data_0YN
#
_chem_comp.id 0YN
_chem_comp.name "2-{4-[(4-amino-2-methylpyrimidin-5-yl)methyl]-3-methylthiophen-2-yl}ethanol"
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C13 H17 N3 O S"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2012-10-08
_chem_comp.pdbx_modified_date 2013-09-27
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 263.359
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code 0YN
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 4HCY
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
0YN C2A C2A C 0 1 N N N 62.112 17.285 29.565 5.093 1.482 1.409 C2A 0YN 1
0YN C35 C35 C 0 1 N N N 63.097 19.722 24.470 0.741 -0.553 -1.646 C35 0YN 2
0YN C2 C2 C 0 1 Y N N 60.658 19.125 23.960 -0.729 -1.947 -0.195 C2 0YN 3
0YN S1 S1 S 0 1 Y N N 59.394 19.582 22.863 -2.182 -1.811 0.786 S1 0YN 4
0YN C5 C5 C 0 1 Y N N 60.321 20.765 22.023 -2.336 -0.107 0.375 C5 0YN 5
0YN C4 C4 C 0 1 Y N N 61.685 20.799 22.625 -1.338 0.249 -0.435 C4 0YN 6
0YN C4A C4A C 0 1 N N N 62.796 21.709 22.170 -1.187 1.650 -0.968 C4A 0YN 7
0YN C5A C5A C 0 1 N N N 59.617 21.486 20.898 -3.430 0.808 0.860 C5A 0YN 8
0YN C5B C5B C 0 1 N N N 60.352 21.258 19.585 -4.604 0.763 -0.121 C5B 0YN 9
0YN O5G O5G O 0 1 N N N 59.563 21.765 18.506 -5.642 1.632 0.339 O5G 0YN 10
0YN "N1'" "N1'" N 0 1 Y N N 62.552 17.148 27.138 3.155 1.779 -0.038 "N1'" 0YN 11
0YN "C2'" "C2'" C 0 1 Y N N 62.371 17.925 28.228 3.943 0.938 0.602 "C2'" 0YN 12
0YN "N3'" "N3'" N 0 1 Y N N 62.420 19.271 28.127 3.752 -0.365 0.555 "N3'" 0YN 13
0YN "C4'" "C4'" C 0 1 Y N N 62.650 19.860 26.936 2.747 -0.879 -0.147 "C4'" 0YN 14
0YN "N4'" "N4'" N 0 1 N N N 62.697 21.210 26.841 2.550 -2.250 -0.193 "N4'" 0YN 15
0YN "C5'" "C5'" C 0 1 Y N N 62.835 19.077 25.813 1.894 -0.016 -0.837 "C5'" 0YN 16
0YN "C6'" "C6'" C 0 1 Y N N 62.784 17.695 25.940 2.132 1.342 -0.759 "C6'" 0YN 17
0YN C3 C3 C 0 1 Y N N 61.811 19.880 23.691 -0.448 -0.765 -0.746 C3 0YN 18
0YN H1 H1 H 0 1 N N N 62.107 16.191 29.453 4.763 1.673 2.430 H1 0YN 19
0YN H2 H2 H 0 1 N N N 62.903 17.578 30.271 5.905 0.755 1.420 H2 0YN 20
0YN H3 H3 H 0 1 N N N 61.137 17.619 29.948 5.444 2.412 0.961 H3 0YN 21
0YN H4 H4 H 0 1 N N N 63.791 19.091 23.896 0.482 0.162 -2.428 H4 0YN 22
0YN H5 H5 H 0 1 N N N 63.547 20.713 24.628 1.027 -1.501 -2.101 H5 0YN 23
0YN H6 H6 H 0 1 N N N 60.571 18.375 24.732 -0.150 -2.849 -0.327 H6 0YN 24
0YN H7 H7 H 0 1 N N N 62.747 22.655 22.729 -0.577 2.237 -0.281 H7 0YN 25
0YN H8 H8 H 0 1 N N N 63.766 21.224 22.354 -0.705 1.618 -1.945 H8 0YN 26
0YN H9 H9 H 0 1 N N N 62.686 21.912 21.094 -2.171 2.110 -1.064 H9 0YN 27
0YN H10 H10 H 0 1 N N N 59.591 22.564 21.117 -3.767 0.483 1.844 H10 0YN 28
0YN H11 H11 H 0 1 N N N 58.589 21.105 20.810 -3.049 1.827 0.924 H11 0YN 29
0YN H12 H12 H 0 1 N N N 60.521 20.181 19.441 -4.267 1.089 -1.105 H12 0YN 30
0YN H13 H13 H 0 1 N N N 61.319 21.781 19.610 -4.985 -0.256 -0.185 H13 0YN 31
0YN H14 H14 H 0 1 N N N 60.020 21.624 17.685 -6.419 1.653 -0.236 H14 0YN 32
0YN H15 H15 H 0 1 N N N 62.542 21.614 27.743 3.147 -2.842 0.289 H15 0YN 33
0YN H16 H16 H 0 1 N N N 63.595 21.489 26.501 1.814 -2.617 -0.708 H16 0YN 34
0YN H17 H17 H 0 1 N N N 62.931 17.065 25.075 1.493 2.040 -1.280 H17 0YN 35
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
0YN O5G C5B SING N N 1
0YN C5B C5A SING N N 2
0YN C5A C5 SING N N 3
0YN C5 C4 DOUB Y N 4
0YN C5 S1 SING Y N 5
0YN C4A C4 SING N N 6
0YN C4 C3 SING Y N 7
0YN S1 C2 SING Y N 8
0YN C3 C2 DOUB Y N 9
0YN C3 C35 SING N N 10
0YN C35 "C5'" SING N N 11
0YN "C5'" "C6'" DOUB Y N 12
0YN "C5'" "C4'" SING Y N 13
0YN "C6'" "N1'" SING Y N 14
0YN "N4'" "C4'" SING N N 15
0YN "C4'" "N3'" DOUB Y N 16
0YN "N1'" "C2'" DOUB Y N 17
0YN "N3'" "C2'" SING Y N 18
0YN "C2'" C2A SING N N 19
0YN C2A H1 SING N N 20
0YN C2A H2 SING N N 21
0YN C2A H3 SING N N 22
0YN C35 H4 SING N N 23
0YN C35 H5 SING N N 24
0YN C2 H6 SING N N 25
0YN C4A H7 SING N N 26
0YN C4A H8 SING N N 27
0YN C4A H9 SING N N 28
0YN C5A H10 SING N N 29
0YN C5A H11 SING N N 30
0YN C5B H12 SING N N 31
0YN C5B H13 SING N N 32
0YN O5G H14 SING N N 33
0YN "N4'" H15 SING N N 34
0YN "N4'" H16 SING N N 35
0YN "C6'" H17 SING N N 36
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
0YN SMILES ACDLabs 12.01 "n1c(c(cnc1C)Cc2c(c(sc2)CCO)C)N"
0YN InChI InChI 1.03 "InChI=1S/C13H17N3OS/c1-8-11(7-18-12(8)3-4-17)5-10-6-15-9(2)16-13(10)14/h6-7,17H,3-5H2,1-2H3,(H2,14,15,16)"
0YN InChIKey InChI 1.03 HLBXMICRXICHJQ-UHFFFAOYSA-N
0YN SMILES_CANONICAL CACTVS 3.370 "Cc1ncc(Cc2csc(CCO)c2C)c(N)n1"
0YN SMILES CACTVS 3.370 "Cc1ncc(Cc2csc(CCO)c2C)c(N)n1"
0YN SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "Cc1c(csc1CCO)Cc2cnc(nc2N)C"
0YN SMILES "OpenEye OEToolkits" 1.7.6 "Cc1c(csc1CCO)Cc2cnc(nc2N)C"
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
0YN "SYSTEMATIC NAME" ACDLabs 12.01 "2-{4-[(4-amino-2-methylpyrimidin-5-yl)methyl]-3-methylthiophen-2-yl}ethanol"
0YN "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "2-[4-[(4-azanyl-2-methyl-pyrimidin-5-yl)methyl]-3-methyl-thiophen-2-yl]ethanol"
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
0YN "Create component" 2012-10-08 RCSB
0YN "Initial release" 2013-10-02 RCSB
#