data_239 # _chem_comp.id 239 _chem_comp.name "6-[(Z)-AMINO(IMINO)METHYL]-N-[4-(AMINOMETHYL)PHENYL]-2-NAPHTHAMIDE" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C19 H18 N4 O" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "6-[N-(4-(AMINOMETHYL)PHENYL)CARBAMYL]-2-NAPHTHALENECARBOXAMIDINE" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2003-04-09 _chem_comp.pdbx_modified_date 2020-06-17 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 318.372 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 239 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details ? _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 1OWH _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 239 N18 N18 N 0 1 N N N 17.026 19.534 33.817 -1.353 0.120 -7.190 N18 239 1 239 C17 C17 C 0 1 N N N 18.342 19.779 34.021 -0.129 0.013 -6.758 C17 239 2 239 N19 N19 N 0 1 N N N 18.899 20.944 34.416 0.912 -0.068 -7.656 N19 239 3 239 C12 C12 C 0 1 Y N N 19.240 18.684 33.674 0.142 -0.019 -5.303 C12 239 4 239 C13 C13 C 0 1 Y N N 20.563 18.536 34.195 -0.908 0.063 -4.407 C13 239 5 239 C3 C3 C 0 1 Y N N 21.475 17.539 33.839 -0.646 0.031 -3.029 C3 239 6 239 C4 C4 C 0 1 Y N N 22.692 17.462 34.520 -1.693 0.114 -2.092 C4 239 7 239 C5 C5 C 0 1 Y N N 23.510 16.380 34.139 -1.419 0.081 -0.763 C5 239 8 239 C6 C6 C 0 1 Y N N 23.301 15.431 33.117 -0.095 -0.035 -0.302 C6 239 9 239 C1 C1 C 0 1 Y N N 22.028 15.590 32.547 0.956 -0.113 -1.199 C1 239 10 239 C2 C2 C 0 1 Y N N 21.074 16.588 32.863 0.693 -0.086 -2.577 C2 239 11 239 C10 C10 C 0 1 Y N N 19.807 16.578 32.268 1.739 -0.169 -3.514 C10 239 12 239 C11 C11 C 0 1 Y N N 18.944 17.615 32.692 1.465 -0.135 -4.844 C11 239 13 239 C23 C23 C 0 1 N N N 24.306 14.477 32.678 0.174 -0.069 1.149 C23 239 14 239 O35 O35 O 0 1 N N N 25.100 14.103 33.550 1.317 -0.170 1.553 O35 239 15 239 N24 N24 N 0 1 N N N 24.448 14.164 31.364 -0.844 0.010 2.027 N24 239 16 239 C25 C25 C 0 1 Y N N 25.386 13.327 30.730 -0.582 0.094 3.398 C25 239 17 239 C30 C30 C 0 1 Y N N 25.977 12.239 31.415 -1.452 -0.488 4.310 C30 239 18 239 C29 C29 C 0 1 Y N N 26.942 11.473 30.723 -1.190 -0.403 5.663 C29 239 19 239 C28 C28 C 0 1 Y N N 27.199 11.781 29.363 -0.063 0.261 6.111 C28 239 20 239 C27 C27 C 0 1 Y N N 26.555 12.822 28.663 0.801 0.847 5.206 C27 239 21 239 C26 C26 C 0 1 Y N N 25.709 13.660 29.411 0.548 0.761 3.851 C26 239 22 239 C37 C37 C 0 1 N N N 28.261 10.974 28.654 0.218 0.352 7.588 C37 239 23 239 N38 N38 N 0 1 N N N 29.608 11.426 28.955 1.032 -0.798 8.003 N38 239 24 239 H18 H18 H 0 1 N N N 16.370 20.300 33.970 -1.531 0.142 -8.143 H18 239 25 239 H191 1H19 H 0 0 N N N 19.890 21.128 34.569 0.734 -0.047 -8.609 H191 239 26 239 H192 2H19 H 0 0 N N N 18.425 21.204 35.281 1.824 -0.148 -7.335 H192 239 27 239 H13 H13 H 0 1 N N N 20.915 19.263 34.946 -1.923 0.152 -4.765 H13 239 28 239 H4 H4 H 0 1 N N N 22.982 18.193 35.292 -2.715 0.203 -2.430 H4 239 29 239 H5 H5 H 0 1 N N N 24.440 16.259 34.719 -2.228 0.144 -0.050 H5 239 30 239 H1 H1 H 0 1 N N N 21.749 14.856 31.772 1.971 -0.198 -0.841 H1 239 31 239 H10 H10 H 0 1 N N N 19.513 15.816 31.526 2.761 -0.259 -3.176 H10 239 32 239 H11 H11 H 0 1 N N N 17.950 17.587 32.213 2.273 -0.199 -5.557 H11 239 33 239 H24 H24 H 0 1 N N N 23.754 14.620 30.771 -1.760 0.010 1.708 H24 239 34 239 H30 H30 H 0 1 N N N 25.695 11.996 32.453 -2.332 -1.008 3.961 H30 239 35 239 H29 H29 H 0 1 N N N 27.480 10.655 31.231 -1.866 -0.857 6.373 H29 239 36 239 H27 H27 H 0 1 N N N 26.705 12.973 27.581 1.681 1.366 5.558 H27 239 37 239 H26 H26 H 0 1 N N N 25.298 14.580 28.962 1.227 1.215 3.144 H26 239 38 239 H371 1H37 H 0 0 N N N 28.147 9.886 28.871 0.759 1.274 7.798 H371 239 39 239 H372 2H37 H 0 0 N N N 28.082 10.958 27.553 -0.722 0.349 8.139 H372 239 40 239 H381 1H38 H 0 0 N N N 30.325 10.881 28.476 1.195 -0.695 8.994 H381 239 41 239 H382 2H38 H 0 0 N N N 29.771 11.440 29.961 0.455 -1.617 7.888 H382 239 42 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 239 N18 C17 DOUB N Z 1 239 N18 H18 SING N N 2 239 C17 N19 SING N N 3 239 C17 C12 SING N N 4 239 N19 H191 SING N N 5 239 N19 H192 SING N N 6 239 C12 C13 DOUB Y N 7 239 C12 C11 SING Y N 8 239 C13 C3 SING Y N 9 239 C13 H13 SING N N 10 239 C3 C4 DOUB Y N 11 239 C3 C2 SING Y N 12 239 C4 C5 SING Y N 13 239 C4 H4 SING N N 14 239 C5 C6 DOUB Y N 15 239 C5 H5 SING N N 16 239 C6 C1 SING Y N 17 239 C6 C23 SING N N 18 239 C1 C2 DOUB Y N 19 239 C1 H1 SING N N 20 239 C2 C10 SING Y N 21 239 C10 C11 DOUB Y N 22 239 C10 H10 SING N N 23 239 C11 H11 SING N N 24 239 C23 O35 DOUB N N 25 239 C23 N24 SING N N 26 239 N24 C25 SING N N 27 239 N24 H24 SING N N 28 239 C25 C30 DOUB Y N 29 239 C25 C26 SING Y N 30 239 C30 C29 SING Y N 31 239 C30 H30 SING N N 32 239 C29 C28 DOUB Y N 33 239 C29 H29 SING N N 34 239 C28 C27 SING Y N 35 239 C28 C37 SING N N 36 239 C27 C26 DOUB Y N 37 239 C27 H27 SING N N 38 239 C26 H26 SING N N 39 239 C37 N38 SING N N 40 239 C37 H371 SING N N 41 239 C37 H372 SING N N 42 239 N38 H381 SING N N 43 239 N38 H382 SING N N 44 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 239 SMILES ACDLabs 10.04 "O=C(Nc1ccc(cc1)CN)c3cc2ccc(C(=[N@H])N)cc2cc3" 239 SMILES_CANONICAL CACTVS 3.341 "NCc1ccc(NC(=O)c2ccc3cc(ccc3c2)C(N)=N)cc1" 239 SMILES CACTVS 3.341 "NCc1ccc(NC(=O)c2ccc3cc(ccc3c2)C(N)=N)cc1" 239 SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "[H]/N=C(/c1ccc2cc(ccc2c1)C(=O)Nc3ccc(cc3)CN)\N" 239 SMILES "OpenEye OEToolkits" 1.5.0 "[H]N=C(c1ccc2cc(ccc2c1)C(=O)Nc3ccc(cc3)CN)N" 239 InChI InChI 1.03 "InChI=1S/C19H18N4O/c20-11-12-1-7-17(8-2-12)23-19(24)16-6-4-13-9-15(18(21)22)5-3-14(13)10-16/h1-10H,11,20H2,(H3,21,22)(H,23,24)" 239 InChIKey InChI 1.03 NLBDETRVUYOIHQ-UHFFFAOYSA-N # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 239 "SYSTEMATIC NAME" ACDLabs 10.04 "N-[4-(aminomethyl)phenyl]-6-carbamimidoylnaphthalene-2-carboxamide" 239 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "N-[4-(aminomethyl)phenyl]-6-carbamimidoyl-naphthalene-2-carboxamide" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 239 "Create component" 2003-04-09 RCSB 239 "Modify descriptor" 2011-06-04 RCSB 239 "Modify synonyms" 2020-06-05 PDBE # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id 239 _pdbx_chem_comp_synonyms.name "6-[N-(4-(AMINOMETHYL)PHENYL)CARBAMYL]-2-NAPHTHALENECARBOXAMIDINE" _pdbx_chem_comp_synonyms.provenance ? _pdbx_chem_comp_synonyms.type ? ##