data_28H # _chem_comp.id 28H _chem_comp.name "(2R,3R)-3-hydroxy-2,4-dimethylpentanoic acid" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C7 H14 O3" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2013-09-10 _chem_comp.pdbx_modified_date 2024-09-27 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 146.184 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 28H _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag Y _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 4MEX _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm Y # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 28H CCB CCB C 0 1 N N N N N N 20.140 111.536 2.318 -2.185 0.690 -1.280 CCB 28H 1 28H CCA CCA C 0 1 N N N N N N 19.811 110.145 2.862 -1.893 0.439 0.200 CCA 28H 2 28H CCC CCC C 0 1 N N N N N N 19.341 109.246 1.717 -3.024 -0.393 0.809 CCC 28H 3 28H CBZ CBZ C 0 1 N N R N N N 21.060 109.539 3.506 -0.572 -0.320 0.338 CBZ 28H 4 28H OCF OCF O 0 1 N N N N N N 20.755 108.235 4.007 -0.625 -1.515 -0.443 OCF 28H 5 28H CBY CBY C 0 1 N N R N N N 22.175 109.438 2.463 0.576 0.562 -0.157 CBY 28H 6 28H CCE CCE C 0 1 N N N N N N 23.532 109.614 3.146 0.633 1.842 0.679 CCE 28H 7 28H CBX CBX C 0 1 N N N Y N Y 22.118 108.067 1.786 1.878 -0.184 -0.022 CBX 28H 8 28H OCD OCD O 0 1 N N N Y N Y 21.521 107.910 0.722 1.887 -1.307 0.425 OCD 28H 9 28H H1 H1 H 0 1 N N N N N N 20.478 112.182 3.142 -1.380 1.282 -1.714 H1 28H 10 28H H2 H2 H 0 1 N N N N N N 20.937 111.456 1.564 -2.257 -0.264 -1.803 H2 28H 11 28H H3 H3 H 0 1 N N N N N N 19.241 111.971 1.856 -3.127 1.230 -1.378 H3 28H 12 28H H4 H4 H 0 1 N N N N N N 19.013 110.226 3.615 -1.821 1.392 0.723 H4 28H 13 28H H5 H5 H 0 1 N N N N N N 19.105 108.246 2.109 -3.096 -1.347 0.286 H5 28H 14 28H H6 H6 H 0 1 N N N N N N 18.442 109.681 1.255 -2.816 -0.572 1.864 H6 28H 15 28H H7 H7 H 0 1 N N N N N N 20.138 109.165 0.963 -3.966 0.147 0.711 H7 28H 16 28H H8 H8 H 0 1 N N N N N N 21.394 110.194 4.324 -0.407 -0.576 1.384 H8 28H 17 28H H9 H9 H 0 1 N N N N N N 20.063 108.298 4.655 -0.769 -1.362 -1.387 H9 28H 18 28H H10 H10 H 0 1 N N N N N N 22.041 110.225 1.707 0.412 0.819 -1.204 H10 28H 19 28H H11 H11 H 0 1 N N N N N N 23.573 110.600 3.633 0.798 1.586 1.726 H11 28H 20 28H H12 H12 H 0 1 N N N N N N 23.667 108.826 3.902 1.451 2.471 0.327 H12 28H 21 28H H13 H13 H 0 1 N N N N N N 24.332 109.543 2.395 -0.308 2.383 0.581 H13 28H 22 28H OXT OXT O 0 1 N Y N Y N Y ? ? ? 3.028 0.398 -0.397 OXT 28H 23 28H HXT HXT H 0 1 N Y N Y N Y ? ? ? 3.837 -0.121 -0.291 HXT 28H 24 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 28H OCD CBX DOUB N N 1 28H CCC CCA SING N N 2 28H CBX CBY SING N N 3 28H CCB CCA SING N N 4 28H CBY CCE SING N N 5 28H CBY CBZ SING N N 6 28H CCA CBZ SING N N 7 28H CBZ OCF SING N N 8 28H CCB H1 SING N N 9 28H CCB H2 SING N N 10 28H CCB H3 SING N N 11 28H CCA H4 SING N N 12 28H CCC H5 SING N N 13 28H CCC H6 SING N N 14 28H CCC H7 SING N N 15 28H CBZ H8 SING N N 16 28H OCF H9 SING N N 17 28H CBY H10 SING N N 18 28H CCE H11 SING N N 19 28H CCE H12 SING N N 20 28H CCE H13 SING N N 21 28H CBX OXT SING N N 22 28H OXT HXT SING N N 23 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 28H SMILES ACDLabs 12.01 "O=C(O)C(C)C(O)C(C)C" 28H InChI InChI 1.03 "InChI=1S/C7H14O3/c1-4(2)6(8)5(3)7(9)10/h4-6,8H,1-3H3,(H,9,10)/t5-,6-/m1/s1" 28H InChIKey InChI 1.03 ICRIJRMABYUYBG-PHDIDXHHSA-N 28H SMILES_CANONICAL CACTVS 3.385 "CC(C)[C@@H](O)[C@@H](C)C(O)=O" 28H SMILES CACTVS 3.385 "CC(C)[CH](O)[CH](C)C(O)=O" 28H SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "C[C@H]([C@@H](C(C)C)O)C(=O)O" 28H SMILES "OpenEye OEToolkits" 1.7.6 "CC(C)C(C(C)C(=O)O)O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 28H "SYSTEMATIC NAME" ACDLabs 12.01 "(2R,3R)-3-hydroxy-2,4-dimethylpentanoic acid" 28H "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "(2R,3R)-2,4-dimethyl-3-oxidanyl-pentanoic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 28H "Create component" 2013-09-10 RCSB 28H "Initial release" 2014-05-21 RCSB 28H "Modify backbone" 2023-11-03 PDBE 28H "Modify PCM" 2024-09-27 PDBE # _pdbx_chem_comp_pcm.pcm_id 1 _pdbx_chem_comp_pcm.comp_id 28H _pdbx_chem_comp_pcm.modified_residue_id ? _pdbx_chem_comp_pcm.type None _pdbx_chem_comp_pcm.category "Non-standard residue" _pdbx_chem_comp_pcm.position "Amino-acid side chain and backbone" _pdbx_chem_comp_pcm.polypeptide_position N-terminal _pdbx_chem_comp_pcm.comp_id_linking_atom ? _pdbx_chem_comp_pcm.modified_residue_id_linking_atom ? _pdbx_chem_comp_pcm.uniprot_specific_ptm_accession ? _pdbx_chem_comp_pcm.uniprot_generic_ptm_accession ? #