data_0XU # _chem_comp.id 0XU _chem_comp.name "(2S,5S,6E)-2,5-diamino-6-[(3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-3,4-dihydroxydihydrofuran-2(3H)-ylidene]hexanoic acid" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C15 H21 N7 O5" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2012-09-04 _chem_comp.pdbx_modified_date 2012-10-12 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 379.371 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 0XU _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 4GQB _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 0XU N N N 0 1 N N N -27.850 -36.507 -6.910 6.371 -0.471 -1.912 N 0XU 1 0XU CA CA C 0 1 N N S -27.480 -37.807 -6.336 5.952 0.500 -0.892 CA 0XU 2 0XU C C C 0 1 N N N -26.346 -38.433 -7.126 7.165 1.021 -0.167 C 0XU 3 0XU O O O 0 1 N N N -26.504 -38.238 -8.472 8.200 0.398 -0.193 O 0XU 4 0XU OXT OXT O 0 1 N N N -25.402 -39.047 -6.631 7.096 2.179 0.509 OXT 0XU 5 0XU CB CB C 0 1 N N N -28.651 -38.767 -6.071 5.015 -0.183 0.106 CB 0XU 6 0XU CG CG C 0 1 N N N -29.560 -39.114 -7.252 3.728 -0.603 -0.607 CG 0XU 7 0XU CD CD C 0 1 N N S -30.923 -39.613 -6.739 2.791 -1.285 0.392 CD 0XU 8 0XU NE NE N 0 1 N N N -31.778 -40.273 -7.755 3.402 -2.537 0.860 NE 0XU 9 0XU "C5'" "C5'" C 0 1 N N N -31.658 -38.451 -6.140 1.476 -1.588 -0.279 "C5'" 0XU 10 0XU "C4'" "C4'" C 0 1 N N N -32.209 -38.312 -4.934 0.368 -1.026 0.160 "C4'" 0XU 11 0XU "O4'" "O4'" O 0 1 N N N -32.930 -37.169 -4.680 -0.890 -1.303 -0.282 "O4'" 0XU 12 0XU "C3'" "C3'" C 0 1 N N S -32.153 -39.229 -3.753 0.283 0.032 1.243 "C3'" 0XU 13 0XU "O3'" "O3'" O 0 1 N N N -31.119 -38.766 -2.900 1.061 1.177 0.888 "O3'" 0XU 14 0XU "C2'" "C2'" C 0 1 N N R -33.504 -38.917 -3.123 -1.223 0.394 1.298 "C2'" 0XU 15 0XU "O2'" "O2'" O 0 1 N N N -33.515 -38.951 -1.703 -1.409 1.806 1.415 "O2'" 0XU 16 0XU "C1'" "C1'" C 0 1 N N R -33.743 -37.477 -3.549 -1.702 -0.126 -0.086 "C1'" 0XU 17 0XU N9 N9 N 0 1 Y N N -35.133 -37.153 -3.821 -3.124 -0.477 -0.043 N9 0XU 18 0XU C8 C8 C 0 1 Y N N -36.102 -37.908 -4.434 -3.645 -1.693 0.286 C8 0XU 19 0XU N7 N7 N 0 1 Y N N -37.301 -37.318 -4.383 -4.944 -1.652 0.221 N7 0XU 20 0XU C5 C5 C 0 1 Y N N -37.081 -36.129 -3.691 -5.338 -0.411 -0.153 C5 0XU 21 0XU C6 C6 C 0 1 Y N N -37.880 -35.041 -3.354 -6.581 0.205 -0.380 C6 0XU 22 0XU N6 N6 N 0 1 N N N -39.272 -34.970 -3.666 -7.760 -0.502 -0.224 N6 0XU 23 0XU N1 N1 N 0 1 Y N N -37.314 -34.027 -2.662 -6.596 1.482 -0.748 N1 0XU 24 0XU C2 C2 C 0 1 Y N N -35.989 -34.055 -2.370 -5.476 2.164 -0.899 C2 0XU 25 0XU N3 N3 N 0 1 Y N N -35.110 -35.036 -2.660 -4.290 1.629 -0.697 N3 0XU 26 0XU C4 C4 C 0 1 Y N N -35.730 -36.027 -3.337 -4.175 0.359 -0.321 C4 0XU 27 0XU H1 H1 H 0 1 N N N -28.597 -36.108 -6.379 6.857 -1.249 -1.493 H1 0XU 28 0XU H2 H2 H 0 1 N N N -27.060 -35.895 -6.885 5.582 -0.788 -2.456 H2 0XU 29 0XU H4 H4 H 0 1 N N N -27.058 -37.588 -5.344 5.431 1.328 -1.372 H4 0XU 30 0XU H5 H5 H 0 1 N N N -24.824 -39.350 -7.321 7.901 2.473 0.959 H5 0XU 31 0XU H6 H6 H 0 1 N N N -29.281 -38.312 -5.293 5.505 -1.064 0.520 H6 0XU 32 0XU H7 H7 H 0 1 N N N -28.226 -39.709 -5.694 4.775 0.511 0.912 H7 0XU 33 0XU H8 H8 H 0 1 N N N -29.087 -39.902 -7.856 3.238 0.279 -1.020 H8 0XU 34 0XU H9 H9 H 0 1 N N N -29.710 -38.218 -7.872 3.968 -1.296 -1.412 H9 0XU 35 0XU H10 H10 H 0 1 N N N -30.726 -40.338 -5.936 2.622 -0.624 1.242 H10 0XU 36 0XU H11 H11 H 0 1 N N N -32.637 -40.562 -7.332 3.653 -3.129 0.083 H11 0XU 37 0XU H12 H12 H 0 1 N N N -31.971 -39.630 -8.496 4.201 -2.352 1.447 H12 0XU 38 0XU H14 H14 H 0 1 N N N -31.756 -37.592 -6.787 1.442 -2.266 -1.119 H14 0XU 39 0XU H15 H15 H 0 1 N N N -32.059 -40.287 -4.039 0.613 -0.374 2.200 H15 0XU 40 0XU H16 H16 H 0 1 N N N -31.059 -39.331 -2.138 2.012 1.008 0.845 H16 0XU 41 0XU H17 H17 H 0 1 N N N -34.279 -39.571 -3.549 -1.725 -0.135 2.109 H17 0XU 42 0XU H18 H18 H 0 1 N N N -34.388 -38.747 -1.388 -1.029 2.188 2.217 H18 0XU 43 0XU H19 H19 H 0 1 N N N -33.413 -36.842 -2.714 -1.508 0.611 -0.865 H19 0XU 44 0XU H20 H20 H 0 1 N N N -35.918 -38.864 -4.901 -3.065 -2.562 0.560 H20 0XU 45 0XU H21 H21 H 0 1 N N N -39.653 -34.120 -3.301 -7.735 -1.433 0.045 H21 0XU 46 0XU H22 H22 H 0 1 N N N -39.392 -34.990 -4.659 -8.612 -0.066 -0.384 H22 0XU 47 0XU H23 H23 H 0 1 N N N -35.595 -33.196 -1.847 -5.535 3.200 -1.200 H23 0XU 48 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 0XU O C DOUB N N 1 0XU NE CD SING N N 2 0XU CG CD SING N N 3 0XU CG CB SING N N 4 0XU C OXT SING N N 5 0XU C CA SING N N 6 0XU N CA SING N N 7 0XU CD "C5'" SING N N 8 0XU CA CB SING N N 9 0XU "C5'" "C4'" DOUB N E 10 0XU "C4'" "O4'" SING N N 11 0XU "C4'" "C3'" SING N N 12 0XU "O4'" "C1'" SING N N 13 0XU C8 N7 DOUB Y N 14 0XU C8 N9 SING Y N 15 0XU N7 C5 SING Y N 16 0XU N9 "C1'" SING N N 17 0XU N9 C4 SING Y N 18 0XU "C3'" "C2'" SING N N 19 0XU "C3'" "O3'" SING N N 20 0XU C5 C6 DOUB Y N 21 0XU C5 C4 SING Y N 22 0XU N6 C6 SING N N 23 0XU "C1'" "C2'" SING N N 24 0XU C6 N1 SING Y N 25 0XU C4 N3 DOUB Y N 26 0XU "C2'" "O2'" SING N N 27 0XU N1 C2 DOUB Y N 28 0XU N3 C2 SING Y N 29 0XU N H1 SING N N 30 0XU N H2 SING N N 31 0XU CA H4 SING N N 32 0XU OXT H5 SING N N 33 0XU CB H6 SING N N 34 0XU CB H7 SING N N 35 0XU CG H8 SING N N 36 0XU CG H9 SING N N 37 0XU CD H10 SING N N 38 0XU NE H11 SING N N 39 0XU NE H12 SING N N 40 0XU "C5'" H14 SING N N 41 0XU "C3'" H15 SING N N 42 0XU "O3'" H16 SING N N 43 0XU "C2'" H17 SING N N 44 0XU "O2'" H18 SING N N 45 0XU "C1'" H19 SING N N 46 0XU C8 H20 SING N N 47 0XU N6 H21 SING N N 48 0XU N6 H22 SING N N 49 0XU C2 H23 SING N N 50 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 0XU SMILES ACDLabs 12.01 "O=C(O)C(N)CCC(N)\C=C3\OC(n2cnc1c(ncnc12)N)C(O)C3O" 0XU InChI InChI 1.03 "InChI=1S/C15H21N7O5/c16-6(1-2-7(17)15(25)26)3-8-10(23)11(24)14(27-8)22-5-21-9-12(18)19-4-20-13(9)22/h3-7,10-11,14,23-24H,1-2,16-17H2,(H,25,26)(H2,18,19,20)/b8-3+/t6-,7-,10+,11+,14+/m0/s1" 0XU InChIKey InChI 1.03 YNKCTZQHSHSLNN-XVIGKWCNSA-N 0XU SMILES_CANONICAL CACTVS 3.370 "N[C@@H](CC[C@H](N)C(O)=O)\C=C1\O[C@H]([C@H](O)[C@@H]1O)n2cnc3c(N)ncnc23" 0XU SMILES CACTVS 3.370 "N[CH](CC[CH](N)C(O)=O)C=C1O[CH]([CH](O)[CH]1O)n2cnc3c(N)ncnc23" 0XU SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "c1nc(c2c(n1)n(cn2)[C@H]3[C@@H]([C@@H](/C(=C\[C@H](CC[C@@H](C(=O)O)N)N)/O3)O)O)N" 0XU SMILES "OpenEye OEToolkits" 1.7.6 "c1nc(c2c(n1)n(cn2)C3C(C(C(=CC(CCC(C(=O)O)N)N)O3)O)O)N" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 0XU "SYSTEMATIC NAME" ACDLabs 12.01 "(2S,5S,6E)-2,5-diamino-6-[(3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-3,4-dihydroxydihydrofuran-2(3H)-ylidene]hexanoic acid" 0XU "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "(2S,5S,6E)-6-[(3S,4R,5R)-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-ylidene]-2,5-bis(azanyl)hexanoic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 0XU "Create component" 2012-09-04 RCSB 0XU "Initial release" 2012-10-12 RCSB #