data_1FE # _chem_comp.id 1FE _chem_comp.name "N-(2-oxo-2,3-dihydro-1H-benzimidazol-5-yl)glycinamide" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C9 H10 N4 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2013-01-15 _chem_comp.pdbx_modified_date 2013-02-01 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 206.201 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 1FE _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 4IDK _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 1FE O2 O2 O 0 1 N N N 31.722 -5.575 0.315 -4.531 -1.430 0.035 O2 1FE 1 1FE C6 C6 C 0 1 N N N 30.482 -5.005 0.147 -3.486 -0.807 0.012 C6 1FE 2 1FE N2 N2 N 0 1 N N N 29.292 -5.391 0.680 -3.364 0.512 0.255 N2 1FE 3 1FE N3 N3 N 0 1 N N N 30.186 -3.915 -0.609 -2.275 -1.333 -0.254 N3 1FE 4 1FE C7 C7 C 0 1 Y N N 28.788 -3.559 -0.581 -1.329 -0.313 -0.186 C7 1FE 5 1FE C5 C5 C 0 1 Y N N 28.186 -4.536 0.273 -2.018 0.857 0.137 C5 1FE 6 1FE C4 C4 C 0 1 Y N N 26.737 -4.472 0.530 -1.328 2.052 0.275 C4 1FE 7 1FE C3 C3 C 0 1 Y N N 25.983 -3.474 -0.058 0.039 2.083 0.092 C3 1FE 8 1FE C8 C8 C 0 1 Y N N 27.988 -2.492 -1.203 0.045 -0.279 -0.366 C8 1FE 9 1FE C2 C2 C 0 1 Y N N 26.634 -2.434 -0.968 0.729 0.920 -0.229 C2 1FE 10 1FE N1 N1 N 0 1 N N N 25.809 -1.420 -1.567 2.117 0.957 -0.411 N1 1FE 11 1FE C1 C1 C 0 1 N N N 26.148 -0.495 -2.608 2.876 -0.088 -0.025 C1 1FE 12 1FE O1 O1 O 0 1 N N N 27.258 -0.467 -3.119 2.350 -1.094 0.402 O1 1FE 13 1FE C9 C9 C 0 1 N N N 25.108 0.470 -3.073 4.378 -0.006 -0.124 C9 1FE 14 1FE N4 N4 N 0 1 N N N 25.681 1.361 -4.049 4.969 -1.263 0.354 N4 1FE 15 1FE H1 H1 H 0 1 N N N 29.188 -6.179 1.287 -4.089 1.118 0.475 H1 1FE 16 1FE H2 H2 H 0 1 N N N 30.871 -3.409 -1.134 -2.094 -2.263 -0.460 H2 1FE 17 1FE H3 H3 H 0 1 N N N 26.267 -5.200 1.174 -1.861 2.958 0.524 H3 1FE 18 1FE H4 H4 H 0 1 N N N 24.920 -3.429 0.128 0.576 3.014 0.199 H4 1FE 19 1FE H5 H5 H 0 1 N N N 28.461 -1.759 -1.840 0.581 -1.183 -0.616 H5 1FE 20 1FE H6 H6 H 0 1 N N N 24.877 -1.351 -1.211 2.533 1.735 -0.814 H6 1FE 21 1FE H7 H7 H 0 1 N N N 24.740 1.053 -2.216 4.665 0.159 -1.163 H7 1FE 22 1FE H8 H8 H 0 1 N N N 24.272 -0.082 -3.527 4.738 0.821 0.488 H8 1FE 23 1FE H9 H9 H 0 1 N N N 24.984 2.007 -4.360 4.601 -2.052 -0.155 H9 1FE 24 1FE H10 H10 H 0 1 N N N 26.441 1.863 -3.636 5.976 -1.233 0.298 H10 1FE 25 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 1FE N4 C9 SING N N 1 1FE O1 C1 DOUB N N 2 1FE C9 C1 SING N N 3 1FE C1 N1 SING N N 4 1FE N1 C2 SING N N 5 1FE C8 C2 DOUB Y N 6 1FE C8 C7 SING Y N 7 1FE C2 C3 SING Y N 8 1FE N3 C7 SING N N 9 1FE N3 C6 SING N N 10 1FE C7 C5 DOUB Y N 11 1FE C3 C4 DOUB Y N 12 1FE C6 O2 DOUB N N 13 1FE C6 N2 SING N N 14 1FE C5 C4 SING Y N 15 1FE C5 N2 SING N N 16 1FE N2 H1 SING N N 17 1FE N3 H2 SING N N 18 1FE C4 H3 SING N N 19 1FE C3 H4 SING N N 20 1FE C8 H5 SING N N 21 1FE N1 H6 SING N N 22 1FE C9 H7 SING N N 23 1FE C9 H8 SING N N 24 1FE N4 H9 SING N N 25 1FE N4 H10 SING N N 26 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 1FE SMILES ACDLabs 12.01 "O=C(Nc1ccc2c(c1)NC(=O)N2)CN" 1FE InChI InChI 1.03 "InChI=1S/C9H10N4O2/c10-4-8(14)11-5-1-2-6-7(3-5)13-9(15)12-6/h1-3H,4,10H2,(H,11,14)(H2,12,13,15)" 1FE InChIKey InChI 1.03 VRPBYMLDIVHQOX-UHFFFAOYSA-N 1FE SMILES_CANONICAL CACTVS 3.370 "NCC(=O)Nc1ccc2NC(=O)Nc2c1" 1FE SMILES CACTVS 3.370 "NCC(=O)Nc1ccc2NC(=O)Nc2c1" 1FE SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "c1cc2c(cc1NC(=O)CN)NC(=O)N2" 1FE SMILES "OpenEye OEToolkits" 1.7.6 "c1cc2c(cc1NC(=O)CN)NC(=O)N2" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 1FE "SYSTEMATIC NAME" ACDLabs 12.01 "N-(2-oxo-2,3-dihydro-1H-benzimidazol-5-yl)glycinamide" 1FE "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "2-azanyl-N-(2-oxidanylidene-1,3-dihydrobenzimidazol-5-yl)ethanamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 1FE "Create component" 2013-01-15 RCSB 1FE "Initial release" 2013-02-01 RCSB #