data_1QI # _chem_comp.id 1QI _chem_comp.name "(2R,4S,5S)-5-azanyl-6-methyl-4-oxidanyl-2-(phenylmethyl)heptanoic acid" _chem_comp.type "peptide linking" _chem_comp.pdbx_type ATOMP _chem_comp.formula "C15 H23 N O3" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2021-06-14 _chem_comp.pdbx_modified_date 2024-09-27 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 265.348 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 1QI _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7OUP _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE _chem_comp.pdbx_pcm Y # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 1QI C1 C1 C 0 1 N N N N N N 133.649 -24.141 86.306 1.564 -0.823 -1.099 C1 1QI 1 1QI C2 C2 C 0 1 N N R Y N N 134.587 -23.693 85.197 0.470 -0.234 -0.206 C2 1QI 2 1QI C3 C3 C 0 1 N N N Y N N 135.220 -22.397 85.692 -0.903 -0.586 -0.781 C3 1QI 3 1QI C4 C4 C 0 1 N N S Y N N 136.674 -22.449 86.114 -1.995 -0.105 0.176 C4 1QI 4 1QI CA C5 C 0 1 N N S Y N N 137.061 -20.995 86.458 -3.368 -0.344 -0.456 C5 1QI 5 1QI O1 O1 O 0 1 N N N N N N 136.795 -23.254 87.234 -1.904 -0.828 1.405 O1 1QI 6 1QI O O O 0 1 N N N Y N Y 133.083 -22.269 84.126 -0.276 1.978 -0.528 O 1QI 7 1QI C8 C8 C 0 1 Y N N N N N 133.058 -25.557 86.090 2.911 -0.583 -0.468 C8 1QI 8 1QI C9 C9 C 0 1 Y N N N N N 133.738 -26.678 86.556 3.443 -1.515 0.403 C9 1QI 9 1QI C10 C10 C 0 1 Y N N N N N 133.190 -27.963 86.367 4.679 -1.295 0.982 C10 1QI 10 1QI C11 C11 C 0 1 Y N N N N N 131.962 -28.113 85.717 5.383 -0.142 0.689 C11 1QI 11 1QI C12 C12 C 0 1 Y N N N N N 131.271 -26.977 85.250 4.851 0.791 -0.182 C12 1QI 12 1QI C13 C13 C 0 1 Y N N N N N 131.811 -25.712 85.439 3.618 0.567 -0.765 C13 1QI 13 1QI C C14 C 0 1 N N N Y N Y 133.799 -23.236 84.009 0.622 1.264 -0.148 C14 1QI 14 1QI C34 C34 C 0 1 N N N N N N 136.602 -20.062 85.338 -4.462 0.088 0.523 C34 1QI 15 1QI C35 C35 C 0 1 N N N N N N 136.679 -18.604 85.794 -4.353 1.593 0.779 C35 1QI 16 1QI C36 C36 C 0 1 N N N N N N 137.482 -20.244 84.072 -5.835 -0.229 -0.074 C36 1QI 17 1QI N N1 N 0 1 N N N Y Y N 138.460 -20.810 86.665 -3.523 -1.771 -0.765 N1 1QI 18 1QI H1 H1 H 0 1 N N N N N N 134.207 -24.139 87.254 1.402 -1.895 -1.213 H1 1QI 19 1QI H3 H3 H 0 1 N N N Y N N 135.337 -24.457 84.945 0.560 -0.647 0.799 H3 1QI 20 1QI H4 H4 H 0 1 N N N Y N N 135.138 -21.659 84.881 -1.027 -0.098 -1.748 H4 1QI 21 1QI H5 H5 H 0 1 N N N Y N N 134.637 -22.055 86.560 -0.979 -1.666 -0.906 H5 1QI 22 1QI H6 H6 H 0 1 N N N Y N N 137.295 -22.809 85.280 -1.865 0.960 0.370 H6 1QI 23 1QI HA H7 H 0 1 N N N Y N N 136.520 -20.714 87.374 -3.452 0.238 -1.374 H7 1QI 24 1QI H8 H8 H 0 1 N N N N N N 137.706 -23.289 87.502 -2.011 -1.784 1.307 H8 1QI 25 1QI H9 H9 H 0 1 N N N N N N 134.685 -26.564 87.062 2.892 -2.416 0.631 H9 1QI 26 1QI H10 H10 H 0 1 N N N N N N 133.720 -28.833 86.725 5.094 -2.023 1.662 H10 1QI 27 1QI H11 H11 H 0 1 N N N N N N 131.543 -29.098 85.573 6.348 0.030 1.142 H11 1QI 28 1QI H12 H12 H 0 1 N N N N N N 130.323 -27.090 84.746 5.404 1.689 -0.413 H12 1QI 29 1QI H13 H13 H 0 1 N N N N N N 131.277 -24.842 85.087 3.203 1.296 -1.446 H13 1QI 30 1QI H15 H15 H 0 1 N N N N N N 135.560 -20.300 85.079 -4.342 -0.450 1.463 H15 1QI 31 1QI H16 H16 H 0 1 N N N N N N 136.058 -18.467 86.691 -4.473 2.131 -0.162 H16 1QI 32 1QI H17 H17 H 0 1 N N N N N N 137.723 -18.348 86.028 -5.132 1.900 1.476 H17 1QI 33 1QI H18 H18 H 0 1 N N N N N N 136.312 -17.949 84.990 -3.375 1.819 1.204 H18 1QI 34 1QI H19 H19 H 0 1 N N N N N N 137.432 -21.291 83.737 -6.615 0.161 0.580 H19 1QI 35 1QI H20 H20 H 0 1 N N N N N N 137.114 -19.585 83.272 -5.920 0.235 -1.057 H20 1QI 36 1QI H21 H21 H 0 1 N N N N N N 138.524 -19.985 84.310 -5.948 -1.309 -0.172 H21 1QI 37 1QI H2 H2 H 0 1 N Y N Y Y N 138.772 -21.416 87.397 -2.853 -2.066 -1.459 H2 1QI 38 1QI H H H 0 1 N N N Y Y N 138.953 -21.024 85.822 -3.450 -2.332 0.071 H 1QI 39 1QI OXT OXY O 0 1 N Y N Y N Y 133.881 -23.893 82.688 1.755 1.806 0.326 OXY 1QI 40 1QI HXT HXY H 0 1 N Y N Y N Y 133.323 -23.435 82.071 1.806 2.772 0.344 HXY 1QI 41 1QI H14 H14 H 0 1 N N N N N N 132.817 -23.424 86.368 1.530 -0.345 -2.078 H14 1QI 42 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 1QI C O DOUB N N 1 1QI C C2 SING N N 2 1QI C36 C34 SING N N 3 1QI C2 C3 SING N N 4 1QI C2 C1 SING N N 5 1QI C12 C13 DOUB Y N 6 1QI C12 C11 SING Y N 7 1QI C34 C35 SING N N 8 1QI C34 CA SING N N 9 1QI C13 C8 SING Y N 10 1QI C3 C4 SING N N 11 1QI C11 C10 DOUB Y N 12 1QI C8 C1 SING N N 13 1QI C8 C9 DOUB Y N 14 1QI C4 CA SING N N 15 1QI C4 O1 SING N N 16 1QI C10 C9 SING Y N 17 1QI CA N SING N N 18 1QI C1 H1 SING N N 19 1QI C2 H3 SING N N 20 1QI C3 H4 SING N N 21 1QI C3 H5 SING N N 22 1QI C4 H6 SING N N 23 1QI CA HA SING N N 24 1QI O1 H8 SING N N 25 1QI C9 H9 SING N N 26 1QI C10 H10 SING N N 27 1QI C11 H11 SING N N 28 1QI C12 H12 SING N N 29 1QI C13 H13 SING N N 30 1QI C34 H15 SING N N 31 1QI C35 H16 SING N N 32 1QI C35 H17 SING N N 33 1QI C35 H18 SING N N 34 1QI C36 H19 SING N N 35 1QI C36 H20 SING N N 36 1QI C36 H21 SING N N 37 1QI N H2 SING N N 38 1QI N H SING N N 39 1QI C OXT SING N N 40 1QI OXT HXT SING N N 41 1QI C1 H14 SING N N 42 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 1QI InChI InChI 1.03 "InChI=1S/C15H23NO3/c1-10(2)14(16)13(17)9-12(15(18)19)8-11-6-4-3-5-7-11/h3-7,10,12-14,17H,8-9,16H2,1-2H3,(H,18,19)/t12-,13+,14+/m1/s1" 1QI InChIKey InChI 1.03 NTLNICDVBOLIQC-RDBSUJKOSA-N 1QI SMILES_CANONICAL CACTVS 3.385 "CC(C)[C@H](N)[C@@H](O)C[C@@H](Cc1ccccc1)C(O)=O" 1QI SMILES CACTVS 3.385 "CC(C)[CH](N)[CH](O)C[CH](Cc1ccccc1)C(O)=O" 1QI SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC(C)[C@@H]([C@H](C[C@@H](Cc1ccccc1)C(=O)O)O)N" 1QI SMILES "OpenEye OEToolkits" 2.0.7 "CC(C)C(C(CC(Cc1ccccc1)C(=O)O)O)N" # _pdbx_chem_comp_identifier.comp_id 1QI _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(2~{R},4~{S},5~{S})-5-azanyl-6-methyl-4-oxidanyl-2-(phenylmethyl)heptanoic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 1QI "Create component" 2021-06-14 PDBE 1QI "Initial release" 2021-08-11 RCSB 1QI "Modify backbone" 2023-11-03 PDBE 1QI "Modify PCM" 2024-09-27 PDBE # _pdbx_chem_comp_pcm.pcm_id 1 _pdbx_chem_comp_pcm.comp_id 1QI _pdbx_chem_comp_pcm.modified_residue_id ? _pdbx_chem_comp_pcm.type None _pdbx_chem_comp_pcm.category "Non-standard residue" _pdbx_chem_comp_pcm.position "Amino-acid side chain and backbone" _pdbx_chem_comp_pcm.polypeptide_position "Any position" _pdbx_chem_comp_pcm.comp_id_linking_atom ? _pdbx_chem_comp_pcm.modified_residue_id_linking_atom ? _pdbx_chem_comp_pcm.uniprot_specific_ptm_accession ? _pdbx_chem_comp_pcm.uniprot_generic_ptm_accession ? #