data_1YN # _chem_comp.id 1YN _chem_comp.name "2-[(2R)-butan-2-yl]-4-{4-[4-(4-{[(2R,4S)-2-(2,4-dichlorophenyl)-2-(1H-1,2,4-triazol-1-ylmethyl)-1,3-dioxolan-4-yl]methoxy}phenyl)piperazin-1-yl]phenyl}-2,4-dihydro-3H-1,2,4-triazol-3-one" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C35 H38 Cl2 N8 O4" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms Itraconazole _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2013-08-05 _chem_comp.pdbx_modified_date 2021-03-01 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 705.633 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 1YN _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 4K0F _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 1YN C12 C12 C 0 1 Y N N 9.738 13.322 19.856 8.011 -1.453 -0.771 C12 1YN 1 1YN C11 C11 C 0 1 Y N N 8.896 12.273 20.271 8.787 -0.500 -0.125 C11 1YN 2 1YN C01 C01 C 0 1 N N N 4.419 15.125 17.693 13.589 -0.831 2.696 C01 1YN 3 1YN C02 C02 C 0 1 N N N 3.711 14.475 18.897 14.353 -0.528 1.406 C02 1YN 4 1YN C03 C03 C 0 1 N N R 4.430 14.489 20.219 13.551 0.463 0.559 C03 1YN 5 1YN C04 C04 C 0 1 N N N 3.484 14.308 21.328 14.370 0.862 -0.670 C04 1YN 6 1YN N05 N05 N 0 1 N N N 5.475 13.477 20.222 12.299 -0.163 0.130 N05 1YN 7 1YN C06 C06 C 0 1 N N N 6.764 13.718 20.412 11.051 0.270 0.409 C06 1YN 8 1YN O07 O07 O 0 1 N N N 7.270 14.829 20.303 10.760 1.253 1.066 O07 1YN 9 1YN N08 N08 N 0 1 N N N 7.455 12.482 20.392 10.188 -0.587 -0.172 N08 1YN 10 1YN C09 C09 C 0 1 N N N 6.492 11.531 20.196 10.913 -1.560 -0.819 C09 1YN 11 1YN N10 N10 N 0 1 N N N 5.286 12.152 20.143 12.174 -1.319 -0.653 N10 1YN 12 1YN C13 C13 C 0 1 Y N N 11.117 13.204 19.936 6.634 -1.368 -0.725 C13 1YN 13 1YN C14 C14 C 0 1 Y N N 11.695 11.966 20.369 6.025 -0.329 -0.032 C14 1YN 14 1YN C15 C15 C 0 1 Y N N 10.874 11.086 21.086 6.802 0.624 0.614 C15 1YN 15 1YN C16 C16 C 0 1 Y N N 9.486 11.104 20.839 8.179 0.539 0.567 C16 1YN 16 1YN N17 N17 N 0 1 N N N 13.183 11.790 20.410 4.630 -0.243 0.014 N17 1YN 17 1YN C18 C18 C 0 1 N N N 13.366 10.540 19.694 4.201 0.926 0.795 C18 1YN 18 1YN C19 C19 C 0 1 N N N 14.803 10.056 19.828 2.673 0.940 0.889 C19 1YN 19 1YN N20 N20 N 0 1 N N N 15.792 11.075 19.547 2.102 0.976 -0.465 N20 1YN 20 1YN C21 C21 C 0 1 N N N 15.520 12.372 20.141 2.532 -0.192 -1.246 C21 1YN 21 1YN C22 C22 C 0 1 N N N 14.087 12.806 19.960 4.059 -0.206 -1.339 C22 1YN 22 1YN C23 C23 C 0 1 Y N N 16.948 10.709 18.722 0.706 1.063 -0.418 C23 1YN 23 1YN C24 C24 C 0 1 Y N N 17.607 11.746 17.982 0.053 1.109 0.807 C24 1YN 24 1YN C25 C25 C 0 1 Y N N 18.718 11.450 17.212 -1.324 1.200 0.852 C25 1YN 25 1YN C26 C26 C 0 1 Y N N 19.417 10.261 17.433 -2.055 1.246 -0.326 C26 1YN 26 1YN C27 C27 C 0 1 Y N N 18.858 9.272 18.311 -1.404 1.200 -1.550 C27 1YN 27 1YN C28 C28 C 0 1 Y N N 17.644 9.517 18.954 -0.027 1.109 -1.597 C28 1YN 28 1YN O29 O29 O 0 1 N N N 20.692 10.104 16.815 -3.411 1.336 -0.281 O29 1YN 29 1YN C30 C30 C 0 1 N N N 21.484 8.945 16.958 -4.101 1.379 -1.532 C30 1YN 30 1YN C31 C31 C 0 1 N N S 22.510 8.779 15.931 -5.607 1.479 -1.281 C31 1YN 31 1YN C32 C32 C 0 1 N N N 21.952 9.303 14.685 -6.383 1.531 -2.621 C32 1YN 32 1YN O33 O33 O 0 1 N N N 22.330 10.627 14.645 -7.671 0.993 -2.236 O33 1YN 33 1YN C34 C34 C 0 1 N N R 23.458 10.764 15.456 -7.369 -0.024 -1.265 C34 1YN 34 1YN O35 O35 O 0 1 N N N 23.594 9.580 16.197 -6.102 0.274 -0.663 O35 1YN 35 1YN C36 C36 C 0 1 N N N 23.425 11.945 16.446 -7.304 -1.389 -1.952 C36 1YN 36 1YN N37 N37 N 0 1 Y N N 24.743 12.165 17.006 -6.929 -2.412 -0.973 N37 1YN 37 1YN C38 C38 C 0 1 Y N N 25.412 11.304 17.759 -7.592 -3.549 -0.702 C38 1YN 38 1YN N39 N39 N 0 1 Y N N 26.580 11.922 18.173 -6.936 -4.190 0.231 N39 1YN 39 1YN C40 C40 C 0 1 Y N N 26.568 13.183 17.634 -5.853 -3.496 0.579 C40 1YN 40 1YN N41 N41 N 0 1 Y N N 25.386 13.346 17.040 -5.803 -2.402 -0.134 N41 1YN 41 1YN C42 C42 C 0 1 Y N N 24.584 10.928 14.507 -8.440 -0.045 -0.205 C42 1YN 42 1YN C43 C43 C 0 1 Y N N 24.568 11.959 13.598 -8.605 1.043 0.633 C43 1YN 43 1YN C44 C44 C 0 1 Y N N 25.653 12.103 12.692 -9.588 1.024 1.607 C44 1YN 44 1YN C45 C45 C 0 1 Y N N 26.567 11.046 12.524 -10.406 -0.084 1.741 C45 1YN 45 1YN C46 C46 C 0 1 Y N N 26.474 9.930 13.331 -10.240 -1.172 0.902 C46 1YN 46 1YN C47 C47 C 0 1 Y N N 25.433 9.823 14.265 -9.261 -1.149 -0.074 C47 1YN 47 1YN CL8 CL8 CL 0 0 N N N 27.831 11.116 11.383 -11.639 -0.109 2.962 CL8 1YN 48 1YN CL9 CL9 CL 0 0 N N N 23.351 13.152 13.633 -7.578 2.433 0.465 CL9 1YN 49 1YN H1 H1 H 0 1 N N N 9.303 14.232 19.470 8.484 -2.258 -1.313 H1 1YN 50 1YN H2 H2 H 0 1 N N N 3.780 15.040 16.802 13.443 0.091 3.257 H2 1YN 51 1YN H3 H3 H 0 1 N N N 4.609 16.187 17.909 12.619 -1.264 2.451 H3 1YN 52 1YN H4 H4 H 0 1 N N N 5.374 14.612 17.509 14.160 -1.537 3.299 H4 1YN 53 1YN H5 H5 H 0 1 N N N 2.754 14.998 19.038 15.323 -0.095 1.651 H5 1YN 54 1YN H6 H6 H 0 1 N N N 3.520 13.423 18.638 14.498 -1.451 0.844 H6 1YN 55 1YN H7 H7 H 0 1 N N N 4.904 15.475 20.331 13.329 1.351 1.152 H7 1YN 56 1YN H8 H8 H 0 1 N N N 4.030 14.321 22.283 13.799 1.568 -1.273 H8 1YN 57 1YN H9 H9 H 0 1 N N N 2.746 15.123 21.317 15.302 1.328 -0.351 H9 1YN 58 1YN H10 H10 H 0 1 N N N 2.967 13.344 21.215 14.592 -0.025 -1.263 H10 1YN 59 1YN H11 H11 H 0 1 N N N 6.662 10.469 20.100 10.498 -2.386 -1.376 H11 1YN 60 1YN H12 H12 H 0 1 N N N 11.751 14.038 19.674 6.030 -2.109 -1.227 H12 1YN 61 1YN H13 H13 H 0 1 N N N 11.296 10.408 21.813 6.329 1.432 1.152 H13 1YN 62 1YN H14 H14 H 0 1 N N N 8.877 10.244 21.077 8.783 1.280 1.069 H14 1YN 63 1YN H15 H15 H 0 1 N N N 13.134 10.695 18.630 4.626 0.870 1.797 H15 1YN 64 1YN H16 H16 H 0 1 N N N 12.688 9.781 20.111 4.543 1.837 0.305 H16 1YN 65 1YN H17 H17 H 0 1 N N N 14.955 9.223 19.126 2.332 0.042 1.404 H17 1YN 66 1YN H18 H18 H 0 1 N N N 14.954 9.701 20.858 2.351 1.822 1.444 H18 1YN 67 1YN H19 H19 H 0 1 N N N 15.738 12.319 21.218 2.189 -1.103 -0.755 H19 1YN 68 1YN H20 H20 H 0 1 N N N 16.176 13.119 19.671 2.106 -0.136 -2.248 H20 1YN 69 1YN H21 H21 H 0 1 N N N 13.913 13.725 20.540 4.400 0.692 -1.854 H21 1YN 70 1YN H22 H22 H 0 1 N N N 13.903 13.005 18.894 4.381 -1.088 -1.893 H22 1YN 71 1YN H23 H23 H 0 1 N N N 17.236 12.759 18.026 0.623 1.072 1.724 H23 1YN 72 1YN H24 H24 H 0 1 N N N 19.043 12.135 16.443 -1.832 1.235 1.804 H24 1YN 73 1YN H25 H25 H 0 1 N N N 19.377 8.339 18.474 -1.974 1.235 -2.466 H25 1YN 74 1YN H26 H26 H 0 1 N N N 17.239 8.783 19.635 0.480 1.078 -2.550 H26 1YN 75 1YN H27 H27 H 0 1 N N N 20.820 8.069 16.924 -3.769 2.248 -2.100 H27 1YN 76 1YN H28 H28 H 0 1 N N N 21.983 8.989 17.937 -3.886 0.472 -2.096 H28 1YN 77 1YN H29 H29 H 0 1 N N N 22.789 7.721 15.822 -5.837 2.349 -0.666 H29 1YN 78 1YN H30 H30 H 0 1 N N N 20.855 9.215 14.687 -6.479 2.556 -2.977 H30 1YN 79 1YN H31 H31 H 0 1 N N N 22.362 8.759 13.821 -5.905 0.902 -3.373 H31 1YN 80 1YN H32 H32 H 0 1 N N N 23.098 12.853 15.918 -8.279 -1.630 -2.374 H32 1YN 81 1YN H33 H33 H 0 1 N N N 22.718 11.719 17.258 -6.561 -1.359 -2.749 H33 1YN 82 1YN H34 H34 H 0 1 N N N 25.102 10.299 18.006 -8.508 -3.877 -1.172 H34 1YN 83 1YN H35 H35 H 0 1 N N N 27.367 13.908 17.682 -5.131 -3.792 1.326 H35 1YN 84 1YN H36 H36 H 0 1 N N N 25.776 13.020 12.135 -9.717 1.873 2.261 H36 1YN 85 1YN H37 H37 H 0 1 N N N 27.203 9.138 13.243 -10.877 -2.037 1.007 H37 1YN 86 1YN H38 H38 H 0 1 N N N 25.280 8.897 14.799 -9.132 -1.998 -0.728 H38 1YN 87 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 1YN CL8 C45 SING N N 1 1YN C45 C44 DOUB Y N 2 1YN C45 C46 SING Y N 3 1YN C44 C43 SING Y N 4 1YN C46 C47 DOUB Y N 5 1YN C43 CL9 SING N N 6 1YN C43 C42 DOUB Y N 7 1YN C47 C42 SING Y N 8 1YN C42 C34 SING N N 9 1YN O33 C32 SING N N 10 1YN O33 C34 SING N N 11 1YN C32 C31 SING N N 12 1YN C34 O35 SING N N 13 1YN C34 C36 SING N N 14 1YN C31 O35 SING N N 15 1YN C31 C30 SING N N 16 1YN C36 N37 SING N N 17 1YN O29 C30 SING N N 18 1YN O29 C26 SING N N 19 1YN N37 N41 SING Y N 20 1YN N37 C38 SING Y N 21 1YN N41 C40 DOUB Y N 22 1YN C25 C26 DOUB Y N 23 1YN C25 C24 SING Y N 24 1YN C26 C27 SING Y N 25 1YN C40 N39 SING Y N 26 1YN C01 C02 SING N N 27 1YN C38 N39 DOUB Y N 28 1YN C24 C23 DOUB Y N 29 1YN C27 C28 DOUB Y N 30 1YN C23 C28 SING Y N 31 1YN C23 N20 SING N N 32 1YN C02 C03 SING N N 33 1YN N20 C19 SING N N 34 1YN N20 C21 SING N N 35 1YN C18 C19 SING N N 36 1YN C18 N17 SING N N 37 1YN C12 C13 DOUB Y N 38 1YN C12 C11 SING Y N 39 1YN C13 C14 SING Y N 40 1YN C22 C21 SING N N 41 1YN C22 N17 SING N N 42 1YN N10 C09 DOUB N N 43 1YN N10 N05 SING N N 44 1YN C09 N08 SING N N 45 1YN C03 N05 SING N N 46 1YN C03 C04 SING N N 47 1YN N05 C06 SING N N 48 1YN C11 N08 SING N N 49 1YN C11 C16 DOUB Y N 50 1YN O07 C06 DOUB N N 51 1YN C14 N17 SING N N 52 1YN C14 C15 DOUB Y N 53 1YN N08 C06 SING N N 54 1YN C16 C15 SING Y N 55 1YN C12 H1 SING N N 56 1YN C01 H2 SING N N 57 1YN C01 H3 SING N N 58 1YN C01 H4 SING N N 59 1YN C02 H5 SING N N 60 1YN C02 H6 SING N N 61 1YN C03 H7 SING N N 62 1YN C04 H8 SING N N 63 1YN C04 H9 SING N N 64 1YN C04 H10 SING N N 65 1YN C09 H11 SING N N 66 1YN C13 H12 SING N N 67 1YN C15 H13 SING N N 68 1YN C16 H14 SING N N 69 1YN C18 H15 SING N N 70 1YN C18 H16 SING N N 71 1YN C19 H17 SING N N 72 1YN C19 H18 SING N N 73 1YN C21 H19 SING N N 74 1YN C21 H20 SING N N 75 1YN C22 H21 SING N N 76 1YN C22 H22 SING N N 77 1YN C24 H23 SING N N 78 1YN C25 H24 SING N N 79 1YN C27 H25 SING N N 80 1YN C28 H26 SING N N 81 1YN C30 H27 SING N N 82 1YN C30 H28 SING N N 83 1YN C31 H29 SING N N 84 1YN C32 H30 SING N N 85 1YN C32 H31 SING N N 86 1YN C36 H32 SING N N 87 1YN C36 H33 SING N N 88 1YN C38 H34 SING N N 89 1YN C40 H35 SING N N 90 1YN C44 H36 SING N N 91 1YN C46 H37 SING N N 92 1YN C47 H38 SING N N 93 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 1YN SMILES ACDLabs 12.01 "O=C1N(N=CN1c2ccc(cc2)N7CCN(c6ccc(OCC3OC(OC3)(c4ccc(Cl)cc4Cl)Cn5ncnc5)cc6)CC7)C(C)CC" 1YN InChI InChI 1.03 "InChI=1S/C35H38Cl2N8O4/c1-3-25(2)45-34(46)44(24-40-45)29-7-5-27(6-8-29)41-14-16-42(17-15-41)28-9-11-30(12-10-28)47-19-31-20-48-35(49-31,21-43-23-38-22-39-43)32-13-4-26(36)18-33(32)37/h4-13,18,22-25,31H,3,14-17,19-21H2,1-2H3/t25-,31+,35+/m1/s1" 1YN InChIKey InChI 1.03 VHVPQPYKVGDNFY-DFMJLFEVSA-N 1YN SMILES_CANONICAL CACTVS 3.385 "CC[C@@H](C)N1N=CN(C1=O)c2ccc(cc2)N3CCN(CC3)c4ccc(OC[C@H]5CO[C@@](Cn6cncn6)(O5)c7ccc(Cl)cc7Cl)cc4" 1YN SMILES CACTVS 3.385 "CC[CH](C)N1N=CN(C1=O)c2ccc(cc2)N3CCN(CC3)c4ccc(OC[CH]5CO[C](Cn6cncn6)(O5)c7ccc(Cl)cc7Cl)cc4" 1YN SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "CC[C@@H](C)N1C(=O)N(C=N1)c2ccc(cc2)N3CCN(CC3)c4ccc(cc4)OC[C@H]5CO[C@](O5)(Cn6cncn6)c7ccc(cc7Cl)Cl" 1YN SMILES "OpenEye OEToolkits" 1.7.6 "CCC(C)N1C(=O)N(C=N1)c2ccc(cc2)N3CCN(CC3)c4ccc(cc4)OCC5COC(O5)(Cn6cncn6)c7ccc(cc7Cl)Cl" # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 1YN "SYSTEMATIC NAME" ACDLabs 12.01 "2-[(2R)-butan-2-yl]-4-{4-[4-(4-{[(2R,4S)-2-(2,4-dichlorophenyl)-2-(1H-1,2,4-triazol-1-ylmethyl)-1,3-dioxolan-4-yl]methoxy}phenyl)piperazin-1-yl]phenyl}-2,4-dihydro-3H-1,2,4-triazol-3-one" 1YN "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "2-[(2R)-butan-2-yl]-4-[4-[4-[4-[[(2R,4S)-2-(2,4-dichlorophenyl)-2-(1,2,4-triazol-1-ylmethyl)-1,3-dioxolan-4-yl]methoxy]phenyl]piperazin-1-yl]phenyl]-1,2,4-triazol-3-one" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 1YN "Create component" 2013-08-05 RCSB 1YN "Initial release" 2014-01-29 RCSB 1YN "Modify synonyms" 2021-03-01 PDBE # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id 1YN _pdbx_chem_comp_synonyms.name Itraconazole _pdbx_chem_comp_synonyms.provenance ? _pdbx_chem_comp_synonyms.type ? ##