data_25H # _chem_comp.id 25H _chem_comp.name "{2-[2-(2-amino-6-oxo-1,6-dihydro-9H-purin-9-yl)ethoxy]ethyl}phosphonic acid" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C9 H14 N5 O5 P" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "9-(2-phosphonoethoxyethyl)guanine" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2009-03-05 _chem_comp.pdbx_modified_date 2021-03-01 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 303.212 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 25H _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 3GGJ _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 25H N1 N1 N 0 1 N N N 16.894 17.724 20.448 -4.947 1.372 0.385 N1 25H 1 25H C8 C8 C 0 1 Y N N 18.508 14.033 18.446 -2.562 -2.394 -0.095 C8 25H 2 25H C6 C6 C 0 1 N N N 18.000 17.313 19.772 -5.035 0.055 0.677 C6 25H 3 25H N7 N7 N 0 1 Y N N 19.005 15.288 18.615 -3.720 -2.116 0.430 N7 25H 4 25H C5 C5 C 0 1 Y N N 18.063 15.993 19.298 -3.964 -0.790 0.303 C5 25H 5 25H C2 C2 C 0 1 N N N 15.857 16.875 20.668 -3.848 1.862 -0.255 C2 25H 6 25H OAD OAD O 0 1 N N N 18.892 10.605 14.867 5.139 1.743 0.845 OAD 25H 7 25H PAT PAT P 0 1 N N N 17.825 10.891 13.829 5.385 0.251 0.292 PAT 25H 8 25H OAE OAE O 0 1 N N N 16.866 9.747 13.545 6.775 0.201 -0.519 OAE 25H 9 25H OAC OAC O 0 1 N N N 18.413 11.458 12.557 5.444 -0.693 1.430 OAC 25H 10 25H CAJ CAJ C 0 1 N N N 16.786 12.215 14.512 4.017 -0.218 -0.817 CAJ 25H 11 25H CAH CAH C 0 1 N N N 16.460 11.887 15.972 2.714 -0.292 -0.018 CAH 25H 12 25H OAN OAN O 0 1 N N N 15.977 13.055 16.661 1.642 -0.660 -0.888 OAN 25H 13 25H CAG CAG C 0 1 N N N 15.362 12.745 17.910 0.373 -0.758 -0.237 CAG 25H 14 25H CAI CAI C 0 1 N N N 16.408 12.746 19.019 -0.695 -1.156 -1.258 CAI 25H 15 25H N9 N9 N 0 1 Y N N 17.271 13.942 18.996 -1.995 -1.256 -0.591 N9 25H 16 25H C4 C4 C 0 1 Y N N 16.984 15.137 19.538 -2.864 -0.225 -0.352 C4 25H 17 25H N3 N3 N 0 1 N N N 15.899 15.594 20.214 -2.846 1.088 -0.608 N3 25H 18 25H N2 N2 N 0 1 N N N 14.768 17.307 21.352 -3.785 3.203 -0.539 N2 25H 19 25H O6 O6 O 0 1 N N N 18.996 18.156 19.586 -6.014 -0.393 1.250 O6 25H 20 25H HN1 HN1 H 0 1 N N N 16.844 18.663 20.787 -5.670 1.970 0.628 HN1 25H 21 25H H8 H8 H 0 1 N N N 19.023 13.226 17.946 -2.116 -3.377 -0.132 H8 25H 22 25H HOAD HOAD H 0 0 N N N 19.740 10.545 14.442 5.090 2.416 0.153 HOAD 25H 23 25H HOAE HOAE H 0 0 N N N 16.666 9.724 12.617 7.548 0.440 0.010 HOAE 25H 24 25H HAJ HAJ H 0 1 N N N 17.325 13.173 14.459 3.917 0.527 -1.607 HAJ 25H 25 25H HAJA HAJA H 0 0 N N N 15.855 12.295 13.932 4.226 -1.192 -1.261 HAJA 25H 26 25H HAH HAH H 0 1 N N N 15.685 11.107 16.000 2.814 -1.037 0.771 HAH 25H 27 25H HAHA HAHA H 0 0 N N N 17.376 11.536 16.469 2.504 0.681 0.426 HAHA 25H 28 25H HAG HAG H 0 1 N N N 14.593 13.499 18.134 0.424 -1.513 0.548 HAG 25H 29 25H HAGA HAGA H 0 0 N N N 14.900 11.748 17.849 0.115 0.206 0.202 HAGA 25H 30 25H HAI HAI H 0 1 N N N 15.886 12.715 19.987 -0.746 -0.401 -2.043 HAI 25H 31 25H HAIA HAIA H 0 0 N N N 17.054 11.869 18.866 -0.436 -2.119 -1.697 HAIA 25H 32 25H HN2 HN2 H 0 1 N N N 14.889 18.263 21.618 -4.517 3.787 -0.285 HN2 25H 33 25H HN2A HN2A H 0 0 N N N 13.963 16.751 21.560 -3.010 3.567 -0.994 HN2A 25H 34 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 25H N1 C6 SING N N 1 25H N1 C2 SING N N 2 25H C8 N7 DOUB Y N 3 25H C8 N9 SING Y N 4 25H C6 C5 SING N N 5 25H C6 O6 DOUB N N 6 25H N7 C5 SING Y N 7 25H C5 C4 DOUB Y N 8 25H C2 N3 DOUB N N 9 25H C2 N2 SING N N 10 25H OAD PAT SING N N 11 25H PAT OAE SING N N 12 25H PAT OAC DOUB N N 13 25H PAT CAJ SING N N 14 25H CAJ CAH SING N N 15 25H CAH OAN SING N N 16 25H OAN CAG SING N N 17 25H CAG CAI SING N N 18 25H CAI N9 SING N N 19 25H N9 C4 SING Y N 20 25H C4 N3 SING N N 21 25H N1 HN1 SING N N 22 25H C8 H8 SING N N 23 25H OAD HOAD SING N N 24 25H OAE HOAE SING N N 25 25H CAJ HAJ SING N N 26 25H CAJ HAJA SING N N 27 25H CAH HAH SING N N 28 25H CAH HAHA SING N N 29 25H CAG HAG SING N N 30 25H CAG HAGA SING N N 31 25H CAI HAI SING N N 32 25H CAI HAIA SING N N 33 25H N2 HN2 SING N N 34 25H N2 HN2A SING N N 35 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 25H SMILES ACDLabs 10.04 "O=P(O)(O)CCOCCn1c2N=C(NC(=O)c2nc1)N" 25H SMILES_CANONICAL CACTVS 3.341 "NC1=Nc2n(CCOCC[P](O)(O)=O)cnc2C(=O)N1" 25H SMILES CACTVS 3.341 "NC1=Nc2n(CCOCC[P](O)(O)=O)cnc2C(=O)N1" 25H SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "c1nc2c(n1CCOCCP(=O)(O)O)N=C(NC2=O)N" 25H SMILES "OpenEye OEToolkits" 1.5.0 "c1nc2c(n1CCOCCP(=O)(O)O)N=C(NC2=O)N" 25H InChI InChI 1.03 "InChI=1S/C9H14N5O5P/c10-9-12-7-6(8(15)13-9)11-5-14(7)1-2-19-3-4-20(16,17)18/h5H,1-4H2,(H2,16,17,18)(H3,10,12,13,15)" 25H InChIKey InChI 1.03 KDWYBFCNTYIRFX-UHFFFAOYSA-N # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 25H "SYSTEMATIC NAME" ACDLabs 10.04 "{2-[2-(2-amino-6-oxo-1,6-dihydro-9H-purin-9-yl)ethoxy]ethyl}phosphonic acid" 25H "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "2-[2-(2-amino-6-oxo-1H-purin-9-yl)ethoxy]ethylphosphonic acid" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 25H "Create component" 2009-03-05 PDBJ 25H "Modify aromatic_flag" 2011-06-04 RCSB 25H "Modify descriptor" 2011-06-04 RCSB 25H "Modify synonyms" 2021-03-01 PDBE # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id 25H _pdbx_chem_comp_synonyms.name "9-(2-phosphonoethoxyethyl)guanine" _pdbx_chem_comp_synonyms.provenance ? _pdbx_chem_comp_synonyms.type ? ##