data_29R # _chem_comp.id 29R _chem_comp.name "2,9-N,N-DI(4-CARBOXYBUTYL)-7-N-METHYLGUANINE" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C16 H24 N5 O5" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 1 _chem_comp.pdbx_initial_date 2013-10-10 _chem_comp.pdbx_modified_date 2014-09-05 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 366.392 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 29R _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 4CB6 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site EBI # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 29R N1 N1 N 0 1 N N N -8.699 5.993 43.907 1.463 3.420 -0.555 N1 29R 1 29R C2 C2 C 0 1 N N N -8.455 7.351 44.065 0.555 2.454 -0.236 C2 29R 2 29R N2 N2 N 0 1 N N N -9.065 8.029 45.038 -0.784 2.729 -0.366 N2 29R 3 29R N3 N3 N 0 1 N N N -7.586 8.008 43.260 0.923 1.269 0.190 N3 29R 4 29R C4 C4 C 0 1 Y N N -6.932 7.320 42.299 2.225 0.956 0.332 C4 29R 5 29R C5 C5 C 0 1 Y N N -7.162 5.959 42.132 3.196 1.912 0.019 C5 29R 6 29R C6 C6 C 0 1 N N N -8.049 5.277 42.940 2.787 3.176 -0.437 C6 29R 7 29R O6 O6 O 0 1 N N N -8.267 4.042 42.810 3.608 4.033 -0.720 O6 29R 8 29R N7 N7 N 0 1 Y N N -6.399 5.525 41.108 4.418 1.313 0.259 N7 29R 9 29R C8 C8 C 0 1 Y N N -5.707 6.602 40.641 4.167 0.062 0.695 C8 29R 10 29R N9 N9 N 1 1 Y N N -6.024 7.694 41.387 2.878 -0.147 0.737 N9 29R 11 29R C11 C11 C 0 1 N N N -5.504 9.064 41.288 2.240 -1.395 1.163 C11 29R 12 29R C12 C12 C 0 1 N N N -6.322 9.933 40.389 1.937 -2.257 -0.064 C12 29R 13 29R C13 C13 C 0 1 N N N -5.687 11.319 40.226 1.271 -3.561 0.381 C13 29R 14 29R C14 C14 C 0 1 N N N -6.087 12.187 41.414 0.967 -4.423 -0.845 C14 29R 15 29R C15 C15 C 0 1 N N N -5.666 13.624 41.268 0.311 -5.707 -0.407 C15 29R 16 29R O16 O16 O 0 1 N N N -5.033 13.943 40.233 0.107 -5.911 0.766 O16 29R 17 29R O17 O17 O 0 1 N N N -5.979 14.416 42.199 -0.047 -6.623 -1.320 O17 29R 18 29R C31 C31 C 0 1 N N N -8.726 9.420 45.324 -1.778 1.707 -0.030 C31 29R 19 29R C32 C32 C 0 1 N N N -9.692 10.389 44.706 -3.183 2.266 -0.261 C32 29R 20 29R C33 C33 C 0 1 N N N -9.449 11.757 45.387 -4.221 1.199 0.090 C33 29R 21 29R C34 C34 C 0 1 N N N -10.153 12.924 44.674 -5.626 1.758 -0.142 C34 29R 22 29R C35 C35 C 0 1 N N N -9.176 14.083 44.603 -6.649 0.707 0.205 C35 29R 23 29R O36 O36 O 0 1 N N N -8.746 14.566 45.679 -6.291 -0.379 0.596 O36 29R 24 29R O37 O37 O 0 1 N N N -8.803 14.513 43.479 -7.958 0.976 0.078 O37 29R 25 29R CM7 CM7 C 0 1 N N N -6.309 4.162 40.552 5.737 1.923 0.076 CM7 29R 26 29R HN1 HN1 H 0 1 N N N -9.356 5.535 44.506 1.157 4.285 -0.872 HN1 29R 27 29R HN2 HN2 H 0 1 N N N -9.770 7.575 45.583 -1.072 3.601 -0.681 HN2 29R 28 29R H8 H8 H 0 1 N N N -5.017 6.590 39.811 4.920 -0.662 0.969 H8 29R 29 29R H11 H11 H 0 1 N N N -5.495 9.509 42.294 2.910 -1.936 1.831 H11 29R 30 29R H11A H11A H 0 0 N N N -4.477 9.022 40.896 1.311 -1.168 1.687 H11A 29R 31 29R H12 H12 H 0 1 N N N -6.398 9.455 39.401 1.267 -1.716 -0.731 H12 29R 32 29R H12A H12A H 0 0 N N N -7.328 10.048 40.819 2.866 -2.484 -0.587 H12A 29R 33 29R H13 H13 H 0 1 N N N -4.592 11.222 40.192 1.941 -4.102 1.049 H13 29R 34 29R H13A H13A H 0 0 N N N -6.044 11.781 39.294 0.342 -3.334 0.905 H13A 29R 35 29R H14 H14 H 0 1 N N N -7.181 12.153 41.519 0.297 -3.882 -1.513 H14 29R 36 29R H14A H14A H 0 0 N N N -5.618 11.776 42.320 1.896 -4.650 -1.369 H14A 29R 37 29R H31 H31 H 0 1 N N N -8.729 9.566 46.414 -1.627 0.832 -0.661 H31 29R 38 29R H31A H31A H 0 0 N N N -7.720 9.626 44.929 -1.668 1.424 1.017 H31A 29R 39 29R H32 H32 H 0 1 N N N -9.510 10.467 43.624 -3.334 3.142 0.370 H32 29R 40 29R H32A H32A H 0 0 N N N -10.726 10.057 44.881 -3.293 2.550 -1.308 H32A 29R 41 29R H33 H33 H 0 1 N N N -9.821 11.704 46.421 -4.070 0.323 -0.541 H33 29R 42 29R H33A H33A H 0 0 N N N -8.367 11.955 45.397 -4.111 0.916 1.137 H33A 29R 43 29R H34 H34 H 0 1 N N N -10.446 12.619 43.659 -5.778 2.634 0.490 H34 29R 44 29R H34A H34A H 0 0 N N N -11.048 13.223 45.240 -5.737 2.041 -1.188 H34A 29R 45 29R HM7 HM7 H 0 1 N N N -5.590 4.152 39.719 6.041 2.416 0.999 HM7 29R 46 29R HM7A HM7A H 0 0 N N N -5.972 3.468 41.336 6.462 1.150 -0.178 HM7A 29R 47 29R HM7B HM7B H 0 0 N N N -7.298 3.849 40.186 5.690 2.656 -0.729 HM7B 29R 48 29R H17 H17 H 0 1 N N N -5.662 15.288 41.994 -0.464 -7.431 -0.991 H17 29R 49 29R H37 H37 H 0 1 N N N -8.180 15.220 43.601 -8.576 0.270 0.312 H37 29R 50 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 29R N1 C2 SING N N 1 29R N1 C6 SING N N 2 29R C2 N2 SING N N 3 29R C2 N3 DOUB N N 4 29R N2 C31 SING N N 5 29R N3 C4 SING N N 6 29R C4 C5 DOUB Y N 7 29R C4 N9 SING Y N 8 29R C5 C6 SING N N 9 29R C5 N7 SING Y N 10 29R C6 O6 DOUB N N 11 29R N7 C8 SING Y N 12 29R N7 CM7 SING N N 13 29R C8 N9 DOUB Y N 14 29R N9 C11 SING N N 15 29R C11 C12 SING N N 16 29R C12 C13 SING N N 17 29R C13 C14 SING N N 18 29R C14 C15 SING N N 19 29R C15 O16 DOUB N N 20 29R C15 O17 SING N N 21 29R C31 C32 SING N N 22 29R C32 C33 SING N N 23 29R C33 C34 SING N N 24 29R C34 C35 SING N N 25 29R C35 O36 DOUB N N 26 29R C35 O37 SING N N 27 29R N1 HN1 SING N N 28 29R N2 HN2 SING N N 29 29R C8 H8 SING N N 30 29R C11 H11 SING N N 31 29R C11 H11A SING N N 32 29R C12 H12 SING N N 33 29R C12 H12A SING N N 34 29R C13 H13 SING N N 35 29R C13 H13A SING N N 36 29R C14 H14 SING N N 37 29R C14 H14A SING N N 38 29R C31 H31 SING N N 39 29R C31 H31A SING N N 40 29R C32 H32 SING N N 41 29R C32 H32A SING N N 42 29R C33 H33 SING N N 43 29R C33 H33A SING N N 44 29R C34 H34 SING N N 45 29R C34 H34A SING N N 46 29R CM7 HM7 SING N N 47 29R CM7 HM7A SING N N 48 29R CM7 HM7B SING N N 49 29R O17 H17 SING N N 50 29R O37 H37 SING N N 51 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 29R SMILES ACDLabs 12.01 "O=C(O)CCCCNC1=Nc2c(C(=O)N1)n(c[n+]2CCCCC(=O)O)C" 29R InChI InChI 1.03 "InChI=1S/C16H23N5O5/c1-20-10-21(9-5-3-7-12(24)25)14-13(20)15(26)19-16(18-14)17-8-4-2-6-11(22)23/h10H,2-9H2,1H3,(H3-,17,18,19,22,23,24,25,26)/p+1" 29R InChIKey InChI 1.03 SFCJOCVKLRCOMS-UHFFFAOYSA-O 29R SMILES_CANONICAL CACTVS 3.385 "Cn1c[n+](CCCCC(O)=O)c2N=C(NCCCCC(O)=O)NC(=O)c12" 29R SMILES CACTVS 3.385 "Cn1c[n+](CCCCC(O)=O)c2N=C(NCCCCC(O)=O)NC(=O)c12" 29R SMILES_CANONICAL "OpenEye OEToolkits" 1.9.2 "Cn1c[n+](c2c1C(=O)NC(=N2)NCCCCC(=O)O)CCCCC(=O)O" 29R SMILES "OpenEye OEToolkits" 1.9.2 "Cn1c[n+](c2c1C(=O)NC(=N2)NCCCCC(=O)O)CCCCC(=O)O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 29R "SYSTEMATIC NAME" ACDLabs 12.01 "9-(4-carboxybutyl)-2-[(4-carboxybutyl)amino]-7-methyl-6-oxo-6,7-dihydro-1H-purin-9-ium" 29R "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.9.2 "5-[[7-methyl-6-oxidanylidene-9-(5-oxidanyl-5-oxidanylidene-pentyl)-1H-purin-9-ium-2-yl]amino]pentanoic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 29R "Create component" 2013-10-10 EBI 29R "Initial release" 2013-10-30 RCSB 29R "Modify descriptor" 2014-09-05 RCSB #