T8 C9 H9 SING N N 55 0T8 C9 H9A SING N N 56 0T8 N4 HN4 SING N N 57 0T8 N2 HN2 SING N N 58 0T8 C12 H12 SING N N 59 0T8 C12 H12A SING N N 60 0T8 C11 H11 SING N N 61 0T8 C11 H11A SING N N 62 0T8 C3 H3 SING N N 63 0T8 N5 HN5 SING N N 64 0T8 C14 H14 SING N N 65 0T8 C14 H14A SING N N 66 0T8 C19 H19 SING N N 67 0T8 C23 H23 SING N N 68 0T8 C18 H18 SING N N 69 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 0T8 SMILES ACDLabs 12.01 "O=C4N(CCCNC(=O)c2cnc(nc2NC1CCCC1)NCCc3ccncc3)CCC4" 0T8 InChI InChI 1.03 "InChI=1S/C24H33N7O2/c32-21-7-3-15-31(21)16-4-11-26-23(33)20-17-28-24(27-14-10-18-8-12-25-13-9-18)30-22(20)29-19-5-1-2-6-19/h8-9,12-13,17,19H,1-7,10-11,14-16H2,(H,26,33)(H2,27,28,29,30)" 0T8 InChIKey InChI 1.03 GAAYKHMHVHFOKV-UHFFFAOYSA-N 0T8 SMILES_CANONICAL CACTVS 3.370 "O=C1CCCN1CCCNC(=O)c2cnc(NCCc3ccncc3)nc2NC4CCCC4" 0T8 SMILES CACTVS 3.370 "O=C1CCCN1CCCNC(=O)c2cnc(NCCc3ccncc3)nc2NC4CCCC4" 0T8 SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "c1cnccc1CCNc2ncc(c(n2)NC3CCCC3)C(=O)NCCCN4CCCC4=O" 0T8 SMILES "OpenEye OEToolkits" 1.7.6 "c1cnccc1CCNc2ncc(c(n2)NC3CCCC3)C(=O)NCCCN4CCCC4=O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 0T8 "SYSTEMATIC NAME" ACDLabs 12.01 "4-(cyclopentylamino)-N-[3-(2-oxopyrrolidin-1-yl)propyl]-2-{[2-(pyridin-4-yl)ethyl]amino}pyrimidine-5-carboxamide" 0T8 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "4-(cyclopentylamino)-N-[3-(2-oxidanylidenepyrrolidin-1-yl)propyl]-2-(2-pyridin-4-ylethylamino)pyrimidine-5-carboxamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 0T8 "Create component" 2012-05-31 RCSB 0T8 "Modify formula" 2012-10-09 RCSB 0T8 "Initial release" 2013-03-13 RCSB #