data_26A # _chem_comp.id 26A _chem_comp.name 6N-DIMETHYLADENOSINE _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C12 H17 N5 O4" _chem_comp.mon_nstd_parent_comp_id A _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2005-07-28 _chem_comp.pdbx_modified_date 2011-06-04 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 295.294 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 26A _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details ? _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 2A9Y _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 26A C10 C10 C 0 1 N N N -5.760 -40.976 -107.913 5.731 0.001 -0.322 C10 26A 1 26A N6 N6 N 0 1 N N N -7.020 -40.772 -107.230 4.496 -0.738 -0.615 N6 26A 2 26A C9 C9 C 0 1 N N N -7.858 -39.562 -107.535 4.544 -1.973 0.180 C9 26A 3 26A C6 C6 C 0 1 Y N N -7.595 -41.780 -106.502 3.451 0.018 -0.113 C6 26A 4 26A C5 C5 C 0 1 Y N N -8.888 -41.693 -105.808 2.122 -0.419 -0.240 C5 26A 5 26A C4 C4 C 0 1 Y N N -9.340 -42.898 -105.197 1.104 0.389 0.295 C4 26A 6 26A N3 N3 N 0 1 Y N N -8.677 -44.091 -105.265 1.432 1.533 0.887 N3 26A 7 26A C2 C2 C 0 1 Y N N -7.504 -44.070 -105.915 2.691 1.905 0.977 C2 26A 8 26A N1 N1 N 0 1 Y N N -6.933 -42.977 -106.476 3.682 1.177 0.495 N1 26A 9 26A N7 N7 N 0 1 Y N N -9.788 -40.695 -105.516 1.524 -1.511 -0.774 N7 26A 10 26A C8 C8 C 0 1 Y N N -10.815 -41.260 -104.794 0.236 -1.423 -0.613 C8 26A 11 26A N9 N9 N 0 1 Y N N -10.479 -42.603 -104.535 -0.073 -0.268 0.041 N9 26A 12 26A "C1'" C1* C 0 1 N N R -11.287 -43.589 -103.784 -1.417 0.188 0.407 "C1'" 26A 13 26A "O4'" O4* O 0 1 N N N -12.461 -43.746 -104.573 -2.330 -0.930 0.461 "O4'" 26A 14 26A "C4'" C4* C 0 1 N N R -13.388 -44.529 -103.730 -3.647 -0.352 0.329 "C4'" 26A 15 26A "C5'" C5* C 0 1 N N N -14.798 -44.466 -104.234 -4.649 -1.411 -0.135 "C5'" 26A 16 26A "O5'" O5* O 0 1 N N N -14.867 -45.010 -105.579 -4.811 -2.394 0.890 "O5'" 26A 17 26A "C2'" C2* C 0 1 N N R -11.829 -43.164 -102.417 -1.987 1.114 -0.689 "C2'" 26A 18 26A "O2'" O2* O 0 1 N N N -10.837 -43.331 -101.459 -1.819 2.487 -0.331 "O2'" 26A 19 26A "C3'" C3* C 0 1 N N S -13.170 -43.951 -102.349 -3.489 0.749 -0.743 "C3'" 26A 20 26A "O3'" O3* O 0 1 N N N -12.997 -45.041 -101.445 -4.294 1.884 -0.418 "O3'" 26A 21 26A H101 1H10 H 0 0 N N N -5.305 -41.917 -107.570 5.742 0.930 -0.892 H101 26A 22 26A H102 2H10 H 0 0 N N N -5.083 -40.138 -107.690 5.775 0.227 0.743 H102 26A 23 26A H103 3H10 H 0 0 N N N -5.935 -41.028 -108.998 6.592 -0.606 -0.600 H103 26A 24 26A H91 1H9 H 0 1 N N N -8.808 -39.879 -107.990 4.714 -1.723 1.228 H91 26A 25 26A H92 2H9 H 0 1 N N N -7.317 -38.908 -108.235 3.597 -2.505 0.082 H92 26A 26 26A H93 3H9 H 0 1 N N N -8.063 -39.013 -106.604 5.355 -2.605 -0.179 H93 26A 27 26A H2 H2 H 0 1 N N N -6.969 -45.004 -105.998 2.923 2.840 1.465 H2 26A 28 26A H8 H8 H 0 1 N N N -11.720 -40.761 -104.481 -0.482 -2.157 -0.947 H8 26A 29 26A "H1'" H1* H 0 1 N N N -10.630 -44.454 -103.609 -1.393 0.705 1.366 "H1'" 26A 30 26A "H4'" H4* H 0 1 N N N -13.196 -45.612 -103.737 -3.967 0.083 1.276 "H4'" 26A 31 26A "H5'1" 1H5* H 0 0 N N N -15.131 -43.418 -104.250 -5.609 -0.938 -0.339 "H5'1" 26A 32 26A "H5'2" 2H5* H 0 0 N N N -15.449 -45.054 -103.570 -4.279 -1.889 -1.042 "H5'2" 26A 33 26A "H5'" H5* H 0 1 N N N -14.882 -44.299 -106.208 -5.449 -3.041 0.558 "H5'" 26A 34 26A "H2'" H2* H 0 1 N N N -12.071 -42.107 -102.230 -1.510 0.909 -1.647 "H2'" 26A 35 26A "HO'2" 2HO* H 0 0 N N N -9.988 -43.369 -101.884 -2.247 3.011 -1.022 "HO'2" 26A 36 26A "H3'" H3* H 0 1 N N N -14.006 -43.313 -102.027 -3.755 0.363 -1.728 "H3'" 26A 37 26A "HO'3" 3HO* H 0 0 N N N -12.959 -45.855 -101.933 -5.212 1.582 -0.407 "HO'3" 26A 38 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 26A C10 N6 SING N N 1 26A C10 H101 SING N N 2 26A C10 H102 SING N N 3 26A C10 H103 SING N N 4 26A N6 C9 SING N N 5 26A N6 C6 SING N N 6 26A C9 H91 SING N N 7 26A C9 H92 SING N N 8 26A C9 H93 SING N N 9 26A C6 C5 DOUB Y N 10 26A C6 N1 SING Y N 11 26A C5 C4 SING Y N 12 26A C5 N7 SING Y N 13 26A C4 N3 DOUB Y N 14 26A C4 N9 SING Y N 15 26A N3 C2 SING Y N 16 26A C2 N1 DOUB Y N 17 26A C2 H2 SING N N 18 26A N7 C8 DOUB Y N 19 26A C8 N9 SING Y N 20 26A C8 H8 SING N N 21 26A N9 "C1'" SING N N 22 26A "C1'" "O4'" SING N N 23 26A "C1'" "C2'" SING N N 24 26A "C1'" "H1'" SING N N 25 26A "O4'" "C4'" SING N N 26 26A "C4'" "C5'" SING N N 27 26A "C4'" "C3'" SING N N 28 26A "C4'" "H4'" SING N N 29 26A "C5'" "O5'" SING N N 30 26A "C5'" "H5'1" SING N N 31 26A "C5'" "H5'2" SING N N 32 26A "O5'" "H5'" SING N N 33 26A "C2'" "O2'" SING N N 34 26A "C2'" "C3'" SING N N 35 26A "C2'" "H2'" SING N N 36 26A "O2'" "HO'2" SING N N 37 26A "C3'" "O3'" SING N N 38 26A "C3'" "H3'" SING N N 39 26A "O3'" "HO'3" SING N N 40 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 26A SMILES ACDLabs 10.04 "n2c1c(ncnc1N(C)C)n(c2)C3OC(C(O)C3O)CO" 26A SMILES_CANONICAL CACTVS 3.341 "CN(C)c1ncnc2n(cnc12)[C@@H]3O[C@H](CO)[C@@H](O)[C@H]3O" 26A SMILES CACTVS 3.341 "CN(C)c1ncnc2n(cnc12)[CH]3O[CH](CO)[CH](O)[CH]3O" 26A SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "CN(C)c1c2c(ncn1)n(cn2)[C@H]3[C@@H]([C@@H]([C@H](O3)CO)O)O" 26A SMILES "OpenEye OEToolkits" 1.5.0 "CN(C)c1c2c(ncn1)n(cn2)C3C(C(C(O3)CO)O)O" 26A InChI InChI 1.03 "InChI=1S/C12H17N5O4/c1-16(2)10-7-11(14-4-13-10)17(5-15-7)12-9(20)8(19)6(3-18)21-12/h4-6,8-9,12,18-20H,3H2,1-2H3/t6-,8-,9-,12-/m1/s1" 26A InChIKey InChI 1.03 WVGPGNPCZPYCLK-WOUKDFQISA-N # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 26A "SYSTEMATIC NAME" ACDLabs 10.04 N,N-dimethyladenosine 26A "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "(2R,3R,4S,5R)-2-(6-dimethylaminopurin-9-yl)-5-(hydroxymethyl)oxolane-3,4-diol" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 26A "Create component" 2005-07-28 RCSB 26A "Modify descriptor" 2011-06-04 RCSB #