data_15L # _chem_comp.id 15L _chem_comp.name "D-galactaro-1,5-lactone" _chem_comp.type D-saccharide _chem_comp.pdbx_type ATOMS _chem_comp.formula "C6 H8 O7" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "galactaro-1,5-lactone; (2S,3R,4S,5R,6S)-3,4,5-trihydroxy-6-oxidotetrahydro-2H-pyran-2-carboxylate" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2011-04-11 _chem_comp.pdbx_modified_date 2020-07-17 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 192.124 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 15L _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 3RFV _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _pdbx_chem_comp_synonyms.ordinal _pdbx_chem_comp_synonyms.comp_id _pdbx_chem_comp_synonyms.name _pdbx_chem_comp_synonyms.provenance _pdbx_chem_comp_synonyms.type 1 15L "galactaro-1,5-lactone" PDB ? 2 15L "(2S,3R,4S,5R,6S)-3,4,5-trihydroxy-6-oxidotetrahydro-2H-pyran-2-carboxylate" PDB ? # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 15L C1 C1 C 0 1 N N N 80.281 94.193 -23.686 1.049 -1.340 -0.062 C1 15L 1 15L O1 O1 O 0 1 N N N 79.327 93.257 -23.367 1.620 -2.361 0.243 O1 15L 2 15L C2 C2 C 0 1 N N R 80.236 94.912 -25.090 1.820 -0.064 -0.316 C2 15L 3 15L O2 O2 O 0 1 N N N 79.471 94.337 -26.074 3.176 -0.228 0.105 O2 15L 4 15L C3 C3 C 0 1 N N S 81.486 95.628 -25.459 1.163 1.066 0.487 C3 15L 5 15L O3 O3 O 0 1 N N N 81.466 96.426 -26.591 1.761 2.315 0.132 O3 15L 6 15L C4 C4 C 0 1 N N R 82.349 95.983 -24.324 -0.333 1.103 0.162 C4 15L 7 15L O4 O4 O 0 1 N N N 82.152 97.171 -23.642 -0.512 1.338 -1.236 O4 15L 8 15L C5 C5 C 0 1 N N S 82.775 94.812 -23.540 -0.967 -0.239 0.539 C5 15L 9 15L O5 O5 O 0 1 N N N 81.642 94.048 -23.038 -0.294 -1.308 -0.191 O5 15L 10 15L C6 C6 C 0 1 N N N 83.919 94.897 -22.587 -2.429 -0.226 0.173 C6 15L 11 15L O6A O6A O 0 1 N N N 85.070 95.107 -22.949 -2.845 -0.974 -0.679 O6A 15L 12 15L O6B O6B O 0 1 N N N 83.641 94.571 -21.281 -3.269 0.618 0.794 O6B 15L 13 15L H2 H2 H 0 1 N N N 79.560 95.764 -24.927 1.793 0.176 -1.379 H2 15L 14 15L HO2 HO2 H 0 1 N N N 78.969 93.619 -25.707 3.646 -0.939 -0.351 HO2 15L 15 15L H3 H3 H 0 1 N N N 82.105 94.850 -25.929 1.303 0.885 1.553 H3 15L 16 15L HO3 HO3 H 0 1 N N N 82.320 96.823 -26.714 2.711 2.359 0.303 HO3 15L 17 15L H4 H4 H 0 1 N N N 83.249 96.348 -24.841 -0.809 1.903 0.729 H4 15L 18 15L HO4 HO4 H 0 1 N N N 82.790 97.245 -22.942 -1.438 1.374 -1.513 HO4 15L 19 15L H5 H5 H 0 1 N N N 83.297 94.243 -24.324 -0.861 -0.403 1.612 H5 15L 20 15L H8 H8 H 0 1 N N N 84.449 94.548 -20.781 -4.197 0.590 0.525 H8 15L 21 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 15L C1 O1 DOUB N N 1 15L C1 C2 SING N N 2 15L C1 O5 SING N N 3 15L C2 O2 SING N N 4 15L C2 C3 SING N N 5 15L C2 H2 SING N N 6 15L O2 HO2 SING N N 7 15L C3 O3 SING N N 8 15L C3 C4 SING N N 9 15L C3 H3 SING N N 10 15L O3 HO3 SING N N 11 15L C4 O4 SING N N 12 15L C4 C5 SING N N 13 15L C4 H4 SING N N 14 15L O4 HO4 SING N N 15 15L C5 O5 SING N N 16 15L C5 C6 SING N N 17 15L C5 H5 SING N N 18 15L C6 O6A DOUB N N 19 15L C6 O6B SING N N 20 15L O6B H8 SING N N 21 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 15L SMILES ACDLabs 12.01 "O=C(O)C1OC(=O)C(O)C(O)C1O" 15L SMILES_CANONICAL CACTVS 3.370 "O[C@H]1[C@@H](O)[C@H](OC(=O)[C@@H]1O)C(O)=O" 15L SMILES CACTVS 3.370 "O[CH]1[CH](O)[CH](OC(=O)[CH]1O)C(O)=O" 15L SMILES_CANONICAL "OpenEye OEToolkits" 1.7.0 "[C@@H]1([C@H]([C@H](OC(=O)[C@@H]1O)C(=O)O)O)O" 15L SMILES "OpenEye OEToolkits" 1.7.0 "C1(C(C(OC(=O)C1O)C(=O)O)O)O" 15L InChI InChI 1.03 "InChI=1S/C6H8O7/c7-1-2(8)4(5(10)11)13-6(12)3(1)9/h1-4,7-9H,(H,10,11)/t1-,2+,3+,4-/m0/s1" 15L InChIKey InChI 1.03 YLKFQNUGXOLRNI-KXMYSMCESA-N # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 15L "SYSTEMATIC NAME" ACDLabs 12.01 "(2S,3R,4S,5R)-3,4,5-trihydroxy-6-oxotetrahydro-2H-pyran-2-carboxylic acid (non-preferred name)" 15L "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.0 "(2S,3R,4S,5R)-3,4,5-trihydroxy-6-oxo-oxane-2-carboxylic acid" # # loop_ _pdbx_chem_comp_feature.comp_id _pdbx_chem_comp_feature.type _pdbx_chem_comp_feature.value _pdbx_chem_comp_feature.source _pdbx_chem_comp_feature.support 15L "CARBOHYDRATE ISOMER" D PDB ? 15L "CARBOHYDRATE RING" pyranose PDB ? 15L "CARBOHYDRATE PRIMARY CARBONYL GROUP" aldose PDB ? # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 15L "Create component" 2011-04-11 RCSB 15L "Modify descriptor" 2011-06-04 RCSB 15L "Other modification" 2020-07-03 RCSB 15L "Modify name" 2020-07-17 RCSB 15L "Modify synonyms" 2020-07-17 RCSB 15L "Modify linking type" 2020-07-17 RCSB ##