data_233
#
_chem_comp.id 233
_chem_comp.name "[5-(3,4,5-TRIHYDROXY-6-HYDROXYMETHYL-TETRAHYDRO-PYRAN-2-YLCARBAMOYL)-PENTYL]-CARBAMIC ACID METHYL ESTER"
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C14 H26 N2 O8"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms BMSC-0013
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2002-08-13
_chem_comp.pdbx_modified_date 2020-06-17
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 350.365
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code 233
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details ?
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 1MD2
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
# #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
233 C1 C1 C 0 1 N N R -11.105 19.645 2.352 0.359 0.160 -3.162 C1 233 1
233 C2 C2 C 0 1 N N R -10.906 18.397 3.222 1.461 -0.061 -4.201 C2 233 2
233 C3 C3 C 0 1 N N S -11.363 18.733 4.652 1.063 0.633 -5.508 C3 233 3
233 C4 C4 C 0 1 N N R -10.614 20.000 5.172 -0.328 0.140 -5.919 C4 233 4
233 C5 C5 C 0 1 N N R -10.764 21.139 4.167 -1.295 0.345 -4.751 C5 233 5
233 C6 C6 C 0 1 N N N -9.963 22.409 4.487 -2.695 -0.113 -5.165 C6 233 6
233 O2 O2 O 0 1 N N N -11.739 17.352 2.687 2.689 0.491 -3.720 O2 233 7
233 O3 O3 O 0 1 N N N -11.015 17.640 5.489 2.007 0.314 -6.531 O3 233 8
233 O4 O4 O 0 1 N N N -9.208 19.677 5.295 -0.266 -1.248 -6.251 O4 233 9
233 O5 O5 O 0 1 N N N -10.357 20.751 2.841 -0.861 -0.414 -3.625 O5 233 10
233 O6 O6 O 0 1 N N N -10.348 23.488 3.644 -3.602 0.083 -4.078 O6 233 11
233 N1 N1 N 0 1 N N N -10.847 19.291 0.981 0.746 -0.471 -1.899 N1 233 12
233 O7 O7 O 0 1 N N N -12.241 20.827 0.141 -0.385 1.030 -0.722 O7 233 13
233 C7 C7 C 0 1 N N N -11.479 19.866 -0.026 0.319 0.043 -0.729 C7 233 14
233 C8 C8 C 0 1 N N N -11.189 19.263 -1.388 0.718 -0.607 0.570 C8 233 15
233 C9 C9 C 0 1 N N N -12.212 18.137 -1.656 0.104 0.168 1.738 C9 233 16
233 C10 C10 C 0 1 N N N -13.635 18.478 -1.215 0.509 -0.491 3.057 C10 233 17
233 C11 C11 C 0 1 N N N -14.663 17.669 -1.973 -0.104 0.284 4.225 C11 233 18
233 C12 C12 C 0 1 N N N -15.577 16.824 -1.071 0.300 -0.375 5.544 C12 233 19
233 N13 N13 N 0 1 N N N -15.656 15.466 -1.608 -0.287 0.367 6.662 N13 233 20
233 C14 C14 C 0 1 N N N -16.352 15.013 -2.629 -0.064 -0.034 7.929 C14 233 21
233 O15 O15 O 0 1 N N N -16.122 13.606 -2.946 0.623 -1.012 8.145 O15 233 22
233 O16 O16 O 0 1 N N N -17.331 15.773 -3.375 -0.604 0.648 8.957 O16 233 23
233 C17 C17 C 0 1 N N N -16.904 16.855 -4.203 -0.364 0.215 10.322 C17 233 24
233 H1 H1 H 0 1 N N N -12.160 20.000 2.404 0.220 1.229 -3.004 H1 233 25
233 H2 H2 H 0 1 N N N -9.839 18.072 3.231 1.587 -1.129 -4.379 H2 233 26
233 H3 H3 H 0 1 N N N -12.461 18.922 4.659 1.039 1.713 -5.356 H3 233 27
233 H4 H4 H 0 1 N N N -11.039 20.312 6.154 -0.675 0.707 -6.784 H4 233 28
233 H5 H5 H 0 1 N N N -11.853 21.366 4.231 -1.324 1.402 -4.486 H5 233 29
233 H9 H9 H 0 1 N N N -10.043 22.682 5.564 -3.028 0.466 -6.026 H9 233 30
233 H10 H10 H 0 1 N N N -8.864 22.223 4.438 -2.667 -1.171 -5.428 H10 233 31
233 H6 H6 H 0 1 N N N -11.615 16.579 3.225 2.902 0.026 -2.899 H6 233 32
233 H7 H7 H 0 1 N N N -11.297 17.847 6.372 2.866 0.641 -6.231 H7 233 33
233 H8 H8 H 0 1 N N N -8.752 20.448 5.611 0.352 -1.331 -6.989 H8 233 34
233 H11 H11 H 0 1 N N N -9.852 24.273 3.842 -4.469 -0.218 -4.380 H11 233 35
233 H12 H12 H 0 1 N N N -10.168 18.582 0.703 1.310 -1.261 -1.904 H12 233 36
233 H13 H13 H 0 1 N N N -11.172 20.027 -2.199 1.804 -0.601 0.661 H13 233 37
233 H14 H14 H 0 1 N N N -10.134 18.914 -1.485 0.357 -1.635 0.588 H14 233 38
233 H15 H15 H 0 1 N N N -12.194 17.838 -2.730 -0.981 0.163 1.647 H15 233 39
233 H16 H16 H 0 1 N N N -11.875 17.181 -1.190 0.465 1.197 1.720 H16 233 40
233 H17 H17 H 0 1 N N N -13.758 18.362 -0.112 1.595 -0.486 3.148 H17 233 41
233 H18 H18 H 0 1 N N N -13.835 19.571 -1.298 0.148 -1.519 3.075 H18 233 42
233 H19 H19 H 0 1 N N N -15.268 18.328 -2.638 -1.190 0.279 4.134 H19 233 43
233 H20 H20 H 0 1 N N N -14.170 17.029 -2.741 0.256 1.312 4.207 H20 233 44
233 H21 H21 H 0 1 N N N -15.252 16.839 -0.004 1.386 -0.370 5.635 H21 233 45
233 H22 H22 H 0 1 N N N -16.582 17.285 -0.935 -0.060 -1.403 5.562 H22 233 46
233 H23 H23 H 0 1 N N N -15.130 14.695 -1.195 -0.836 1.148 6.490 H23 233 47
233 H24 H24 H 0 1 N N N -17.658 17.440 -4.778 -0.878 0.885 11.011 H24 233 48
233 H25 H25 H 0 1 N N N -16.304 17.561 -3.582 -0.741 -0.798 10.453 H25 233 49
233 H26 H26 H 0 1 N N N -16.133 16.475 -4.913 0.706 0.234 10.526 H26 233 50
# #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
233 C1 C2 SING N N 1
233 C1 O5 SING N N 2
233 C1 N1 SING N N 3
233 C1 H1 SING N N 4
233 C2 C3 SING N N 5
233 C2 O2 SING N N 6
233 C2 H2 SING N N 7
233 C3 C4 SING N N 8
233 C3 O3 SING N N 9
233 C3 H3 SING N N 10
233 C4 C5 SING N N 11
233 C4 O4 SING N N 12
233 C4 H4 SING N N 13
233 C5 C6 SING N N 14
233 C5 O5 SING N N 15
233 C5 H5 SING N N 16
233 C6 O6 SING N N 17
233 C6 H9 SING N N 18
233 C6 H10 SING N N 19
233 O2 H6 SING N N 20
233 O3 H7 SING N N 21
233 O4 H8 SING N N 22
233 O6 H11 SING N N 23
233 N1 C7 SING N N 24
233 N1 H12 SING N N 25
233 O7 C7 DOUB N N 26
233 C7 C8 SING N N 27
233 C8 C9 SING N N 28
233 C8 H13 SING N N 29
233 C8 H14 SING N N 30
233 C9 C10 SING N N 31
233 C9 H15 SING N N 32
233 C9 H16 SING N N 33
233 C10 C11 SING N N 34
233 C10 H17 SING N N 35
233 C10 H18 SING N N 36
233 C11 C12 SING N N 37
233 C11 H19 SING N N 38
233 C11 H20 SING N N 39
233 C12 N13 SING N N 40
233 C12 H21 SING N N 41
233 C12 H22 SING N N 42
233 N13 C14 SING N N 43
233 N13 H23 SING N N 44
233 C14 O15 DOUB N N 45
233 C14 O16 SING N N 46
233 O16 C17 SING N N 47
233 C17 H24 SING N N 48
233 C17 H25 SING N N 49
233 C17 H26 SING N N 50
# #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
233 SMILES ACDLabs 10.04 "O=C(NC1OC(C(O)C(O)C1O)CO)CCCCCNC(=O)OC"
233 SMILES_CANONICAL CACTVS 3.341 "COC(=O)NCCCCCC(=O)N[C@@H]1O[C@H](CO)[C@H](O)[C@H](O)[C@H]1O"
233 SMILES CACTVS 3.341 "COC(=O)NCCCCCC(=O)N[CH]1O[CH](CO)[CH](O)[CH](O)[CH]1O"
233 SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "COC(=O)NCCCCCC(=O)N[C@H]1[C@@H]([C@H]([C@H]([C@H](O1)CO)O)O)O"
233 SMILES "OpenEye OEToolkits" 1.5.0 "COC(=O)NCCCCCC(=O)NC1C(C(C(C(O1)CO)O)O)O"
233 InChI InChI 1.03 "InChI=1S/C14H26N2O8/c1-23-14(22)15-6-4-2-3-5-9(18)16-13-12(21)11(20)10(19)8(7-17)24-13/h8,10-13,17,19-21H,2-7H2,1H3,(H,15,22)(H,16,18)/t8-,10+,11+,12-,13-/m1/s1"
233 InChIKey InChI 1.03 YTYAKGJMNHDUDF-UUWLPUTASA-N
# #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
233 "SYSTEMATIC NAME" ACDLabs 10.04 "N-{6-[(methoxycarbonyl)amino]hexanoyl}-beta-D-galactopyranosylamine"
233 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "methyl N-[6-oxo-6-[[(2R,3R,4S,5R,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]amino]hexyl]carbamate"
# #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
233 "Create component" 2002-08-13 RCSB
233 "Modify descriptor" 2011-06-04 RCSB
233 "Modify synonyms" 2020-06-05 PDBE
#
_pdbx_chem_comp_synonyms.ordinal 1
_pdbx_chem_comp_synonyms.comp_id 233
_pdbx_chem_comp_synonyms.name BMSC-0013
_pdbx_chem_comp_synonyms.provenance ?
_pdbx_chem_comp_synonyms.type ?
##