data_1IK # _chem_comp.id 1IK _chem_comp.name "(S)-2-((3-(6-amino-9H-purin-9-yl)propyl)amino)-3-phosphonopropanoic acid" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C11 H17 N6 O5 P" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2021-06-11 _chem_comp.pdbx_modified_date 2021-12-03 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 344.264 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 1IK _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7OTX _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 1IK C02 C1 C 0 1 Y N N -9.130 -49.697 132.161 -5.867 0.245 -0.632 C02 1IK 1 1IK C04 C2 C 0 1 Y N N -7.890 -51.671 131.759 -4.899 -1.847 -0.757 C04 1IK 2 1IK C06 C3 C 0 1 Y N N -6.659 -49.724 131.927 -3.697 -0.208 0.316 C06 1IK 3 1IK C07 C4 C 0 1 Y N N -7.885 -48.972 132.151 -4.735 0.704 0.062 C07 1IK 4 1IK C09 C5 C 0 1 Y N N -6.173 -47.559 132.198 -3.184 1.772 1.139 C09 1IK 5 1IK C11 C6 C 0 1 N N N -4.111 -49.068 131.788 -1.456 -0.034 1.479 C11 1IK 6 1IK C12 C7 C 0 1 N N N -3.285 -47.806 131.403 -0.420 0.026 0.354 C12 1IK 7 1IK C13 C8 C 0 1 N N N -2.613 -47.878 129.970 0.914 -0.525 0.859 C13 1IK 8 1IK C15 C9 C 0 1 N N S -4.250 -46.034 129.304 3.206 -0.989 0.229 C15 1IK 9 1IK C16 C10 C 0 1 N N N -4.168 -44.730 130.174 3.223 -2.489 0.077 C16 1IK 10 1IK C19 C11 C 0 1 N N N -4.880 -45.743 127.975 4.323 -0.377 -0.618 C19 1IK 11 1IK N01 N1 N 0 1 N N N -10.399 -49.078 132.369 -6.920 1.098 -0.911 N01 1IK 12 1IK N03 N2 N 0 1 Y N N -9.104 -51.047 131.962 -5.900 -1.026 -1.018 N03 1IK 13 1IK N05 N3 N 0 1 Y N N -6.656 -51.083 131.729 -3.822 -1.463 -0.105 N05 1IK 14 1IK N08 N4 N 0 1 Y N N -7.539 -47.621 132.315 -4.358 1.893 0.590 N08 1IK 15 1IK N10 N5 N 0 1 Y N N -5.611 -48.815 131.963 -2.734 0.493 0.996 N10 1IK 16 1IK N14 N6 N 0 1 N N N -2.825 -46.629 129.174 1.908 -0.467 -0.221 N14 1IK 17 1IK O17 O1 O 0 1 N N N -3.563 -44.745 131.306 4.315 -3.186 0.428 O17 1IK 18 1IK O18 O2 O 0 1 N N N -4.711 -43.629 129.763 2.255 -3.063 -0.361 O18 1IK 19 1IK O21 O3 O 0 1 N N N -7.059 -46.092 126.446 4.550 1.673 1.130 O21 1IK 20 1IK O22 O4 O 0 1 N N N -7.403 -45.749 128.918 5.655 2.043 -1.109 O22 1IK 21 1IK O23 O5 O 0 1 N N N -6.444 -47.926 128.126 3.040 2.107 -0.845 O23 1IK 22 1IK P20 P1 P 0 1 N N N -6.574 -46.428 127.847 4.397 1.419 -0.320 P20 1IK 23 1IK H1 H1 H 0 1 N N N -7.918 -52.740 131.607 -4.968 -2.872 -1.089 H1 1IK 24 1IK H2 H2 H 0 1 N N N -5.601 -46.647 132.278 -2.646 2.567 1.633 H2 1IK 25 1IK H3 H3 H 0 1 N N N -3.979 -49.820 130.996 -1.587 -1.069 1.797 H3 1IK 26 1IK H4 H4 H 0 1 N N N -3.716 -49.461 132.736 -1.111 0.564 2.323 H4 1IK 27 1IK H5 H5 H 0 1 N N N -2.489 -47.674 132.150 -0.765 -0.572 -0.489 H5 1IK 28 1IK H6 H6 H 0 1 N N N -3.956 -46.935 131.425 -0.289 1.061 0.036 H6 1IK 29 1IK H7 H7 H 0 1 N N N -3.047 -48.725 129.419 1.259 0.073 1.703 H7 1IK 30 1IK H8 H8 H 0 1 N N N -1.532 -48.037 130.095 0.784 -1.559 1.177 H8 1IK 31 1IK H9 H9 H 0 1 N N N -4.877 -46.761 129.842 3.359 -0.729 1.276 H9 1IK 32 1IK H10 H10 H 0 1 N N N -4.258 -46.186 127.183 5.276 -0.831 -0.345 H10 1IK 33 1IK H11 H11 H 0 1 N N N -4.927 -44.653 127.837 4.122 -0.563 -1.674 H11 1IK 34 1IK H12 H12 H 0 1 N N N -11.118 -49.772 132.335 -6.883 2.024 -0.627 H12 1IK 35 1IK H13 H13 H 0 1 N N N -10.409 -48.631 133.264 -7.697 0.769 -1.391 H13 1IK 36 1IK H14 H14 H 0 1 N N N -2.658 -46.838 128.210 2.001 0.473 -0.577 H14 1IK 37 1IK H16 H16 H 0 1 N N N -3.608 -43.882 131.701 4.280 -4.145 0.312 H16 1IK 38 1IK H17 H17 H 0 1 N N N -8.085 -45.229 128.509 5.756 2.998 -0.996 H17 1IK 39 1IK H18 H18 H 0 1 N N N -6.696 -48.416 127.352 2.875 1.981 -1.790 H18 1IK 40 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 1IK O21 P20 DOUB N N 1 1IK P20 C19 SING N N 2 1IK P20 O23 SING N N 3 1IK P20 O22 SING N N 4 1IK C19 C15 SING N N 5 1IK N14 C15 SING N N 6 1IK N14 C13 SING N N 7 1IK C15 C16 SING N N 8 1IK O18 C16 DOUB N N 9 1IK C13 C12 SING N N 10 1IK C16 O17 SING N N 11 1IK C12 C11 SING N N 12 1IK N05 C04 DOUB Y N 13 1IK N05 C06 SING Y N 14 1IK C04 N03 SING Y N 15 1IK C11 N10 SING N N 16 1IK C06 N10 SING Y N 17 1IK C06 C07 DOUB Y N 18 1IK N03 C02 DOUB Y N 19 1IK N10 C09 SING Y N 20 1IK C07 C02 SING Y N 21 1IK C07 N08 SING Y N 22 1IK C02 N01 SING N N 23 1IK C09 N08 DOUB Y N 24 1IK C04 H1 SING N N 25 1IK C09 H2 SING N N 26 1IK C11 H3 SING N N 27 1IK C11 H4 SING N N 28 1IK C12 H5 SING N N 29 1IK C12 H6 SING N N 30 1IK C13 H7 SING N N 31 1IK C13 H8 SING N N 32 1IK C15 H9 SING N N 33 1IK C19 H10 SING N N 34 1IK C19 H11 SING N N 35 1IK N01 H12 SING N N 36 1IK N01 H13 SING N N 37 1IK N14 H14 SING N N 38 1IK O17 H16 SING N N 39 1IK O22 H17 SING N N 40 1IK O23 H18 SING N N 41 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 1IK InChI InChI 1.03 "InChI=1S/C11H17N6O5P/c12-9-8-10(15-5-14-9)17(6-16-8)3-1-2-13-7(11(18)19)4-23(20,21)22/h5-7,13H,1-4H2,(H,18,19)(H2,12,14,15)(H2,20,21,22)/t7-/m1/s1" 1IK InChIKey InChI 1.03 CFXXIYRDSBDIPF-SSDOTTSWSA-N 1IK SMILES_CANONICAL CACTVS 3.385 "Nc1ncnc2n(CCCN[C@H](C[P](O)(O)=O)C(O)=O)cnc12" 1IK SMILES CACTVS 3.385 "Nc1ncnc2n(CCCN[CH](C[P](O)(O)=O)C(O)=O)cnc12" 1IK SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1nc(c2c(n1)n(cn2)CCCN[C@H](CP(=O)(O)O)C(=O)O)N" 1IK SMILES "OpenEye OEToolkits" 2.0.7 "c1nc(c2c(n1)n(cn2)CCCNC(CP(=O)(O)O)C(=O)O)N" # _pdbx_chem_comp_identifier.comp_id 1IK _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(2~{S})-2-[3-(6-aminopurin-9-yl)propylamino]-3-phosphono-propanoic acid" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 1IK "Create component" 2021-06-11 PDBE 1IK "Initial release" 2021-12-08 RCSB ##