data_25S # _chem_comp.id 25S _chem_comp.name "(R)-N-(3-(1H-indol-3-yl)-1-oxo-1-(pyridin-4-ylamino)propan-2-yl)-4-(4-(3,4-difluorophenyl)piperazin-1-yl)-2-fluorobenzamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C33 H29 F3 N6 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2014-06-23 _chem_comp.pdbx_modified_date 2014-08-15 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 598.618 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 25S _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 4UQH _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site EBI # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 25S O1 O1 O 0 1 N N N -4.034 50.690 -5.454 4.120 -2.271 -0.472 O1 25S 1 25S C5 C5 C 0 1 N N N -4.786 51.651 -5.728 4.835 -1.298 -0.359 C5 25S 2 25S N1 N1 N 0 1 N N N -6.126 51.664 -5.564 6.174 -1.446 -0.324 N1 25S 3 25S C4 C4 C 0 1 Y N N -6.828 50.561 -5.232 6.735 -2.724 -0.305 C4 25S 4 25S C3 C3 C 0 1 Y N N -8.095 50.423 -5.803 7.964 -2.975 -0.914 C3 25S 5 25S C2 C2 C 0 1 Y N N -8.851 49.258 -5.617 8.484 -4.252 -0.873 C2 25S 6 25S N N N 0 1 Y N N -8.398 48.218 -4.873 7.833 -5.228 -0.269 N 25S 7 25S C1 C1 C 0 1 Y N N -7.153 48.316 -4.327 6.668 -5.031 0.319 C1 25S 8 25S C C C 0 1 Y N N -6.336 49.472 -4.496 6.083 -3.782 0.327 C 25S 9 25S C6 C6 C 0 1 N N R -4.199 52.921 -6.351 4.226 0.077 -0.266 C6 25S 10 25S C24 C24 C 0 1 N N N -4.097 52.852 -7.874 4.730 0.938 -1.427 C24 25S 11 25S C25 C25 C 0 1 Y N N -5.454 52.596 -8.444 4.219 2.346 -1.266 C25 25S 12 25S C28 C28 C 0 1 Y N N -6.046 51.296 -8.797 4.833 3.410 -0.468 C28 25S 13 25S C29 C29 C 0 1 Y N N -5.564 50.014 -8.763 5.974 3.486 0.333 C29 25S 14 25S C30 C30 C 0 1 Y N N -6.424 49.004 -9.201 6.283 4.658 0.964 C30 25S 15 25S C31 C31 C 0 1 Y N N -7.721 49.272 -9.649 5.471 5.774 0.815 C31 25S 16 25S C32 C32 C 0 1 Y N N -8.242 50.557 -9.691 4.341 5.721 0.030 C32 25S 17 25S C27 C27 C 0 1 Y N N -7.413 51.599 -9.282 4.007 4.538 -0.622 C27 25S 18 25S N5 N5 N 0 1 Y N N -7.563 52.941 -9.204 2.973 4.173 -1.454 N5 25S 19 25S C26 C26 C 0 1 Y N N -6.445 53.547 -8.711 3.119 2.866 -1.833 C26 25S 20 25S N2 N2 N 0 1 N N N -4.901 54.141 -6.016 2.767 -0.029 -0.334 N2 25S 21 25S C7 C7 C 0 1 N N N -4.807 54.655 -4.805 2.056 -0.278 0.784 C7 25S 22 25S O O O 0 1 N N N -4.206 54.047 -3.956 2.627 -0.415 1.849 O 25S 23 25S C8 C8 C 0 1 Y N N -5.398 55.972 -4.428 0.588 -0.385 0.715 C8 25S 24 25S C23 C23 C 0 1 Y N N -5.904 56.961 -5.399 -0.152 -0.644 1.876 C23 25S 25 25S F2 F2 F 0 1 N N N -5.882 56.706 -6.701 0.477 -0.797 3.062 F2 25S 26 25S C22 C22 C 0 1 Y N N -6.445 58.152 -4.959 -1.526 -0.743 1.804 C22 25S 27 25S C11 C11 C 0 1 Y N N -6.506 58.429 -3.594 -2.170 -0.584 0.580 C11 25S 28 25S C10 C10 C 0 1 Y N N -6.002 57.518 -2.670 -1.431 -0.328 -0.572 C10 25S 29 25S C9 C9 C 0 1 Y N N -5.460 56.309 -3.080 -0.070 -0.223 -0.507 C9 25S 30 25S N3 N3 N 0 1 N N N -7.025 59.626 -3.140 -3.555 -0.683 0.507 N3 25S 31 25S C21 C21 C 0 1 N N N -8.244 60.129 -3.759 -4.025 -0.485 -0.871 C21 25S 32 25S C20 C20 C 0 1 N N N -8.095 61.634 -3.672 -5.542 -0.680 -0.922 C20 25S 33 25S N4 N4 N 0 1 N N N -8.336 61.816 -2.247 -6.187 0.271 -0.006 N4 25S 34 25S C13 C13 C 0 1 N N N -7.557 61.053 -1.268 -5.717 0.072 1.372 C13 25S 35 25S C12 C12 C 0 1 N N N -6.405 60.363 -2.032 -4.200 0.268 1.423 C12 25S 36 25S C14 C14 C 0 1 Y N N -9.390 62.652 -1.879 -7.580 0.172 -0.079 C14 25S 37 25S C19 C19 C 0 1 Y N N -10.613 62.277 -2.438 -8.378 0.989 0.711 C19 25S 38 25S C18 C18 C 0 1 Y N N -11.771 62.987 -2.207 -9.754 0.889 0.638 C18 25S 39 25S C17 C17 C 0 1 Y N N -11.701 64.088 -1.397 -10.339 -0.024 -0.222 C17 25S 40 25S F1 F1 F 0 1 N N N -12.839 64.745 -1.194 -11.685 -0.119 -0.291 F1 25S 41 25S C16 C16 C 0 1 Y N N -10.420 64.528 -0.783 -9.545 -0.841 -1.013 C16 25S 42 25S F F F 0 1 N N N -10.421 65.635 0.005 -10.118 -1.731 -1.852 F 25S 43 25S C15 C15 C 0 1 Y N N -9.267 63.779 -1.053 -8.167 -0.740 -0.946 C15 25S 44 25S H1 H1 H 0 1 N N N -6.617 52.525 -5.694 6.748 -0.664 -0.311 H1 25S 45 25S H6 H6 H 0 1 N N N -3.171 53.013 -5.970 4.513 0.538 0.679 H6 25S 46 25S H3 H3 H 0 1 N N N -8.499 51.228 -6.398 8.501 -2.180 -1.411 H3 25S 47 25S H H H 0 1 N N N -5.348 49.509 -4.062 5.132 -3.626 0.814 H 25S 48 25S H2 H2 H 0 1 N N N -9.824 49.186 -6.080 9.435 -4.455 -1.342 H2 25S 49 25S HA HA H 0 1 N N N -6.772 47.489 -3.746 6.168 -5.857 0.803 HA 25S 50 25S H241 H241 H 0 0 N N N -3.709 53.806 -8.261 5.820 0.944 -1.429 H241 25S 51 25S H242 H242 H 0 0 N N N -3.417 52.036 -8.161 4.367 0.525 -2.369 H242 25S 52 25S HB HB H 0 1 N N N -5.461 54.598 -6.707 2.312 0.080 -1.184 HB 25S 53 25S H26 H26 H 0 1 N N N -6.340 54.610 -8.550 2.447 2.332 -2.488 H26 25S 54 25S H29 H29 H 0 1 N N N -4.566 49.794 -8.414 6.610 2.622 0.454 H29 25S 55 25S H30 H30 H 0 1 N N N -6.075 47.982 -9.193 7.166 4.716 1.584 H30 25S 56 25S H31 H31 H 0 1 N N N -8.340 48.449 -9.974 5.728 6.694 1.320 H31 25S 57 25S H32 H32 H 0 1 N N N -9.251 50.742 -10.028 3.716 6.595 -0.080 H32 25S 58 25S H5 H5 H 0 1 N N N -8.393 53.429 -9.475 2.251 4.757 -1.734 H5 25S 59 25S H9 H9 H 0 1 N N N -5.080 55.619 -2.341 0.498 -0.019 -1.403 H9 25S 60 25S H22 H22 H 0 1 N N N -6.821 58.870 -5.673 -2.102 -0.942 2.695 H22 25S 61 25S H10 H10 H 0 1 N N N -6.034 57.756 -1.617 -1.935 -0.206 -1.519 H10 25S 62 25S H211 H211 H 0 0 N N N -8.316 59.802 -4.807 -3.777 0.525 -1.197 H211 25S 63 25S H212 H212 H 0 0 N N N -9.133 59.790 -3.207 -3.543 -1.209 -1.527 H212 25S 64 25S H121 H121 H 0 0 N N N -5.869 59.670 -1.367 -3.845 0.092 2.439 H121 25S 65 25S H122 H122 H 0 0 N N N -5.703 61.115 -2.421 -3.954 1.286 1.123 H122 25S 66 25S H201 H201 H 0 0 N N N -7.087 61.964 -3.963 -5.898 -0.504 -1.937 H201 25S 67 25S H202 H202 H 0 0 N N N -8.844 62.157 -4.285 -5.788 -1.698 -0.621 H202 25S 68 25S H131 H131 H 0 0 N N N -7.149 61.729 -0.503 -6.199 0.797 2.029 H131 25S 69 25S H132 H132 H 0 0 N N N -8.195 60.297 -0.787 -5.965 -0.937 1.699 H132 25S 70 25S H19 H19 H 0 1 N N N -10.653 61.403 -3.071 -7.923 1.701 1.383 H19 25S 71 25S H15 H15 H 0 1 N N N -8.311 64.061 -0.637 -7.548 -1.373 -1.565 H15 25S 72 25S H18 H18 H 0 1 N N N -12.707 62.683 -2.652 -10.374 1.525 1.253 H18 25S 73 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 25S O1 C5 DOUB N N 1 25S C5 N1 SING N N 2 25S C5 C6 SING N N 3 25S N1 C4 SING N N 4 25S C4 C3 DOUB Y N 5 25S C4 C SING Y N 6 25S C3 C2 SING Y N 7 25S C2 N DOUB Y N 8 25S N C1 SING Y N 9 25S C1 C DOUB Y N 10 25S C6 C24 SING N N 11 25S C6 N2 SING N N 12 25S C24 C25 SING N N 13 25S C25 C28 SING Y N 14 25S C25 C26 DOUB Y N 15 25S C28 C29 SING Y N 16 25S C28 C27 DOUB Y N 17 25S C29 C30 DOUB Y N 18 25S C30 C31 SING Y N 19 25S C31 C32 DOUB Y N 20 25S C32 C27 SING Y N 21 25S C27 N5 SING Y N 22 25S N5 C26 SING Y N 23 25S N2 C7 SING N N 24 25S C7 O DOUB N N 25 25S C7 C8 SING N N 26 25S C8 C23 SING Y N 27 25S C8 C9 DOUB Y N 28 25S C23 F2 SING N N 29 25S C23 C22 DOUB Y N 30 25S C22 C11 SING Y N 31 25S C11 C10 DOUB Y N 32 25S C11 N3 SING N N 33 25S C10 C9 SING Y N 34 25S N3 C21 SING N N 35 25S N3 C12 SING N N 36 25S C21 C20 SING N N 37 25S C20 N4 SING N N 38 25S N4 C13 SING N N 39 25S N4 C14 SING N N 40 25S C13 C12 SING N N 41 25S C14 C19 SING Y N 42 25S C14 C15 DOUB Y N 43 25S C19 C18 DOUB Y N 44 25S C18 C17 SING Y N 45 25S C17 F1 SING N N 46 25S C17 C16 DOUB Y N 47 25S C16 F SING N N 48 25S C16 C15 SING Y N 49 25S N1 H1 SING N N 50 25S C6 H6 SING N N 51 25S C3 H3 SING N N 52 25S C H SING N N 53 25S C2 H2 SING N N 54 25S C1 HA SING N N 55 25S C24 H241 SING N N 56 25S C24 H242 SING N N 57 25S N2 HB SING N N 58 25S C26 H26 SING N N 59 25S C29 H29 SING N N 60 25S C30 H30 SING N N 61 25S C31 H31 SING N N 62 25S C32 H32 SING N N 63 25S N5 H5 SING N N 64 25S C9 H9 SING N N 65 25S C22 H22 SING N N 66 25S C10 H10 SING N N 67 25S C21 H211 SING N N 68 25S C21 H212 SING N N 69 25S C12 H121 SING N N 70 25S C12 H122 SING N N 71 25S C20 H201 SING N N 72 25S C20 H202 SING N N 73 25S C13 H131 SING N N 74 25S C13 H132 SING N N 75 25S C19 H19 SING N N 76 25S C15 H15 SING N N 77 25S C18 H18 SING N N 78 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 25S SMILES ACDLabs 12.01 "O=C(Nc1ccncc1)C(NC(=O)c4ccc(N3CCN(c2cc(F)c(F)cc2)CC3)cc4F)Cc6c5ccccc5nc6" 25S InChI InChI 1.03 "InChI=1S/C33H29F3N6O2/c34-27-8-6-24(19-29(27)36)42-15-13-41(14-16-42)23-5-7-26(28(35)18-23)32(43)40-31(33(44)39-22-9-11-37-12-10-22)17-21-20-38-30-4-2-1-3-25(21)30/h1-12,18-20,31,38H,13-17H2,(H,40,43)(H,37,39,44)/t31-/m1/s1" 25S InChIKey InChI 1.03 UJJHTUJDTNONGY-WJOKGBTCSA-N 25S SMILES_CANONICAL CACTVS 3.385 "Fc1ccc(cc1F)N2CCN(CC2)c3ccc(C(=O)N[C@H](Cc4c[nH]c5ccccc45)C(=O)Nc6ccncc6)c(F)c3" 25S SMILES CACTVS 3.385 "Fc1ccc(cc1F)N2CCN(CC2)c3ccc(C(=O)N[CH](Cc4c[nH]c5ccccc45)C(=O)Nc6ccncc6)c(F)c3" 25S SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "c1ccc2c(c1)c(c[nH]2)C[C@H](C(=O)Nc3ccncc3)NC(=O)c4ccc(cc4F)N5CCN(CC5)c6ccc(c(c6)F)F" 25S SMILES "OpenEye OEToolkits" 1.7.6 "c1ccc2c(c1)c(c[nH]2)CC(C(=O)Nc3ccncc3)NC(=O)c4ccc(cc4F)N5CCN(CC5)c6ccc(c(c6)F)F" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 25S "SYSTEMATIC NAME" ACDLabs 12.01 "Nalpha-{4-[4-(3,4-difluorophenyl)piperazin-1-yl]-2-fluorobenzoyl}-N-pyridin-4-yl-D-tryptophanamide" 25S "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "4-[4-[3,4-bis(fluoranyl)phenyl]piperazin-1-yl]-2-fluoranyl-N-[(2R)-3-(1H-indol-3-yl)-1-oxidanylidene-1-(pyridin-4-ylamino)propan-2-yl]benzamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 25S "Create component" 2014-06-23 EBI 25S "Initial release" 2014-08-20 RCSB #