data_2H5 # _chem_comp.id 2H5 _chem_comp.name 3-deoxy-3-fluoro-beta-D-galactopyranose _chem_comp.type "D-saccharide, beta linking" _chem_comp.pdbx_type ATOMS _chem_comp.formula "C6 H11 F O5" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "3-deoxy-3-fluoro-beta-D-galactose; 3-deoxy-3-fluoro-D-galactose; 3-deoxy-3-fluoro-galactose" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2013-10-18 _chem_comp.pdbx_modified_date 2020-07-17 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 182.147 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 2H5 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 4MOM _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _pdbx_chem_comp_synonyms.ordinal _pdbx_chem_comp_synonyms.comp_id _pdbx_chem_comp_synonyms.name _pdbx_chem_comp_synonyms.provenance _pdbx_chem_comp_synonyms.type 1 2H5 3-deoxy-3-fluoro-beta-D-galactose PDB ? 2 2H5 3-deoxy-3-fluoro-D-galactose PDB ? 3 2H5 3-deoxy-3-fluoro-galactose PDB ? # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 2H5 C2 C2 C 0 1 N N S 31.567 49.586 122.987 -1.501 -0.350 0.137 C2 2H5 1 2H5 C6 C6 C 0 1 N N N 30.559 46.751 119.900 2.678 0.542 0.011 C6 2H5 2 2H5 C3 C3 C 0 1 N N S 32.749 49.149 122.130 -1.105 0.947 -0.574 C3 2H5 3 2H5 C4 C4 C 0 1 N N S 32.430 47.801 121.440 0.314 1.337 -0.147 C4 2H5 4 2H5 C5 C5 C 0 1 N N R 31.109 47.982 120.635 1.269 0.185 -0.467 C5 2H5 5 2H5 C1 C1 C 0 1 N N R 30.226 49.570 122.219 -0.476 -1.438 -0.192 C1 2H5 6 2H5 O1 O1 O 0 1 N Y N 29.117 49.760 123.104 -0.809 -2.636 0.514 O1 2H5 7 2H5 O2 O2 O 0 1 N N N 31.810 50.798 123.723 -2.795 -0.762 -0.308 O2 2H5 8 2H5 F3 F3 F 0 1 N N N 33.790 49.007 123.013 -1.996 1.966 -0.220 F3 2H5 9 2H5 O4 O4 O 0 1 N N N 32.174 46.795 122.428 0.335 1.600 1.257 O4 2H5 10 2H5 O5 O5 O 0 1 N N N 30.055 48.314 121.533 0.826 -0.999 0.201 O5 2H5 11 2H5 O6 O6 O 0 1 N N N 29.400 47.161 119.195 3.591 -0.481 -0.390 O6 2H5 12 2H5 H2 H1 H 0 1 N N N 31.462 48.795 123.744 -1.523 -0.183 1.214 H2 2H5 13 2H5 H61 H2 H 0 1 N N N 30.300 45.965 120.625 2.981 1.492 -0.429 H61 2H5 14 2H5 H62 H3 H 0 1 N N N 31.311 46.367 119.196 2.682 0.628 1.098 H62 2H5 15 2H5 H3 H4 H 0 1 N N N 32.957 49.912 121.365 -1.134 0.796 -1.653 H3 2H5 16 2H5 H4 H5 H 0 1 N N N 33.249 47.515 120.764 0.625 2.230 -0.690 H4 2H5 17 2H5 H5 H6 H 0 1 N N N 31.255 48.792 119.905 1.283 0.012 -1.543 H5 2H5 18 2H5 H1 H7 H 0 1 N N N 30.249 50.386 121.482 -0.485 -1.634 -1.264 H1 2H5 19 2H5 HO1 H8 H 0 1 N Y N 29.216 50.585 123.564 -0.200 -3.369 0.352 HO1 2H5 20 2H5 HO2 H9 H 0 1 N Y N 31.041 51.018 124.235 -3.109 -1.581 0.100 HO2 2H5 21 2H5 HO4 H10 H 0 1 N Y N 32.958 46.652 122.945 -0.252 2.318 1.532 HO4 2H5 22 2H5 HO6 H11 H 0 1 N N N 29.034 46.419 118.728 4.506 -0.320 -0.120 HO6 2H5 23 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 2H5 O6 C6 SING N N 1 2H5 C6 C5 SING N N 2 2H5 C5 C4 SING N N 3 2H5 C5 O5 SING N N 4 2H5 C4 C3 SING N N 5 2H5 C4 O4 SING N N 6 2H5 O5 C1 SING N N 7 2H5 C3 C2 SING N N 8 2H5 C3 F3 SING N N 9 2H5 C1 C2 SING N N 10 2H5 C1 O1 SING N N 11 2H5 C2 O2 SING N N 12 2H5 C2 H2 SING N N 13 2H5 C6 H61 SING N N 14 2H5 C6 H62 SING N N 15 2H5 C3 H3 SING N N 16 2H5 C4 H4 SING N N 17 2H5 C5 H5 SING N N 18 2H5 C1 H1 SING N N 19 2H5 O1 HO1 SING N N 20 2H5 O2 HO2 SING N N 21 2H5 O4 HO4 SING N N 22 2H5 O6 HO6 SING N N 23 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 2H5 SMILES ACDLabs 12.01 "FC1C(O)C(OC(O)C1O)CO" 2H5 InChI InChI 1.03 "InChI=1S/C6H11FO5/c7-3-4(9)2(1-8)12-6(11)5(3)10/h2-6,8-11H,1H2/t2-,3+,4+,5-,6-/m1/s1" 2H5 InChIKey InChI 1.03 BUMRBAMACDBPKO-FPRJBGLDSA-N 2H5 SMILES_CANONICAL CACTVS 3.385 "OC[C@H]1O[C@@H](O)[C@H](O)[C@@H](F)[C@H]1O" 2H5 SMILES CACTVS 3.385 "OC[CH]1O[CH](O)[CH](O)[CH](F)[CH]1O" 2H5 SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "C([C@@H]1[C@@H]([C@@H]([C@H]([C@@H](O1)O)O)F)O)O" 2H5 SMILES "OpenEye OEToolkits" 1.7.6 "C(C1C(C(C(C(O1)O)O)F)O)O" # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 2H5 "SYSTEMATIC NAME" ACDLabs 12.01 3-deoxy-3-fluoro-beta-D-galactopyranose 2H5 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "(2R,3S,4S,5S,6R)-4-fluoranyl-6-(hydroxymethyl)oxane-2,3,5-triol" 2H5 "IUPAC CARBOHYDRATE SYMBOL" PDB-CARE 1.0 b-D-Galp3fluoro # # loop_ _pdbx_chem_comp_feature.comp_id _pdbx_chem_comp_feature.type _pdbx_chem_comp_feature.value _pdbx_chem_comp_feature.source _pdbx_chem_comp_feature.support 2H5 "CARBOHYDRATE ISOMER" D PDB ? 2H5 "CARBOHYDRATE RING" pyranose PDB ? 2H5 "CARBOHYDRATE ANOMER" beta PDB ? 2H5 "CARBOHYDRATE PRIMARY CARBONYL GROUP" aldose PDB ? # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 2H5 "Create component" 2013-10-18 RCSB 2H5 "Initial release" 2014-02-05 RCSB 2H5 "Other modification" 2020-07-03 RCSB 2H5 "Modify synonyms" 2020-07-17 RCSB 2H5 "Modify internal type" 2020-07-17 RCSB 2H5 "Modify linking type" 2020-07-17 RCSB 2H5 "Modify atom id" 2020-07-17 RCSB 2H5 "Modify component atom id" 2020-07-17 RCSB 2H5 "Modify leaving atom flag" 2020-07-17 RCSB ##