data_2AM # _chem_comp.id 2AM _chem_comp.name "ADENOSINE-2'-MONOPHOSPHATE" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C10 H14 N5 O7 P" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 1999-07-08 _chem_comp.pdbx_modified_date 2011-06-04 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 347.221 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 2AM _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details ? _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code ? _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 2AM P P P 0 1 N N N 19.667 13.828 1.377 2.609 -0.329 -0.368 P 2AM 1 2AM O1P O1P O 0 1 N N N 20.808 14.487 1.961 2.908 -1.522 -1.191 O1P 2AM 2 2AM O2P O2P O 0 1 N N N 19.730 12.384 1.818 3.972 0.473 -0.071 O2P 2AM 3 2AM O3P O3P O 0 1 N N N 18.382 14.473 1.214 1.943 -0.790 1.023 O3P 2AM 4 2AM "C5'" C5* C 0 1 N N N 24.232 14.379 -2.509 -2.109 -0.281 -4.124 "C5'" 2AM 5 2AM "O5'" O5* O 0 1 N N N 24.901 13.985 -1.285 -3.405 0.314 -4.199 "O5'" 2AM 6 2AM "C4'" C4* C 0 1 N N R 22.847 13.772 -2.521 -1.275 0.443 -3.066 "C4'" 2AM 7 2AM "O4'" O4* O 0 1 N N N 22.864 12.360 -2.088 -1.894 0.320 -1.767 "O4'" 2AM 8 2AM "C3'" C3* C 0 1 N N R 21.852 14.606 -1.631 0.105 -0.231 -2.910 "C3'" 2AM 9 2AM "O3'" O3* O 0 1 N N N 20.681 15.001 -2.377 1.096 0.475 -3.659 "O3'" 2AM 10 2AM "C2'" C2* C 0 1 N N R 21.483 13.452 -0.657 0.401 -0.139 -1.395 "C2'" 2AM 11 2AM "O2'" O2* O 0 1 N N N 20.163 13.628 -0.188 1.585 0.626 -1.162 "O2'" 2AM 12 2AM "C1'" C1* C 0 1 N N R 21.604 12.145 -1.411 -0.837 0.578 -0.816 "C1'" 2AM 13 2AM N9 N9 N 0 1 Y N N 21.751 10.903 -0.629 -1.183 0.021 0.493 N9 2AM 14 2AM C8 C8 C 0 1 Y N N 22.599 10.623 0.430 -2.005 -1.041 0.727 C8 2AM 15 2AM N7 N7 N 0 1 Y N N 22.632 9.342 0.756 -2.090 -1.265 2.006 N7 2AM 16 2AM C5 C5 C 0 1 Y N N 21.721 8.757 -0.105 -1.326 -0.366 2.673 C5 2AM 17 2AM C6 C6 C 0 1 Y N N 21.336 7.384 -0.121 -1.045 -0.121 4.027 C6 2AM 18 2AM N6 N6 N 0 1 N N N 21.648 6.534 0.752 -1.598 -0.911 5.020 N6 2AM 19 2AM N1 N1 N 0 1 Y N N 20.541 7.093 -1.220 -0.231 0.883 4.333 N1 2AM 20 2AM C2 C2 C 0 1 Y N N 20.158 8.070 -2.125 0.301 1.643 3.392 C2 2AM 21 2AM N3 N3 N 0 1 Y N N 20.448 9.403 -2.090 0.061 1.454 2.112 N3 2AM 22 2AM C4 C4 C 0 1 Y N N 21.380 9.644 -1.113 -0.740 0.473 1.710 C4 2AM 23 2AM HOP2 2HOP H 0 0 N N N 18.977 11.949 1.433 4.556 -0.133 0.404 HOP2 2AM 24 2AM HOP3 3HOP H 0 0 N N N 17.629 14.038 0.829 1.764 0.015 1.527 HOP3 2AM 25 2AM "H5'1" 1H5* H 0 0 N N N 24.214 15.485 -2.648 -1.615 -0.201 -5.093 "H5'1" 2AM 26 2AM "H5'2" 2H5* H 0 0 N N N 24.820 14.118 -3.419 -2.207 -1.332 -3.852 "H5'2" 2AM 27 2AM "HO5'" *HO5 H 0 0 N N N 25.771 14.366 -1.277 -3.897 -0.170 -4.875 "HO5'" 2AM 28 2AM "H4'" H4* H 0 1 N N N 22.487 13.802 -3.576 -1.155 1.493 -3.331 "H4'" 2AM 29 2AM "H3'" H3* H 0 1 N N N 22.247 15.554 -1.198 0.059 -1.273 -3.229 "H3'" 2AM 30 2AM "HO3'" *HO3 H 0 0 N N N 20.080 15.504 -1.839 0.826 0.435 -4.587 "HO3'" 2AM 31 2AM "H2'" H2* H 0 1 N N N 22.168 13.448 0.222 0.501 -1.135 -0.964 "H2'" 2AM 32 2AM "H1'" H1* H 0 1 N N N 20.672 11.967 -1.997 -0.653 1.649 -0.735 "H1'" 2AM 33 2AM H8 H8 H 0 1 N N N 23.204 11.366 0.974 -2.510 -1.613 -0.037 H8 2AM 34 2AM HN61 1HN6 H 0 0 N N N 21.372 5.551 0.740 -1.392 -0.734 5.951 HN61 2AM 35 2AM HN62 2HN6 H 0 0 N N N 21.345 6.912 1.649 -2.194 -1.639 4.784 HN62 2AM 36 2AM H2 H2 H 0 1 N N N 19.544 7.745 -2.982 0.957 2.449 3.685 H2 2AM 37 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 2AM P O1P DOUB N N 1 2AM P O2P SING N N 2 2AM P O3P SING N N 3 2AM P "O2'" SING N N 4 2AM O2P HOP2 SING N N 5 2AM O3P HOP3 SING N N 6 2AM "C5'" "O5'" SING N N 7 2AM "C5'" "C4'" SING N N 8 2AM "C5'" "H5'1" SING N N 9 2AM "C5'" "H5'2" SING N N 10 2AM "O5'" "HO5'" SING N N 11 2AM "C4'" "O4'" SING N N 12 2AM "C4'" "C3'" SING N N 13 2AM "C4'" "H4'" SING N N 14 2AM "O4'" "C1'" SING N N 15 2AM "C3'" "O3'" SING N N 16 2AM "C3'" "C2'" SING N N 17 2AM "C3'" "H3'" SING N N 18 2AM "O3'" "HO3'" SING N N 19 2AM "C2'" "O2'" SING N N 20 2AM "C2'" "C1'" SING N N 21 2AM "C2'" "H2'" SING N N 22 2AM "C1'" N9 SING N N 23 2AM "C1'" "H1'" SING N N 24 2AM N9 C8 SING Y N 25 2AM N9 C4 SING Y N 26 2AM C8 N7 DOUB Y N 27 2AM C8 H8 SING N N 28 2AM N7 C5 SING Y N 29 2AM C5 C6 SING Y N 30 2AM C5 C4 DOUB Y N 31 2AM C6 N6 SING N N 32 2AM C6 N1 DOUB Y N 33 2AM N6 HN61 SING N N 34 2AM N6 HN62 SING N N 35 2AM N1 C2 SING Y N 36 2AM C2 N3 DOUB Y N 37 2AM C2 H2 SING N N 38 2AM N3 C4 SING Y N 39 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 2AM SMILES ACDLabs 10.04 "O=P(O)(O)OC3C(O)C(OC3n2cnc1c(ncnc12)N)CO" 2AM SMILES_CANONICAL CACTVS 3.341 "Nc1ncnc2n(cnc12)[C@@H]3O[C@H](CO)[C@@H](O)[C@H]3O[P](O)(O)=O" 2AM SMILES CACTVS 3.341 "Nc1ncnc2n(cnc12)[CH]3O[CH](CO)[CH](O)[CH]3O[P](O)(O)=O" 2AM SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "c1nc(c2c(n1)n(cn2)[C@H]3[C@@H]([C@@H]([C@H](O3)CO)O)OP(=O)(O)O)N" 2AM SMILES "OpenEye OEToolkits" 1.5.0 "c1nc(c2c(n1)n(cn2)C3C(C(C(O3)CO)O)OP(=O)(O)O)N" 2AM InChI InChI 1.03 "InChI=1S/C10H14N5O7P/c11-8-5-9(13-2-12-8)15(3-14-5)10-7(22-23(18,19)20)6(17)4(1-16)21-10/h2-4,6-7,10,16-17H,1H2,(H2,11,12,13)(H2,18,19,20)/t4-,6-,7-,10-/m1/s1" 2AM InChIKey InChI 1.03 QDFHPFSBQFLLSW-KQYNXXCUSA-N # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 2AM "SYSTEMATIC NAME" ACDLabs 10.04 ;2'-adenylic acid ; 2AM "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "[(2R,3R,4R,5R)-2-(6-aminopurin-9-yl)-4-hydroxy-5-(hydroxymethyl)oxolan-3-yl] dihydrogen phosphate" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 2AM "Create component" 1999-07-08 RCSB 2AM "Modify descriptor" 2011-06-04 RCSB #