data_1CF # _chem_comp.id 1CF _chem_comp.name "2-hydroxyethyl 6-deoxy-beta-L-galactopyranoside" _chem_comp.type L-saccharide _chem_comp.pdbx_type ATOMS _chem_comp.formula "C8 H16 O6" _chem_comp.mon_nstd_parent_comp_id FUL _chem_comp.pdbx_synonyms "2-hydroxyethyl 6-deoxy-beta-L-galactoside; 2-hydroxyethyl 6-deoxy-L-galactoside; 2-hydroxyethyl 6-deoxy-galactoside" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2012-12-04 _chem_comp.pdbx_modified_date 2020-07-17 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 208.209 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 1CF _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 2LYG _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _pdbx_chem_comp_synonyms.ordinal _pdbx_chem_comp_synonyms.comp_id _pdbx_chem_comp_synonyms.name _pdbx_chem_comp_synonyms.provenance _pdbx_chem_comp_synonyms.type 1 1CF "2-hydroxyethyl 6-deoxy-beta-L-galactoside" PDB ? 2 1CF "2-hydroxyethyl 6-deoxy-L-galactoside" PDB ? 3 1CF "2-hydroxyethyl 6-deoxy-galactoside" PDB ? # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 1CF C4 C4 C 0 1 N N S 4.842 8.125 -0.062 2.349 0.563 -0.025 C4 1CF 1 1CF C5 C5 C 0 1 N N S 4.527 7.393 -1.377 1.309 1.482 -0.671 C5 1CF 2 1CF C6 C6 C 0 1 N N N 3.270 6.551 -1.339 1.602 2.933 -0.286 C6 1CF 3 1CF C11 C11 C 0 1 N N N 8.100 6.475 -4.645 -4.089 -0.093 -0.168 C11 1CF 4 1CF C12 C12 C 0 1 N N N 8.800 6.753 -3.315 -2.721 0.246 -0.766 C12 1CF 5 1CF C3 C3 C 0 1 N N R 6.170 8.882 -0.230 2.016 -0.893 -0.365 C3 1CF 6 1CF O11 O11 O 0 1 N N N 8.953 6.567 -5.769 -4.154 0.389 1.176 O11 1CF 7 1CF C1 C1 C 0 1 N N S 6.916 7.221 -1.904 -0.381 -0.218 -0.540 C1 1CF 8 1CF C2 C2 C 0 1 N N S 7.281 7.919 -0.605 0.593 -1.204 0.110 C2 1CF 9 1CF O2 O2 O 0 1 N N N 8.471 8.698 -0.794 0.244 -2.538 -0.266 O2 1CF 10 1CF O3 O3 O 0 1 N N N 6.640 9.551 0.956 2.940 -1.762 0.293 O3 1CF 11 1CF O4 O4 O 0 1 N N N 4.970 7.135 0.976 2.329 0.739 1.392 O4 1CF 12 1CF O5 O5 O 0 1 N N N 5.642 6.503 -1.736 0.005 1.121 -0.210 O5 1CF 13 1CF O1 O1 O 0 1 N N N 8.002 6.311 -2.231 -1.703 -0.465 -0.059 O1 1CF 14 1CF H4 H4 H 0 1 N N N 4.036 8.837 0.168 3.340 0.808 -0.409 H4 1CF 15 1CF H5 H5 H 0 1 N N N 4.410 8.150 -2.166 1.353 1.377 -1.755 H5 1CF 16 1CF H61 H62 H 0 1 N N N 2.411 7.185 -1.073 2.597 3.208 -0.637 H61 1CF 17 1CF H62 H61 H 0 1 N N N 3.100 6.101 -2.328 0.861 3.588 -0.746 H62 1CF 18 1CF H63 H63 H 0 1 N N N 3.385 5.755 -0.589 1.557 3.038 0.798 H63 1CF 19 1CF H11 H11 H 0 1 N N N 7.285 7.204 -4.767 -4.872 0.379 -0.762 H11 1CF 20 1CF H12 H12 H 0 1 N N N 7.680 5.459 -4.610 -4.230 -1.173 -0.173 H12 1CF 21 1CF H21 H21 H 0 1 N N N 9.763 6.222 -3.295 -2.703 -0.042 -1.817 H21 1CF 22 1CF H22 H22 H 0 1 N N N 8.975 7.835 -3.218 -2.543 1.318 -0.679 H22 1CF 23 1CF H3 H3 H 0 1 N N N 6.051 9.613 -1.043 2.082 -1.040 -1.443 H3 1CF 24 1CF H6 H6 H 0 1 N N N 8.458 6.384 -6.559 -4.995 0.209 1.618 H6 1CF 25 1CF H1 H1 H 0 1 N N N 6.811 7.976 -2.697 -0.358 -0.346 -1.622 H1 1CF 26 1CF H2 H2 H 0 1 N N N 7.417 7.175 0.194 0.542 -1.105 1.194 H2 1CF 27 1CF HO2 HO2 H 0 1 N Y N 8.697 9.134 0.019 -0.648 -2.800 0.000 HO2 1CF 28 1CF HO3 HO3 H 0 1 N Y N 5.986 10.175 1.248 2.787 -2.701 0.122 HO3 1CF 29 1CF HO4 HO4 H 0 1 N Y N 5.165 7.564 1.801 2.530 1.640 1.680 HO4 1CF 30 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 1CF O11 C11 SING N N 1 1CF C11 C12 SING N N 2 1CF C12 O1 SING N N 3 1CF O1 C1 SING N N 4 1CF C1 O5 SING N N 5 1CF C1 C2 SING N N 6 1CF O5 C5 SING N N 7 1CF C5 C6 SING N N 8 1CF C5 C4 SING N N 9 1CF O2 C2 SING N N 10 1CF C2 C3 SING N N 11 1CF C3 C4 SING N N 12 1CF C3 O3 SING N N 13 1CF C4 O4 SING N N 14 1CF C4 H4 SING N N 15 1CF C5 H5 SING N N 16 1CF C6 H61 SING N N 17 1CF C6 H62 SING N N 18 1CF C6 H63 SING N N 19 1CF C11 H11 SING N N 20 1CF C11 H12 SING N N 21 1CF C12 H21 SING N N 22 1CF C12 H22 SING N N 23 1CF C3 H3 SING N N 24 1CF O11 H6 SING N N 25 1CF C1 H1 SING N N 26 1CF C2 H2 SING N N 27 1CF O2 HO2 SING N N 28 1CF O3 HO3 SING N N 29 1CF O4 HO4 SING N N 30 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 1CF SMILES ACDLabs 12.01 "O(CCO)C1OC(C(O)C(O)C1O)C" 1CF InChI InChI 1.03 "InChI=1S/C8H16O6/c1-4-5(10)6(11)7(12)8(14-4)13-3-2-9/h4-12H,2-3H2,1H3/t4-,5+,6+,7-,8-/m0/s1" 1CF InChIKey InChI 1.03 WEKZOSZDHREWIU-SHGPDSBTSA-N 1CF SMILES_CANONICAL CACTVS 3.370 "C[C@@H]1O[C@H](OCCO)[C@@H](O)[C@H](O)[C@@H]1O" 1CF SMILES CACTVS 3.370 "C[CH]1O[CH](OCCO)[CH](O)[CH](O)[CH]1O" 1CF SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "C[C@H]1[C@H]([C@H]([C@@H]([C@H](O1)OCCO)O)O)O" 1CF SMILES "OpenEye OEToolkits" 1.7.6 "CC1C(C(C(C(O1)OCCO)O)O)O" # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 1CF "SYSTEMATIC NAME" ACDLabs 12.01 "2-hydroxyethyl 6-deoxy-beta-L-galactopyranoside" 1CF "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "(2S,3S,4R,5S,6S)-2-(2-hydroxyethyloxy)-6-methyl-oxane-3,4,5-triol" # _pdbx_chem_comp_related.comp_id 1CF _pdbx_chem_comp_related.related_comp_id FUL _pdbx_chem_comp_related.relationship_type "Carbohydrate core" _pdbx_chem_comp_related.details ? # # loop_ _pdbx_chem_comp_atom_related.ordinal _pdbx_chem_comp_atom_related.comp_id _pdbx_chem_comp_atom_related.atom_id _pdbx_chem_comp_atom_related.related_comp_id _pdbx_chem_comp_atom_related.related_atom_id _pdbx_chem_comp_atom_related.related_type 1 1CF C1 FUL C1 "Carbohydrate core" 2 1CF C2 FUL C2 "Carbohydrate core" 3 1CF C3 FUL C3 "Carbohydrate core" 4 1CF C4 FUL C4 "Carbohydrate core" 5 1CF C5 FUL C5 "Carbohydrate core" 6 1CF C6 FUL C6 "Carbohydrate core" 7 1CF O1 FUL O1 "Carbohydrate core" 8 1CF O2 FUL O2 "Carbohydrate core" 9 1CF O3 FUL O3 "Carbohydrate core" 10 1CF O4 FUL O4 "Carbohydrate core" 11 1CF O5 FUL O5 "Carbohydrate core" 12 1CF H1 FUL H1 "Carbohydrate core" 13 1CF H2 FUL H2 "Carbohydrate core" 14 1CF H3 FUL H3 "Carbohydrate core" 15 1CF H4 FUL H4 "Carbohydrate core" 16 1CF H5 FUL H5 "Carbohydrate core" 17 1CF H62 FUL H62 "Carbohydrate core" 18 1CF H61 FUL H61 "Carbohydrate core" 19 1CF H63 FUL H63 "Carbohydrate core" 20 1CF HO2 FUL HO2 "Carbohydrate core" 21 1CF HO3 FUL HO3 "Carbohydrate core" 22 1CF HO4 FUL HO4 "Carbohydrate core" # # loop_ _pdbx_chem_comp_feature.comp_id _pdbx_chem_comp_feature.type _pdbx_chem_comp_feature.value _pdbx_chem_comp_feature.source _pdbx_chem_comp_feature.support 1CF "CARBOHYDRATE ISOMER" L PDB ? 1CF "CARBOHYDRATE RING" pyranose PDB ? 1CF "CARBOHYDRATE ANOMER" beta PDB ? 1CF "CARBOHYDRATE PRIMARY CARBONYL GROUP" aldose PDB ? # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 1CF "Create component" 2012-12-04 RCSB 1CF "Initial release" 2014-01-29 RCSB 1CF "Other modification" 2020-07-03 RCSB 1CF "Modify parent residue" 2020-07-17 RCSB 1CF "Modify synonyms" 2020-07-17 RCSB 1CF "Modify internal type" 2020-07-17 RCSB 1CF "Modify linking type" 2020-07-17 RCSB 1CF "Modify atom id" 2020-07-17 RCSB 1CF "Modify component atom id" 2020-07-17 RCSB 1CF "Modify leaving atom flag" 2020-07-17 RCSB ##