data_1CC # _chem_comp.id 1CC _chem_comp.name ;5-carboxy-2'-deoxycytidine monophosphate ; _chem_comp.type "DNA LINKING" _chem_comp.pdbx_type ATOMN _chem_comp.formula "C10 H14 N3 O9 P" _chem_comp.mon_nstd_parent_comp_id DC _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2011-11-17 _chem_comp.pdbx_modified_date 2012-02-10 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 351.207 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 1CC _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag Y _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 3UO7 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 1CC P P P 0 1 N N N 33.005 55.703 -3.065 4.735 1.130 0.305 P 1CC 1 1CC OP1 OP1 O 0 1 N N N 32.147 56.000 -4.432 5.879 0.231 0.030 OP1 1CC 2 1CC OP2 OP2 O 0 1 N N N 34.621 55.561 -3.307 4.466 2.064 -0.978 OP2 1CC 3 1CC "O5'" "O5'" O 0 1 N N N 32.576 56.540 -1.649 3.423 0.249 0.612 "O5'" 1CC 4 1CC "C5'" "C5'" C 0 1 N N N 32.770 57.942 -1.541 2.928 -0.748 -0.284 "C5'" 1CC 5 1CC "C4'" "C4'" C 0 1 N N R 32.022 58.447 -0.313 1.673 -1.391 0.312 "C4'" 1CC 6 1CC "C3'" "C3'" C 0 1 N N S 30.603 57.952 -0.374 1.169 -2.532 -0.600 "C3'" 1CC 7 1CC "C2'" "C2'" C 0 1 N N N 29.937 58.954 -1.298 -0.370 -2.427 -0.517 "C2'" 1CC 8 1CC "C1'" "C1'" C 0 1 N N R 30.728 60.217 -1.043 -0.614 -1.235 0.435 "C1'" 1CC 9 1CC "O4'" "O4'" O 0 1 N N N 31.922 59.867 -0.347 0.589 -0.438 0.348 "O4'" 1CC 10 1CC N1 N1 N 0 1 N N N 31.046 60.996 -2.240 -1.774 -0.459 -0.007 N1 1CC 11 1CC C6 C6 C 0 1 N N N 31.939 60.621 -3.169 -2.872 -0.406 0.775 C6 1CC 12 1CC C5 C5 C 0 1 N N N 32.226 61.439 -4.261 -3.964 0.330 0.349 C5 1CC 13 1CC C4 C4 C 0 1 N N N 31.585 62.665 -4.369 -3.867 1.020 -0.942 C4 1CC 14 1CC N4 N4 N 0 1 N N N 31.810 63.513 -5.401 -4.916 1.766 -1.418 N4 1CC 15 1CC N3 N3 N 0 1 N N N 30.700 63.041 -3.420 -2.746 0.909 -1.641 N3 1CC 16 1CC C2 C2 C 0 1 N N N 30.417 62.245 -2.358 -1.723 0.192 -1.180 C2 1CC 17 1CC O2 O2 O 0 1 N N N 29.592 62.599 -1.474 -0.709 0.114 -1.852 O2 1CC 18 1CC C21 C21 C 0 1 N N N 33.204 60.963 -5.305 -5.184 0.418 1.166 C21 1CC 19 1CC O22 O22 O 0 1 N N N 33.606 61.760 -6.202 -5.285 -0.242 2.181 O22 1CC 20 1CC O23 O23 O 0 1 N N N 33.556 59.747 -5.255 -6.191 1.232 0.789 O23 1CC 21 1CC "O3'" "O3'" O 0 1 N N N 30.070 58.025 0.958 1.612 -3.799 -0.108 "O3'" 1CC 22 1CC H2 H2 H 0 1 N N N 34.815 55.676 -4.230 3.729 2.680 -0.869 H2 1CC 23 1CC H3 H3 H 0 1 N N N 33.843 58.160 -1.436 2.680 -0.287 -1.240 H3 1CC 24 1CC H4 H4 H 0 1 N N N 32.381 58.440 -2.442 3.690 -1.512 -0.436 H4 1CC 25 1CC H5 H5 H 0 1 N N N 32.515 58.095 0.605 1.881 -1.769 1.313 H5 1CC 26 1CC H6 H6 H 0 1 N N N 30.552 56.935 -0.790 1.510 -2.381 -1.625 H6 1CC 27 1CC H7 H7 H 0 1 N N N 28.877 59.090 -1.038 -0.791 -2.222 -1.501 H7 1CC 28 1CC H8 H8 H 0 1 N N N 30.019 58.640 -2.349 -0.794 -3.341 -0.101 H8 1CC 29 1CC H9 H9 H 0 1 N N N 30.119 60.852 -0.383 -0.759 -1.589 1.456 H9 1CC 30 1CC H10 H10 H 0 1 N N N 32.443 59.671 -3.069 -2.899 -0.930 1.719 H10 1CC 31 1CC H11 H11 H 0 1 N N N 31.327 64.388 -5.444 -5.701 1.905 -0.866 H11 1CC 32 1CC H12 H12 H 0 1 N N N 32.459 63.264 -6.120 -4.873 2.154 -2.306 H12 1CC 33 1CC H13 H13 H 0 1 N N N 34.145 59.557 -5.976 -6.973 1.256 1.357 H13 1CC 34 1CC H14 H14 H 0 1 N N N 30.507 57.387 1.510 1.324 -4.551 -0.643 H14 1CC 35 1CC OP3 OP3 O 0 1 N Y N ? ? ? 5.072 2.053 1.580 OP3 1CC 36 1CC H16 H16 H 0 1 N N N ? ? ? 5.853 2.612 1.465 H16 1CC 37 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 1CC O22 C21 DOUB N N 1 1CC N4 C4 SING N N 2 1CC C21 O23 SING N N 3 1CC C21 C5 SING N N 4 1CC OP1 P DOUB N N 5 1CC C4 C5 SING N N 6 1CC C4 N3 DOUB N N 7 1CC C5 C6 DOUB N N 8 1CC N3 C2 SING N N 9 1CC OP2 P SING N N 10 1CC C6 N1 SING N N 11 1CC P "O5'" SING N N 12 1CC C2 N1 SING N N 13 1CC C2 O2 DOUB N N 14 1CC N1 "C1'" SING N N 15 1CC "O5'" "C5'" SING N N 16 1CC "C5'" "C4'" SING N N 17 1CC "C2'" "C1'" SING N N 18 1CC "C2'" "C3'" SING N N 19 1CC "C1'" "O4'" SING N N 20 1CC "C3'" "C4'" SING N N 21 1CC "C3'" "O3'" SING N N 22 1CC "O4'" "C4'" SING N N 23 1CC OP2 H2 SING N N 24 1CC "C5'" H3 SING N N 25 1CC "C5'" H4 SING N N 26 1CC "C4'" H5 SING N N 27 1CC "C3'" H6 SING N N 28 1CC "C2'" H7 SING N N 29 1CC "C2'" H8 SING N N 30 1CC "C1'" H9 SING N N 31 1CC C6 H10 SING N N 32 1CC N4 H11 SING N N 33 1CC N4 H12 SING N N 34 1CC O23 H13 SING N N 35 1CC "O3'" H14 SING N N 36 1CC P OP3 SING N N 37 1CC OP3 H16 SING N N 38 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 1CC SMILES ACDLabs 12.01 "O=C(O)C=1C(=NC(=O)N(C=1)C2OC(C(O)C2)COP(=O)(O)O)N" 1CC InChI InChI 1.03 "InChI=1S/C10H14N3O9P/c11-8-4(9(15)16)2-13(10(17)12-8)7-1-5(14)6(22-7)3-21-23(18,19)20/h2,5-7,14H,1,3H2,(H,15,16)(H2,11,12,17)(H2,18,19,20)/t5-,6+,7+/m0/s1" 1CC InChIKey InChI 1.03 WEUNVGZSKGOUOC-RRKCRQDMSA-N 1CC SMILES_CANONICAL CACTVS 3.370 "NC1=NC(=O)N(C=C1C(O)=O)[C@H]2C[C@H](O)[C@@H](CO[P](O)(O)=O)O2" 1CC SMILES CACTVS 3.370 "NC1=NC(=O)N(C=C1C(O)=O)[CH]2C[CH](O)[CH](CO[P](O)(O)=O)O2" 1CC SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "C1[C@@H]([C@H](O[C@H]1N2C=C(C(=NC2=O)N)C(=O)O)COP(=O)(O)O)O" 1CC SMILES "OpenEye OEToolkits" 1.7.6 "C1C(C(OC1N2C=C(C(=NC2=O)N)C(=O)O)COP(=O)(O)O)O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 1CC "SYSTEMATIC NAME" ACDLabs 12.01 ;5-carboxy-2'-deoxycytidine 5'-(dihydrogen phosphate) ; 1CC "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "4-azanyl-2-oxidanylidene-1-[(2R,4S,5R)-4-oxidanyl-5-(phosphonooxymethyl)oxolan-2-yl]pyrimidine-5-carboxylic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 1CC "Create component" 2011-11-17 RCSB 1CC "Modify internal type" 2011-11-17 RCSB 1CC "Modify name" 2011-11-17 RCSB #