data_1FC # _chem_comp.id 1FC _chem_comp.name "4-amino-1-(2-deoxy-2-fluoro-5-O-phosphono-beta-D-arabinofuranosyl)-2-oxo-1,2-dihydropyrimidine-5-carboxylic acid" _chem_comp.type "DNA LINKING" _chem_comp.pdbx_type ATOMN _chem_comp.formula "C10 H13 F N3 O9 P" _chem_comp.mon_nstd_parent_comp_id DC _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2011-11-17 _chem_comp.pdbx_modified_date 2012-02-10 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 369.197 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 1FC _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag Y _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 3UOB _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 1FC F24 F24 F 0 1 N N N 26.275 -61.043 1.788 0.906 2.288 -1.338 F24 1FC 1 1FC "C2'" "C2'" C 0 1 N N S 27.238 -61.037 0.798 0.349 2.341 -0.056 "C2'" 1FC 2 1FC "C3'" "C3'" C 0 1 N N R 27.733 -59.655 0.310 -1.190 2.461 -0.139 "C3'" 1FC 3 1FC "O3'" "O3'" O 0 1 N N N 27.593 -59.382 -1.088 -1.638 3.630 0.549 "O3'" 1FC 4 1FC "C4'" "C4'" C 0 1 N N R 29.243 -59.633 0.488 -1.704 1.187 0.567 "C4'" 1FC 5 1FC "C5'" "C5'" C 0 1 N N N 29.692 -58.307 1.092 -2.951 0.653 -0.140 "C5'" 1FC 6 1FC "O5'" "O5'" O 0 1 N N N 30.796 -58.503 1.967 -3.478 -0.454 0.594 "O5'" 1FC 7 1FC P P P 0 1 N N N 31.076 -57.531 3.325 -4.793 -1.264 0.137 P 1FC 8 1FC OP2 OP2 O 0 1 N N N 32.669 -57.352 3.660 -6.073 -0.291 0.207 OP2 1FC 9 1FC OP1 OP1 O 0 1 N N N 30.188 -57.746 4.669 -4.616 -1.748 -1.250 OP1 1FC 10 1FC "C1'" "C1'" C 0 1 N N R 28.531 -61.702 1.265 0.581 1.008 0.691 "C1'" 1FC 11 1FC "O4'" "O4'" O 0 1 N N N 29.567 -60.723 1.350 -0.619 0.240 0.457 "O4'" 1FC 12 1FC N1 N1 N 0 1 N N N 28.617 -62.704 2.345 1.747 0.312 0.140 N1 1FC 13 1FC C6 C6 C 0 1 N N N 29.501 -62.575 3.349 2.836 0.130 0.916 C6 1FC 14 1FC C5 C5 C 0 1 N N N 29.659 -63.563 4.326 3.932 -0.529 0.387 C5 1FC 15 1FC C21 C21 C 0 1 N N N 30.650 -63.320 5.460 5.143 -0.753 1.192 C21 1FC 16 1FC O23 O23 O 0 1 N N N 31.078 -64.252 6.187 6.154 -1.495 0.698 O23 1FC 17 1FC O22 O22 O 0 1 N N N 31.043 -62.143 5.661 5.231 -0.269 2.304 O22 1FC 18 1FC C4 C4 C 0 1 N N N 28.896 -64.723 4.187 3.851 -0.997 -1.002 C4 1FC 19 1FC N4 N4 N 0 1 N N N 28.942 -65.752 5.053 4.905 -1.656 -1.581 N4 1FC 20 1FC N3 N3 N 0 1 N N N 28.047 -64.869 3.160 2.737 -0.771 -1.685 N3 1FC 21 1FC C2 C2 C 0 1 N N N 27.897 -63.901 2.232 1.709 -0.136 -1.125 C2 1FC 22 1FC O2 O2 O 0 1 N N N 27.105 -64.045 1.276 0.701 0.048 -1.785 O2 1FC 23 1FC H1 H1 H 0 1 N N N 26.873 -61.589 -0.081 0.769 3.173 0.509 H1 1FC 24 1FC H2 H2 H 0 1 N N N 27.272 -58.863 0.918 -1.516 2.479 -1.178 H2 1FC 25 1FC H3 H3 H 0 1 N N N 26.671 -59.371 -1.318 -1.344 4.460 0.148 H3 1FC 26 1FC H4 H4 H 0 1 N N N 29.724 -59.763 -0.493 -1.923 1.395 1.615 H4 1FC 27 1FC H5 H5 H 0 1 N N N 29.989 -57.624 0.283 -3.702 1.441 -0.198 H5 1FC 28 1FC H6 H6 H 0 1 N N N 28.857 -57.866 1.657 -2.687 0.328 -1.147 H6 1FC 29 1FC H7 H7 H 0 1 N N N 32.804 -57.405 4.599 -6.249 0.064 1.089 H7 1FC 30 1FC H9 H9 H 0 1 N N N 28.820 -62.286 0.379 0.715 1.189 1.757 H9 1FC 31 1FC H10 H10 H 0 1 N N N 30.107 -61.683 3.403 2.851 0.492 1.933 H10 1FC 32 1FC H11 H11 H 0 1 N N N 31.682 -63.900 6.830 6.928 -1.614 1.264 H11 1FC 33 1FC H12 H12 H 0 1 N N N 28.365 -66.556 4.906 5.684 -1.886 -1.050 H12 1FC 34 1FC H13 H13 H 0 1 N N N 29.553 -65.713 5.844 4.872 -1.893 -2.521 H13 1FC 35 1FC OP3 OP3 O 0 1 N Y N ? ? ? -5.018 -2.520 1.119 OP3 1FC 36 1FC H8 H8 H 0 1 N Y N ? ? ? -5.794 -3.054 0.903 H8 1FC 37 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 1FC "O3'" "C3'" SING N N 1 1FC "C3'" "C4'" SING N N 2 1FC "C3'" "C2'" SING N N 3 1FC "C4'" "C5'" SING N N 4 1FC "C4'" "O4'" SING N N 5 1FC "C2'" "C1'" SING N N 6 1FC "C2'" F24 SING N N 7 1FC "C5'" "O5'" SING N N 8 1FC "C1'" "O4'" SING N N 9 1FC "C1'" N1 SING N N 10 1FC O2 C2 DOUB N N 11 1FC "O5'" P SING N N 12 1FC C2 N1 SING N N 13 1FC C2 N3 SING N N 14 1FC N1 C6 SING N N 15 1FC N3 C4 DOUB N N 16 1FC P OP2 SING N N 17 1FC P OP1 DOUB N N 18 1FC C6 C5 DOUB N N 19 1FC C4 C5 SING N N 20 1FC C4 N4 SING N N 21 1FC C5 C21 SING N N 22 1FC C21 O22 DOUB N N 23 1FC C21 O23 SING N N 24 1FC "C2'" H1 SING N N 25 1FC "C3'" H2 SING N N 26 1FC "O3'" H3 SING N N 27 1FC "C4'" H4 SING N N 28 1FC "C5'" H5 SING N N 29 1FC "C5'" H6 SING N N 30 1FC OP2 H7 SING N N 31 1FC "C1'" H9 SING N N 32 1FC C6 H10 SING N N 33 1FC O23 H11 SING N N 34 1FC N4 H12 SING N N 35 1FC N4 H13 SING N N 36 1FC P OP3 SING N N 37 1FC OP3 H8 SING N N 38 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 1FC SMILES ACDLabs 12.01 "O=C(O)C=1C(=NC(=O)N(C=1)C2OC(C(O)C2F)COP(=O)(O)O)N" 1FC InChI InChI 1.03 "InChI=1S/C10H13FN3O9P/c11-5-6(15)4(2-22-24(19,20)21)23-8(5)14-1-3(9(16)17)7(12)13-10(14)18/h1,4-6,8,15H,2H2,(H,16,17)(H2,12,13,18)(H2,19,20,21)/t4-,5+,6-,8-/m1/s1" 1FC InChIKey InChI 1.03 RSWNDZRKHUVSHC-BYPJNBLXSA-N 1FC SMILES_CANONICAL CACTVS 3.370 "NC1=NC(=O)N(C=C1C(O)=O)[C@@H]2O[C@H](CO[P](O)(O)=O)[C@@H](O)[C@@H]2F" 1FC SMILES CACTVS 3.370 "NC1=NC(=O)N(C=C1C(O)=O)[CH]2O[CH](CO[P](O)(O)=O)[CH](O)[CH]2F" 1FC SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "C1=C(C(=NC(=O)N1[C@H]2[C@H]([C@@H]([C@H](O2)COP(=O)(O)O)O)F)N)C(=O)O" 1FC SMILES "OpenEye OEToolkits" 1.7.6 "C1=C(C(=NC(=O)N1C2C(C(C(O2)COP(=O)(O)O)O)F)N)C(=O)O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 1FC "SYSTEMATIC NAME" ACDLabs 12.01 "4-amino-1-(2-deoxy-2-fluoro-5-O-phosphono-beta-D-arabinofuranosyl)-2-oxo-1,2-dihydropyrimidine-5-carboxylic acid" 1FC "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "4-azanyl-1-[(2R,3S,4R,5R)-3-fluoranyl-4-oxidanyl-5-(phosphonooxymethyl)oxolan-2-yl]-2-oxidanylidene-pyrimidine-5-carboxylic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 1FC "Create component" 2011-11-17 RCSB 1FC "Modify parent residue" 2011-11-17 RCSB 1FC "Modify internal type" 2011-11-17 RCSB #