data_1RT # _chem_comp.id 1RT _chem_comp.name "4-amino-2-oxo-1,2-dihydropyrimidine-5-carboxylic acid" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C5 H5 N3 O3" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2013-05-10 _chem_comp.pdbx_modified_date 2013-05-24 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 155.111 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 1RT _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 4JGC _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 1RT N1 N1 N 0 1 N N N 347.251 -70.237 434.097 1.596 -1.299 -0.022 N1 1XX 1 1RT C2 C2 C 0 1 N N N 346.261 -71.230 434.027 2.167 -0.084 -0.004 C2 1XX 2 1RT O2 O2 O 0 1 N N N 346.565 -72.417 434.320 3.384 -0.007 -0.005 O2 1XX 3 1RT N3 N3 N 0 1 N N N 345.004 -70.898 433.637 1.452 1.038 0.015 N3 1XX 4 1RT C4 C4 C 0 1 N N N 344.675 -69.626 433.323 0.126 1.000 0.017 C4 1XX 5 1RT N4 N4 N 0 1 N N N 343.400 -69.375 432.938 -0.607 2.158 0.042 N4 1XX 6 1RT C5 C5 C 0 1 N N N 345.637 -68.629 433.400 -0.540 -0.308 -0.002 C5 1XX 7 1RT C6 C6 C 0 1 N N N 346.928 -68.968 433.802 0.254 -1.441 -0.027 C6 1XX 8 1RT C21 C21 C 0 1 N N N 345.326 -67.199 433.037 -2.007 -0.411 -0.001 C21 1XX 9 1RT O22 O22 O 0 1 N N N 344.127 -66.845 432.841 -2.540 -1.500 0.083 O22 1XX 10 1RT O23 O23 O 0 1 N N N 346.309 -66.410 432.905 -2.761 0.703 -0.092 O23 1XX 11 1RT H1 H1 H 0 1 N N N 342.735 -70.121 432.893 -1.574 2.122 -0.031 H1 1XX 12 1RT H2 H2 H 0 1 N N N 343.124 -68.444 432.699 -0.159 3.014 0.132 H2 1XX 13 1RT H4 H4 H 0 1 N N N 347.681 -68.197 433.877 -0.193 -2.424 -0.041 H4 1XX 14 1RT H5 H5 H 0 1 N N N 345.994 -65.552 432.646 -3.721 0.585 -0.087 H5 1XX 15 1RT H6 H6 H 0 1 N N N 348.186 -70.472 434.363 2.158 -2.089 -0.036 H6 1XX 16 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 1RT O22 C21 DOUB N N 1 1RT O23 C21 SING N N 2 1RT N4 C4 SING N N 3 1RT C21 C5 SING N N 4 1RT C4 C5 SING N N 5 1RT C4 N3 DOUB N N 6 1RT C5 C6 DOUB N N 7 1RT N3 C2 SING N N 8 1RT C6 N1 SING N N 9 1RT C2 N1 SING N N 10 1RT C2 O2 DOUB N N 11 1RT N4 H1 SING N N 12 1RT N4 H2 SING N N 13 1RT C6 H4 SING N N 14 1RT O23 H5 SING N N 15 1RT N1 H6 SING N N 16 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 1RT SMILES ACDLabs 12.01 "O=C1N=C(N)C(C(=O)O)=CN1" 1RT InChI InChI 1.03 "InChI=1S/C5H5N3O3/c6-3-2(4(9)10)1-7-5(11)8-3/h1H,(H,9,10)(H3,6,7,8,11)" 1RT InChIKey InChI 1.03 BLQMCTXZEMGOJM-UHFFFAOYSA-N 1RT SMILES_CANONICAL CACTVS 3.370 "NC1=NC(=O)NC=C1C(O)=O" 1RT SMILES CACTVS 3.370 "NC1=NC(=O)NC=C1C(O)=O" 1RT SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "C1=C(C(=NC(=O)N1)N)C(=O)O" 1RT SMILES "OpenEye OEToolkits" 1.7.6 "C1=C(C(=NC(=O)N1)N)C(=O)O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 1RT "SYSTEMATIC NAME" ACDLabs 12.01 "4-amino-2-oxo-1,2-dihydropyrimidine-5-carboxylic acid" 1RT "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "4-azanyl-2-oxidanylidene-1H-pyrimidine-5-carboxylic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 1RT "Create component" 2013-05-10 RCSB 1RT "Initial release" 2013-05-29 RCSB #