data_13P # _chem_comp.id 13P _chem_comp.name 1,3-DIHYDROXYACETONEPHOSPHATE _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C3 H7 O6 P" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 1999-07-08 _chem_comp.pdbx_modified_date 2024-09-27 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 170.058 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 13P _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details ? _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 1ADO _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm Y # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 13P P P P 0 1 N N N N N N 58.312 -6.451 23.575 0.028 -0.040 -1.864 P 13P 1 13P O1P O1P O 0 1 N N N N N N 59.798 -5.947 23.281 0.751 -1.323 -2.013 O1P 13P 2 13P O2P O2P O 0 1 N N N N N N 57.597 -6.592 22.173 -1.125 0.057 -2.983 O2P 13P 3 13P O3P O3P O 0 1 N N N N N N 57.576 -5.370 24.420 1.060 1.181 -2.048 O3P 13P 4 13P O1 O1 O 0 1 N N N N N N 58.395 -7.842 24.375 -0.636 0.033 -0.400 O1 13P 5 13P C1 C1 C 0 1 N N N N N N 57.341 -8.180 25.274 0.431 -0.058 0.543 C1 13P 6 13P C2 C2 C 0 1 N N N N N N 56.553 -9.274 24.600 -0.126 0.005 1.942 C2 13P 7 13P O2 O2 O 0 1 N Y N N N N 56.651 -10.435 24.996 -1.316 0.118 2.112 O2 13P 8 13P C3 C3 C 0 1 N N N N N N 55.629 -8.939 23.444 0.800 -0.071 3.127 C3 13P 9 13P O3 O3 O 0 1 N N N N N N 55.054 -10.137 22.954 0.038 0.010 4.334 O3 13P 10 13P HOP2 2HOP H 0 0 N N N N N N 57.372 -5.657 21.892 -0.685 0.009 -3.843 HOP2 13P 11 13P HOP3 3HOP H 0 0 N N N N N N 56.691 -5.669 24.595 0.549 1.996 -1.944 HOP3 13P 12 13P H11 1H1 H 0 1 N N N N N N 57.697 -8.453 26.294 1.124 0.769 0.390 H11 13P 13 13P H12 2H1 H 0 1 N N N N N N 56.718 -7.306 25.577 0.958 -1.002 0.405 H12 13P 14 13P H31 1H3 H 0 1 N N N N N N 54.860 -8.180 23.720 1.509 0.756 3.089 H31 13P 15 13P H32 2H3 H 0 1 N N N N N N 56.142 -8.355 22.644 1.343 -1.016 3.104 H32 13P 16 13P HO3 HO3 H 0 1 N N N N N N 54.180 -10.288 23.333 0.667 -0.042 5.066 HO3 13P 17 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 13P P O1P DOUB N N 1 13P P O2P SING N N 2 13P P O3P SING N N 3 13P P O1 SING N N 4 13P O2P HOP2 SING N N 5 13P O3P HOP3 SING N N 6 13P O1 C1 SING N N 7 13P C1 C2 SING N N 8 13P C1 H11 SING N N 9 13P C1 H12 SING N N 10 13P C2 O2 DOUB N N 11 13P C2 C3 SING N N 12 13P C3 O3 SING N N 13 13P C3 H31 SING N N 14 13P C3 H32 SING N N 15 13P O3 HO3 SING N N 16 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 13P SMILES ACDLabs 10.04 "O=P(O)(O)OCC(=O)CO" 13P SMILES_CANONICAL CACTVS 3.341 "OCC(=O)CO[P](O)(O)=O" 13P SMILES CACTVS 3.341 "OCC(=O)CO[P](O)(O)=O" 13P SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "C(C(=O)COP(=O)(O)O)O" 13P SMILES "OpenEye OEToolkits" 1.5.0 "C(C(=O)COP(=O)(O)O)O" 13P InChI InChI 1.03 "InChI=1S/C3H7O6P/c4-1-3(5)2-9-10(6,7)8/h4H,1-2H2,(H2,6,7,8)" 13P InChIKey InChI 1.03 GNGACRATGGDKBX-UHFFFAOYSA-N # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 13P "SYSTEMATIC NAME" ACDLabs 10.04 "3-hydroxy-2-oxopropyl dihydrogen phosphate" 13P "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "(3-hydroxy-2-oxo-propyl) dihydrogen phosphate" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 13P "Create component" 1999-07-08 RCSB 13P "Modify descriptor" 2011-06-04 RCSB 13P "Modify PCM" 2024-09-27 PDBE # _pdbx_chem_comp_pcm.pcm_id 1 _pdbx_chem_comp_pcm.comp_id 13P _pdbx_chem_comp_pcm.modified_residue_id LYS _pdbx_chem_comp_pcm.type None _pdbx_chem_comp_pcm.category "Covalent chemical modification" _pdbx_chem_comp_pcm.position "Amino-acid side chain" _pdbx_chem_comp_pcm.polypeptide_position "Any position" _pdbx_chem_comp_pcm.comp_id_linking_atom C2 _pdbx_chem_comp_pcm.modified_residue_id_linking_atom NZ _pdbx_chem_comp_pcm.uniprot_specific_ptm_accession ? _pdbx_chem_comp_pcm.uniprot_generic_ptm_accession ? #