data_11F # _chem_comp.id 11F _chem_comp.name "5-[(3S)-3-(2-methoxybiphenyl-4-yl)but-1-yn-1-yl]-6-methylpyrimidine-2,4-diamine" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C22 H22 N4 O" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "2,4-Diamino-5-[3S-(3-methoxy-4-phenylphenyl)but-1-ynyl]-6-methylpyrimidine" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2009-01-13 _chem_comp.pdbx_modified_date 2020-06-17 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 358.436 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 11F _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 3FQV _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 11F C1K C1K C 0 1 Y N N -32.598 -12.819 48.325 -5.020 0.951 1.447 C1K 11F 1 11F C1I C1I C 0 1 Y N N -33.347 -12.867 49.501 -6.168 1.717 1.412 C1I 11F 2 11F C1H C1H C 0 1 Y N N -34.092 -14.006 49.811 -6.573 2.305 0.228 C1H 11F 3 11F C1J C1J C 0 1 Y N N -34.084 -15.102 48.949 -5.832 2.131 -0.927 C1J 11F 4 11F C1L C1L C 0 1 Y N N -33.335 -15.051 47.773 -4.682 1.367 -0.903 C1L 11F 5 11F C1V C1V C 0 1 Y N N -32.588 -13.911 47.457 -4.266 0.777 0.289 C1V 11F 6 11F C1Z C1Z C 0 1 Y N N -31.853 -13.893 46.271 -3.031 -0.045 0.320 C1Z 11F 7 11F C1Y C1Y C 0 1 Y N N -32.151 -12.990 45.238 -2.832 -1.050 -0.630 C1Y 11F 8 11F C1O C1O C 0 1 Y N N -31.390 -13.010 44.060 -1.675 -1.812 -0.593 C1O 11F 9 11F O1R O1R O 0 1 N N N -33.162 -12.081 45.394 -3.768 -1.279 -1.587 O1R 11F 10 11F C1A C1A C 0 1 N N N -33.650 -11.490 44.168 -3.496 -2.322 -2.525 C1A 11F 11 11F C1N C1N C 0 1 Y N N -30.815 -14.812 46.109 -2.062 0.186 1.295 C1N 11F 12 11F C1M C1M C 0 1 Y N N -30.075 -14.824 44.930 -0.915 -0.581 1.320 C1M 11F 13 11F C1W C1W C 0 1 Y N N -30.347 -13.920 43.903 -0.723 -1.579 0.381 C1W 11F 14 11F C2A C2A C 0 1 N N R -29.534 -13.952 42.590 0.533 -2.411 0.417 C2A 11F 15 11F C1C C1C C 0 1 N N N -28.323 -14.853 42.727 0.619 -3.146 1.757 C1C 11F 16 11F C1G C1G C 0 1 N N N -29.048 -12.640 42.162 1.706 -1.536 0.261 C1G 11F 17 11F C1F C1F C 0 1 N N N -28.609 -11.582 41.770 2.642 -0.839 0.137 C1F 11F 18 11F C5 C5 C 0 1 Y N N -28.079 -10.342 41.295 3.784 0.012 -0.015 C5 11F 19 11F C6 C6 C 0 1 Y N N -28.546 -9.134 41.802 5.076 -0.515 -0.015 C6 11F 20 11F C1B C1B C 0 1 N N N -29.627 -9.100 42.878 5.295 -1.997 0.144 C1B 11F 21 11F N1 N1 N 0 1 Y N N -28.031 -7.984 41.342 6.105 0.304 -0.158 N1 11F 22 11F C2 C2 C 0 1 Y N N -27.079 -7.980 40.394 5.926 1.610 -0.300 C2 11F 23 11F N1D N1D N 0 1 N N N -26.595 -6.822 39.952 7.032 2.426 -0.446 N1D 11F 24 11F N3 N3 N 0 1 Y N N -26.619 -9.134 39.883 4.719 2.156 -0.306 N3 11F 25 11F C4 C4 C 0 1 Y N N -27.091 -10.316 40.310 3.632 1.404 -0.174 C4 11F 26 11F N1E N1E N 0 1 N N N -26.607 -11.442 39.789 2.375 1.979 -0.181 N1E 11F 27 11F H1K H1K H 0 1 N N N -32.025 -11.935 48.086 -4.704 0.492 2.372 H1K 11F 28 11F H1I H1I H 0 1 N N N -33.350 -12.021 50.173 -6.750 1.856 2.310 H1I 11F 29 11F H1H H1H H 0 1 N N N -34.675 -14.038 50.719 -7.472 2.904 0.204 H1H 11F 30 11F H1J H1J H 0 1 N N N -34.655 -15.986 49.191 -6.153 2.592 -1.849 H1J 11F 31 11F H1L H1L H 0 1 N N N -33.332 -15.897 47.102 -4.104 1.231 -1.806 H1L 11F 32 11F H1O H1O H 0 1 N N N -31.615 -12.313 43.267 -1.517 -2.590 -1.326 H1O 11F 33 11F H1A H1A H 0 1 N N N -33.774 -10.406 44.307 -2.577 -2.095 -3.064 H1A 11F 34 11F H1AA H1AA H 0 0 N N N -32.928 -11.676 43.359 -3.383 -3.267 -1.994 H1AA 11F 35 11F H1AB H1AB H 0 0 N N N -34.619 -11.939 43.905 -4.322 -2.400 -3.232 H1AB 11F 36 11F H1N H1N H 0 1 N N N -30.586 -15.513 46.898 -2.209 0.964 2.029 H1N 11F 37 11F H1M H1M H 0 1 N N N -29.279 -15.544 44.809 -0.164 -0.401 2.076 H1M 11F 38 11F H2A H2A H 0 1 N N N -30.239 -14.329 41.835 0.511 -3.138 -0.395 H2A 11F 39 11F H1C H1C H 0 1 N N N -27.913 -15.071 41.730 1.527 -3.748 1.783 H1C 11F 40 11F H1CA H1CA H 0 0 N N N -27.558 -14.349 43.335 0.641 -2.420 2.569 H1CA 11F 41 11F H1CB H1CB H 0 0 N N N -28.619 -15.793 43.215 -0.250 -3.794 1.872 H1CB 11F 42 11F H1B H1B H 0 1 N N N -29.156 -9.092 43.872 5.300 -2.471 -0.837 H1B 11F 43 11F H1BA H1BA H 0 0 N N N -30.238 -8.194 42.755 6.252 -2.172 0.637 H1BA 11F 44 11F H1BB H1BB H 0 0 N N N -30.267 -9.990 42.783 4.493 -2.421 0.748 H1BB 11F 45 11F HN1D HN1D H 0 0 N N N -26.474 -6.195 40.722 7.923 2.041 -0.444 HN1D 11F 46 11F HN1A HN1A H 0 0 N N N -25.713 -6.978 39.507 6.918 3.384 -0.551 HN1A 11F 47 11F HN1E HN1E H 0 0 N N N -26.486 -11.328 38.803 2.280 2.939 -0.282 HN1E 11F 48 11F HN1B HN1B H 0 0 N N N -25.725 -11.652 40.211 1.586 1.422 -0.084 HN1B 11F 49 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 11F C1V C1K DOUB Y N 1 11F C1K C1I SING Y N 2 11F C1K H1K SING N N 3 11F C1I C1H DOUB Y N 4 11F C1I H1I SING N N 5 11F C1J C1H SING Y N 6 11F C1H H1H SING N N 7 11F C1L C1J DOUB Y N 8 11F C1J H1J SING N N 9 11F C1V C1L SING Y N 10 11F C1L H1L SING N N 11 11F C1Z C1V SING Y N 12 11F C1Y C1Z DOUB Y N 13 11F C1N C1Z SING Y N 14 11F C1O C1Y SING Y N 15 11F C1Y O1R SING N N 16 11F C1W C1O DOUB Y N 17 11F C1O H1O SING N N 18 11F C1A O1R SING N N 19 11F C1A H1A SING N N 20 11F C1A H1AA SING N N 21 11F C1A H1AB SING N N 22 11F C1M C1N DOUB Y N 23 11F C1N H1N SING N N 24 11F C1W C1M SING Y N 25 11F C1M H1M SING N N 26 11F C2A C1W SING N N 27 11F C1G C2A SING N N 28 11F C2A C1C SING N N 29 11F C2A H2A SING N N 30 11F C1C H1C SING N N 31 11F C1C H1CA SING N N 32 11F C1C H1CB SING N N 33 11F C1F C1G TRIP N N 34 11F C5 C1F SING N N 35 11F C4 C5 DOUB Y N 36 11F C5 C6 SING Y N 37 11F N1 C6 DOUB Y N 38 11F C6 C1B SING N N 39 11F C1B H1B SING N N 40 11F C1B H1BA SING N N 41 11F C1B H1BB SING N N 42 11F C2 N1 SING Y N 43 11F N3 C2 DOUB Y N 44 11F N1D C2 SING N N 45 11F N1D HN1D SING N N 46 11F N1D HN1A SING N N 47 11F N3 C4 SING Y N 48 11F N1E C4 SING N N 49 11F N1E HN1E SING N N 50 11F N1E HN1B SING N N 51 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 11F SMILES ACDLabs 10.04 "C(#CC(c2ccc(c1ccccc1)c(OC)c2)C)c3c(nc(nc3C)N)N" 11F SMILES_CANONICAL CACTVS 3.341 "COc1cc(ccc1c2ccccc2)[C@H](C)C#Cc3c(C)nc(N)nc3N" 11F SMILES CACTVS 3.341 "COc1cc(ccc1c2ccccc2)[CH](C)C#Cc3c(C)nc(N)nc3N" 11F SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "Cc1c(c(nc(n1)N)N)C#C[C@@H](C)c2ccc(c(c2)OC)c3ccccc3" 11F SMILES "OpenEye OEToolkits" 1.5.0 "Cc1c(c(nc(n1)N)N)C#CC(C)c2ccc(c(c2)OC)c3ccccc3" 11F InChI InChI 1.03 "InChI=1S/C22H22N4O/c1-14(9-11-18-15(2)25-22(24)26-21(18)23)17-10-12-19(20(13-17)27-3)16-7-5-4-6-8-16/h4-8,10,12-14H,1-3H3,(H4,23,24,25,26)/t14-/m1/s1" 11F InChIKey InChI 1.03 YYCPXVRHQUEVAW-CQSZACIVSA-N # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 11F "SYSTEMATIC NAME" ACDLabs 10.04 "5-[(3S)-3-(2-methoxybiphenyl-4-yl)but-1-yn-1-yl]-6-methylpyrimidine-2,4-diamine" 11F "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "5-[(3S)-3-(3-methoxy-4-phenyl-phenyl)but-1-ynyl]-6-methyl-pyrimidine-2,4-diamine" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 11F "Create component" 2009-01-13 RCSB 11F "Modify aromatic_flag" 2011-06-04 RCSB 11F "Modify descriptor" 2011-06-04 RCSB 11F "Modify synonyms" 2020-06-05 PDBE # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id 11F _pdbx_chem_comp_synonyms.name "2,4-Diamino-5-[3S-(3-methoxy-4-phenylphenyl)but-1-ynyl]-6-methylpyrimidine" _pdbx_chem_comp_synonyms.provenance ? _pdbx_chem_comp_synonyms.type ? ##