data_2H0 # _chem_comp.id 2H0 _chem_comp.name "P-((((benzyloxy)carbonyl)amino)methyl)-N-((S)-1-(isopentylamino)-4-methyl-1-oxopentan-2-yl)phosphonamidic acid" _chem_comp.type peptide-like _chem_comp.pdbx_type HETAIN _chem_comp.formula "C20 H34 N3 O5 P" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "N~2~-[(S)-({[(benzyloxy)carbonyl]amino}methyl)(hydroxy)phosphoryl]-N-(3-methylbutyl)-L-leucinamide" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2013-10-17 _chem_comp.pdbx_modified_date 2021-03-01 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 427.475 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 2H0 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 4N5P _chem_comp.pdbx_subcomponent_list "PHQ PGL LEU LEN" _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 2H0 C4 C4 C 0 1 N N N 13.649 -41.658 10.855 -5.372 -1.324 0.278 C4 PHQ 1 2H0 C5 C5 C 0 1 Y N N 15.015 -41.203 11.393 -6.723 -1.069 -0.339 C5 PHQ 2 2H0 C6 C6 C 0 1 Y N N 16.166 -41.327 10.607 -7.832 -0.904 0.470 C6 PHQ 3 2H0 C7 C7 C 0 1 Y N N 17.407 -40.920 11.103 -9.071 -0.669 -0.095 C7 PHQ 4 2H0 C8 C8 C 0 1 Y N N 17.512 -40.372 12.388 -9.202 -0.599 -1.470 C8 PHQ 5 2H0 C9 C9 C 0 1 Y N N 16.361 -40.245 13.175 -8.093 -0.762 -2.279 C9 PHQ 6 2H0 C10 C10 C 0 1 Y N N 15.121 -40.661 12.679 -6.853 -0.993 -1.713 C10 PHQ 7 2H0 C3 C3 C 0 1 N N N 12.901 -40.796 8.748 -3.480 -0.111 1.081 C3 PHQ 8 2H0 O21 O21 O 0 1 N N N 13.669 -41.602 8.229 -2.980 -1.186 1.347 O21 PHQ 9 2H0 O4 O4 O 0 1 N N N 13.029 -40.628 10.068 -4.707 -0.058 0.528 O4 PHQ 10 2H0 N2 N2 N 0 1 N N N 12.072 -40.002 8.039 -2.808 1.028 1.339 N PGL 11 2H0 C22 C22 C 0 1 N N N 11.988 -40.113 6.599 -1.473 0.971 1.941 C PGL 12 2H0 P P P 0 1 N N N 11.508 -38.473 5.953 -0.211 1.037 0.627 P PGL 13 2H0 O2 O2 O 0 1 N N N 12.592 -37.478 6.198 -0.356 2.298 -0.133 O1 PGL 14 2H0 O3 O3 O 0 1 N N N 10.179 -38.062 6.521 -0.406 -0.214 -0.367 O3 PGL 15 2H0 N N N 0 1 N N N 11.327 -38.853 4.192 1.322 0.971 1.318 N LEU 16 2H0 C2 C2 C 0 1 N N S 10.092 -38.391 3.569 2.363 0.906 0.284 CA LEU 17 2H0 C21 C21 C 0 1 N N N 8.922 -39.303 3.861 3.500 0.043 0.768 C LEU 18 2H0 O1 O1 O 0 1 N N N 7.783 -38.842 3.869 3.575 -0.259 1.941 O LEU 19 2H0 C23 C23 C 0 1 N N N 10.415 -38.419 2.062 2.882 2.316 -0.006 CB LEU 20 2H0 C24 C24 C 0 1 N N N 9.292 -37.884 1.157 3.864 2.267 -1.178 CG LEU 21 2H0 C25 C25 C 0 1 N N N 9.123 -36.350 1.295 3.114 1.887 -2.456 CD1 LEU 22 2H0 C26 C26 C 0 1 N N N 9.556 -38.297 -0.312 4.513 3.641 -1.357 CD2 LEU 23 2H0 C31 C31 C 0 1 N N N 9.295 -42.137 1.247 8.334 -3.056 -1.557 CD2 LEN 24 2H0 C29 C29 C 0 1 N N N 8.401 -42.979 2.199 7.486 -2.623 -0.358 CG LEN 25 2H0 C30 C30 C 0 1 N N N 7.590 -44.019 1.374 8.378 -1.928 0.672 CD1 LEN 26 2H0 C28 C28 C 0 1 N N N 7.493 -42.034 3.039 6.398 -1.656 -0.826 CB LEN 27 2H0 C27 C27 C 0 1 N N N 8.131 -41.554 4.371 5.475 -1.320 0.347 CA LEN 28 2H0 N21 N21 N 0 1 N N N 9.202 -40.603 4.084 4.432 -0.394 -0.101 N LEN 29 2H0 H16 H16 H 0 1 N N N 12.994 -41.904 11.703 -5.497 -1.861 1.218 H16 PHQ 30 2H0 H17 H17 H 0 1 N N N 13.790 -42.551 10.229 -4.769 -1.923 -0.405 H17 PHQ 31 2H0 H18 H18 H 0 1 N N N 16.095 -41.740 9.611 -7.730 -0.959 1.544 H18 PHQ 32 2H0 H19 H19 H 0 1 N N N 18.291 -41.029 10.492 -9.938 -0.541 0.536 H19 PHQ 33 2H0 H20 H20 H 0 1 N N N 18.471 -40.051 12.768 -10.170 -0.416 -1.912 H20 PHQ 34 2H0 H21 H21 H 0 1 N N N 16.431 -39.825 14.167 -8.195 -0.708 -3.352 H21 PHQ 35 2H0 H22 H22 H 0 1 N N N 14.238 -40.563 13.293 -5.985 -1.117 -2.345 H22 PHQ 36 2H0 H23 H23 H 0 1 N N N 11.508 -39.328 8.515 -3.208 1.886 1.127 HN1 PGL 37 2H0 H14 H14 H 0 1 N N N 11.231 -40.862 6.323 -1.342 1.817 2.614 H1 PGL 38 2H0 H15 H15 H 0 1 N N N 12.964 -40.409 6.187 -1.367 0.041 2.501 H2 PGL 39 2H0 H13 H13 H 0 1 N N N 10.264 -37.218 6.948 -0.324 -1.076 0.064 H6 PGL 40 2H0 H1 H1 H 0 1 N N N 11.372 -39.846 4.086 1.398 0.193 1.957 H LEU 41 2H0 H2 H2 H 0 1 N N N 9.857 -37.362 3.879 1.945 0.478 -0.627 HA LEU 42 2H0 H3 H3 H 0 1 N N N 10.621 -39.461 1.774 2.044 2.966 -0.261 HB2 LEU 43 2H0 H4 H4 H 0 1 N N N 11.313 -37.807 1.892 3.389 2.706 0.877 HB3 LEU 44 2H0 H5 H5 H 0 1 N N N 8.350 -38.355 1.474 4.635 1.524 -0.975 HG LEU 45 2H0 H6 H6 H 0 1 N N N 8.938 -36.094 2.349 3.825 1.779 -3.276 HD11 LEU 46 2H0 H7 H7 H 0 1 N N N 10.040 -35.848 0.952 2.591 0.943 -2.303 HD12 LEU 47 2H0 H8 H8 H 0 1 N N N 8.272 -36.018 0.682 2.393 2.667 -2.701 HD13 LEU 48 2H0 H9 H9 H 0 1 N N N 9.670 -39.389 -0.371 3.742 4.384 -1.561 HD21 LEU 49 2H0 H10 H10 H 0 1 N N N 8.709 -37.983 -0.939 5.047 3.912 -0.447 HD22 LEU 50 2H0 H11 H11 H 0 1 N N N 10.476 -37.812 -0.669 5.213 3.606 -2.192 HD23 LEU 51 2H0 H32 H32 H 0 1 N N N 9.867 -41.403 1.834 8.797 -2.179 -2.010 HD21 LEN 52 2H0 H33 H33 H 0 1 N N N 9.991 -42.802 0.714 9.109 -3.745 -1.223 HD22 LEN 53 2H0 H34 H34 H 0 1 N N N 8.661 -41.610 0.519 7.698 -3.551 -2.291 HD23 LEN 54 2H0 H28 H28 H 0 1 N N N 9.058 -43.527 2.891 7.023 -3.500 0.095 HG LEN 55 2H0 H29 H29 H 0 1 N N N 6.959 -44.613 2.051 8.841 -1.051 0.219 HD11 LEN 56 2H0 H30 H30 H 0 1 N N N 6.954 -43.494 0.646 7.775 -1.620 1.526 HD12 LEN 57 2H0 H31 H31 H 0 1 N N N 8.284 -44.686 0.841 9.154 -2.617 1.006 HD13 LEN 58 2H0 H26 H26 H 0 1 N N N 7.260 -41.148 2.430 6.860 -0.741 -1.198 HB1 LEN 59 2H0 H27 H27 H 0 1 N N N 6.563 -42.571 3.276 5.817 -2.120 -1.624 HB2 LEN 60 2H0 H24 H24 H 0 1 N N N 7.364 -41.066 4.990 5.013 -2.235 0.719 HA1 LEN 61 2H0 H25 H25 H 0 1 N N N 8.544 -42.418 4.912 6.055 -0.856 1.145 HA2 LEN 62 2H0 H12 H12 H 0 1 N N N 10.150 -40.919 4.053 4.413 -0.094 -1.023 HN1 LEN 63 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 2H0 C26 C24 SING N N 1 2H0 C24 C25 SING N N 2 2H0 C24 C23 SING N N 3 2H0 C31 C29 SING N N 4 2H0 C30 C29 SING N N 5 2H0 C23 C2 SING N N 6 2H0 C29 C28 SING N N 7 2H0 C28 C27 SING N N 8 2H0 C2 C21 SING N N 9 2H0 C2 N SING N N 10 2H0 C21 O1 DOUB N N 11 2H0 C21 N21 SING N N 12 2H0 N21 C27 SING N N 13 2H0 N P SING N N 14 2H0 P O2 DOUB N N 15 2H0 P O3 SING N N 16 2H0 P C22 SING N N 17 2H0 C22 N2 SING N N 18 2H0 N2 C3 SING N N 19 2H0 O21 C3 DOUB N N 20 2H0 C3 O4 SING N N 21 2H0 O4 C4 SING N N 22 2H0 C6 C7 DOUB Y N 23 2H0 C6 C5 SING Y N 24 2H0 C4 C5 SING N N 25 2H0 C7 C8 SING Y N 26 2H0 C5 C10 DOUB Y N 27 2H0 C8 C9 DOUB Y N 28 2H0 C10 C9 SING Y N 29 2H0 N H1 SING N N 30 2H0 C2 H2 SING N N 31 2H0 C23 H3 SING N N 32 2H0 C23 H4 SING N N 33 2H0 C24 H5 SING N N 34 2H0 C25 H6 SING N N 35 2H0 C25 H7 SING N N 36 2H0 C25 H8 SING N N 37 2H0 C26 H9 SING N N 38 2H0 C26 H10 SING N N 39 2H0 C26 H11 SING N N 40 2H0 N21 H12 SING N N 41 2H0 O3 H13 SING N N 42 2H0 C22 H14 SING N N 43 2H0 C22 H15 SING N N 44 2H0 C4 H16 SING N N 45 2H0 C4 H17 SING N N 46 2H0 C6 H18 SING N N 47 2H0 C7 H19 SING N N 48 2H0 C8 H20 SING N N 49 2H0 C9 H21 SING N N 50 2H0 C10 H22 SING N N 51 2H0 N2 H23 SING N N 52 2H0 C27 H24 SING N N 53 2H0 C27 H25 SING N N 54 2H0 C28 H26 SING N N 55 2H0 C28 H27 SING N N 56 2H0 C29 H28 SING N N 57 2H0 C30 H29 SING N N 58 2H0 C30 H30 SING N N 59 2H0 C30 H31 SING N N 60 2H0 C31 H32 SING N N 61 2H0 C31 H33 SING N N 62 2H0 C31 H34 SING N N 63 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 2H0 SMILES ACDLabs 12.01 "O=C(NCCC(C)C)C(NP(=O)(O)CNC(=O)OCc1ccccc1)CC(C)C" 2H0 InChI InChI 1.03 "InChI=1S/C20H34N3O5P/c1-15(2)10-11-21-19(24)18(12-16(3)4)23-29(26,27)14-22-20(25)28-13-17-8-6-5-7-9-17/h5-9,15-16,18H,10-14H2,1-4H3,(H,21,24)(H,22,25)(H2,23,26,27)/t18-/m0/s1" 2H0 InChIKey InChI 1.03 HVPXEVZYFZOOTH-SFHVURJKSA-N 2H0 SMILES_CANONICAL CACTVS 3.385 "CC(C)CCNC(=O)[C@H](CC(C)C)N[P](O)(=O)CNC(=O)OCc1ccccc1" 2H0 SMILES CACTVS 3.385 "CC(C)CCNC(=O)[CH](CC(C)C)N[P](O)(=O)CNC(=O)OCc1ccccc1" 2H0 SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "CC(C)CCNC(=O)[C@H](CC(C)C)NP(=O)(CNC(=O)OCc1ccccc1)O" 2H0 SMILES "OpenEye OEToolkits" 1.7.6 "CC(C)CCNC(=O)C(CC(C)C)NP(=O)(CNC(=O)OCc1ccccc1)O" # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 2H0 "SYSTEMATIC NAME" ACDLabs 12.01 "N~2~-[(S)-({[(benzyloxy)carbonyl]amino}methyl)(hydroxy)phosphoryl]-N-(3-methylbutyl)-L-leucinamide" 2H0 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "N-[(2S)-4-methyl-1-(3-methylbutylamino)-1-oxidanylidene-pentan-2-yl]-(phenylmethoxycarbonylaminomethyl)phosphonamidic acid" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 2H0 "Create component" 2013-10-17 RCSB 2H0 "Modify synonyms" 2013-11-12 RCSB 2H0 "Initial release" 2014-04-02 RCSB 2H0 "Modify synonyms" 2021-03-01 PDBE # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id 2H0 _pdbx_chem_comp_synonyms.name "N~2~-[(S)-({[(benzyloxy)carbonyl]amino}methyl)(hydroxy)phosphoryl]-N-(3-methylbutyl)-L-leucinamide" _pdbx_chem_comp_synonyms.provenance ? _pdbx_chem_comp_synonyms.type ? ##