data_2IE # _chem_comp.id 2IE _chem_comp.name "2-(4-phenoxyphenoxy)-5-[(3R)-1-(prop-2-enoyl)piperidin-3-yl]pyridine-3-carboxamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C26 H27 N3 O4" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2021-06-28 _chem_comp.pdbx_modified_date 2024-09-27 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 445.510 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 2IE _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7R60 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm Y # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 2IE C2 C1 C 0 1 Y N N N N N -17.171 6.001 3.470 0.092 1.900 -0.008 C2 2IE 1 2IE C3 C2 C 0 1 Y N N N N N -17.187 5.939 1.977 -1.005 2.640 0.461 C3 2IE 2 2IE C8 C3 C 0 1 N N N N N N -18.339 5.293 1.243 -0.803 3.936 1.136 C8 2IE 3 2IE C11 C4 C 0 1 Y N N N N N -18.328 5.711 5.607 2.388 1.592 -0.224 C11 2IE 4 2IE C12 C5 C 0 1 Y N N N N N -18.344 4.658 6.541 3.148 0.938 0.735 C12 2IE 5 2IE C13 C6 C 0 1 Y N N N N N -18.548 4.906 7.907 4.201 0.132 0.349 C13 2IE 6 2IE C14 C7 C 0 1 Y N N N N N -18.744 6.211 8.354 4.498 -0.024 -0.997 C14 2IE 7 2IE C15 C8 C 0 1 Y N N N N N -18.725 7.264 7.431 3.738 0.630 -1.956 C15 2IE 8 2IE C16 C9 C 0 1 Y N N N N N -18.526 7.012 6.078 2.685 1.436 -1.570 C16 2IE 9 2IE O17 O1 O 0 1 N N N N N N -18.951 6.467 9.697 5.535 -0.817 -1.377 O17 2IE 10 2IE C19 C10 C 0 1 Y N N N N N -21.102 7.518 9.405 5.512 -2.572 0.229 C19 2IE 11 2IE C20 C11 C 0 1 Y N N N N N -22.111 8.344 9.898 6.162 -3.303 1.205 C20 2IE 12 2IE C21 C12 C 0 1 Y N N N N N -21.996 8.919 11.159 7.470 -3.003 1.538 C21 2IE 13 2IE C22 C13 C 0 1 Y N N N N N -20.854 8.699 11.924 8.131 -1.972 0.895 C22 2IE 14 2IE C24 C14 C 0 1 N N R N N N -13.861 7.737 1.398 -3.796 0.313 -0.587 C24 2IE 15 2IE N26 N1 N 0 1 N N N N N N -13.080 9.778 0.263 -5.172 -1.668 -0.220 N26 2IE 16 2IE C27 C15 C 0 1 N N N N N N -12.624 9.067 -0.925 -5.540 -1.814 -1.635 C27 2IE 17 2IE C30 C16 C 0 1 N N N N N N -12.571 10.952 0.723 -6.000 -2.096 0.753 C30 2IE 18 2IE C32 C17 C 0 1 N N N N N N -11.730 11.838 -0.167 -7.319 -2.732 0.395 C32 2IE 19 2IE C33 C18 C 0 1 N N N N N N -12.250 13.288 -0.030 -8.060 -3.124 1.674 C33 2IE 20 2IE N1 N2 N 0 1 Y N N N N N -16.138 6.592 4.094 -0.093 0.739 -0.613 N1 2IE 21 2IE C4 C19 C 0 1 Y N N N N N -16.098 6.502 1.285 -2.293 2.126 0.275 C4 2IE 22 2IE C5 C20 C 0 1 Y N N N N N -15.059 7.102 2.020 -2.428 0.907 -0.365 C5 2IE 23 2IE C6 C21 C 0 1 Y N N N N N -15.127 7.129 3.402 -1.298 0.235 -0.794 C6 2IE 24 2IE O7 O2 O 0 1 N N N N N N -18.155 5.474 4.246 1.348 2.381 0.156 O7 2IE 25 2IE O9 O3 O 0 1 N N N N N N -18.261 4.967 0.063 0.322 4.372 1.291 O9 2IE 26 2IE N10 N3 N 0 1 N N N N N N -19.544 5.068 1.936 -1.865 4.636 1.582 N10 2IE 27 2IE C18 C22 C 0 1 Y N N N N N -19.968 7.281 10.168 6.173 -1.537 -0.417 C18 2IE 28 2IE C23 C23 C 0 1 Y N N N N N -19.846 7.876 11.425 7.485 -1.239 -0.081 C23 2IE 29 2IE C25 C24 C 0 1 N N N N N N -14.222 9.151 0.935 -3.883 -1.046 0.114 C25 2IE 30 2IE C28 C25 C 0 1 N N N N N N -12.156 7.683 -0.455 -5.435 -0.445 -2.316 C28 2IE 31 2IE C29 C26 C 0 1 N N N N N N -13.311 6.937 0.210 -4.034 0.126 -2.087 C29 2IE 32 2IE O31 O4 O 0 1 N N N N N N -12.794 11.389 1.849 -5.685 -1.969 1.918 O31 2IE 33 2IE H1 H1 H 0 1 N N N N N N -18.197 3.644 6.201 2.917 1.059 1.783 H1 2IE 34 2IE H2 H2 H 0 1 N N N N N N -18.553 4.087 8.611 4.793 -0.377 1.095 H2 2IE 35 2IE H3 H3 H 0 1 N N N N N N -18.866 8.279 7.772 3.970 0.509 -3.004 H3 2IE 36 2IE H4 H4 H 0 1 N N N N N N -18.524 7.836 5.379 2.093 1.945 -2.316 H4 2IE 37 2IE H5 H5 H 0 1 N N N N N N -21.203 7.063 8.431 4.491 -2.809 -0.033 H5 2IE 38 2IE H6 H6 H 0 1 N N N N N N -22.987 8.538 9.297 5.648 -4.108 1.708 H6 2IE 39 2IE H7 H7 H 0 1 N N N N N N -22.793 9.537 11.545 7.977 -3.576 2.301 H7 2IE 40 2IE H8 H8 H 0 1 N N N N N N -20.750 9.161 12.894 9.153 -1.740 1.158 H8 2IE 41 2IE H9 H9 H 0 1 N N N N N N -13.068 7.815 2.157 -4.553 0.982 -0.179 H9 2IE 42 2IE H10 H10 H 0 1 N N N N N N -11.791 9.610 -1.396 -4.862 -2.517 -2.118 H10 2IE 43 2IE H11 H11 H 0 1 N N N N N N -13.449 8.964 -1.646 -6.564 -2.181 -1.709 H11 2IE 44 2IE H12 H12 H 0 1 N N N N N N -11.818 11.507 -1.212 -7.922 -2.022 -0.172 H12 2IE 45 2IE H14 H14 H 0 1 N N N N N N -11.653 13.954 -0.670 -7.457 -3.833 2.241 H14 2IE 46 2IE H15 H15 H 0 1 N N N N N N -13.304 13.330 -0.340 -8.238 -2.234 2.279 H15 2IE 47 2IE H17 H17 H 0 1 N N N N N N -16.061 6.474 0.206 -3.160 2.668 0.623 H17 2IE 48 2IE H18 H18 H 0 1 N N N N N N -14.326 7.606 3.947 -1.405 -0.719 -1.290 H18 2IE 49 2IE H19 H19 H 0 1 N N N N N N -20.320 4.648 1.466 -2.761 4.288 1.458 H19 2IE 50 2IE H20 H20 H 0 1 N N N N N N -19.623 5.328 2.898 -1.732 5.488 2.026 H20 2IE 51 2IE H21 H21 H 0 1 N N N N N N -18.961 7.697 12.017 8.002 -0.433 -0.582 H21 2IE 52 2IE H22 H22 H 0 1 N N N N N N -14.505 9.757 1.808 -3.069 -1.686 -0.227 H22 2IE 53 2IE H23 H23 H 0 1 N N N N N N -15.069 9.098 0.235 -3.813 -0.906 1.193 H23 2IE 54 2IE H24 H24 H 0 1 N N N N N N -11.800 7.106 -1.321 -5.612 -0.557 -3.385 H24 2IE 55 2IE H25 H25 H 0 1 N N N N N N -11.336 7.802 0.268 -6.177 0.230 -1.892 H25 2IE 56 2IE H26 H26 H 0 1 N N N N N N -14.114 6.785 -0.526 -3.948 1.089 -2.591 H26 2IE 57 2IE H27 H27 H 0 1 N N N N N N -12.952 5.961 0.567 -3.290 -0.562 -2.490 H27 2IE 58 2IE H13 H13 H 0 1 N N N N N N -10.677 11.788 0.146 -7.141 -3.621 -0.209 H13 2IE 59 2IE H16 H16 H 0 1 N Y N N N N -12.163 13.611 1.018 -9.014 -3.584 1.415 H16 2IE 60 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 2IE C27 C28 SING N N 1 2IE C27 N26 SING N N 2 2IE C28 C29 SING N N 3 2IE C32 C33 SING N N 4 2IE C32 C30 SING N N 5 2IE O9 C8 DOUB N N 6 2IE C29 C24 SING N N 7 2IE N26 C30 SING N N 8 2IE N26 C25 SING N N 9 2IE C30 O31 DOUB N N 10 2IE C25 C24 SING N N 11 2IE C8 N10 SING N N 12 2IE C8 C3 SING N N 13 2IE C4 C3 DOUB Y N 14 2IE C4 C5 SING Y N 15 2IE C24 C5 SING N N 16 2IE C3 C2 SING Y N 17 2IE C5 C6 DOUB Y N 18 2IE C6 N1 SING Y N 19 2IE C2 N1 DOUB Y N 20 2IE C2 O7 SING N N 21 2IE O7 C11 SING N N 22 2IE C11 C16 DOUB Y N 23 2IE C11 C12 SING Y N 24 2IE C16 C15 SING Y N 25 2IE C12 C13 DOUB Y N 26 2IE C15 C14 DOUB Y N 27 2IE C13 C14 SING Y N 28 2IE C14 O17 SING N N 29 2IE C19 C20 DOUB Y N 30 2IE C19 C18 SING Y N 31 2IE O17 C18 SING N N 32 2IE C20 C21 SING Y N 33 2IE C18 C23 DOUB Y N 34 2IE C21 C22 DOUB Y N 35 2IE C23 C22 SING Y N 36 2IE C12 H1 SING N N 37 2IE C13 H2 SING N N 38 2IE C15 H3 SING N N 39 2IE C16 H4 SING N N 40 2IE C19 H5 SING N N 41 2IE C20 H6 SING N N 42 2IE C21 H7 SING N N 43 2IE C22 H8 SING N N 44 2IE C24 H9 SING N N 45 2IE C27 H10 SING N N 46 2IE C27 H11 SING N N 47 2IE C32 H12 SING N N 48 2IE C33 H14 SING N N 49 2IE C33 H15 SING N N 50 2IE C4 H17 SING N N 51 2IE C6 H18 SING N N 52 2IE N10 H19 SING N N 53 2IE N10 H20 SING N N 54 2IE C23 H21 SING N N 55 2IE C25 H22 SING N N 56 2IE C25 H23 SING N N 57 2IE C28 H24 SING N N 58 2IE C28 H25 SING N N 59 2IE C29 H26 SING N N 60 2IE C29 H27 SING N N 61 2IE C32 H13 SING N N 62 2IE C33 H16 SING N N 63 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 2IE SMILES ACDLabs 12.01 "O=C(CC)N1CCCC(C1)c1cc(C(N)=O)c(Oc2ccc(Oc3ccccc3)cc2)nc1" 2IE InChI InChI 1.03 "InChI=1S/C26H27N3O4/c1-2-24(30)29-14-6-7-18(17-29)19-15-23(25(27)31)26(28-16-19)33-22-12-10-21(11-13-22)32-20-8-4-3-5-9-20/h3-5,8-13,15-16,18H,2,6-7,14,17H2,1H3,(H2,27,31)/t18-/m0/s1" 2IE InChIKey InChI 1.03 KPAVXBRYORHPKS-SFHVURJKSA-N 2IE SMILES_CANONICAL CACTVS 3.385 "CCC(=O)N1CCC[C@@H](C1)c2cnc(Oc3ccc(Oc4ccccc4)cc3)c(c2)C(N)=O" 2IE SMILES CACTVS 3.385 "CCC(=O)N1CCC[CH](C1)c2cnc(Oc3ccc(Oc4ccccc4)cc3)c(c2)C(N)=O" 2IE SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CCC(=O)N1CCC[C@@H](C1)c2cc(c(nc2)Oc3ccc(cc3)Oc4ccccc4)C(=O)N" 2IE SMILES "OpenEye OEToolkits" 2.0.7 "CCC(=O)N1CCCC(C1)c2cc(c(nc2)Oc3ccc(cc3)Oc4ccccc4)C(=O)N" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 2IE "SYSTEMATIC NAME" ACDLabs 12.01 "2-(4-phenoxyphenoxy)-5-[(3R)-1-propanoylpiperidin-3-yl]pyridine-3-carboxamide" 2IE "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "2-(4-phenoxyphenoxy)-5-[(3~{R})-1-propanoylpiperidin-3-yl]pyridine-3-carboxamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 2IE "Create component" 2021-06-28 RCSB 2IE "Other modification" 2021-06-28 RCSB 2IE "Initial release" 2021-10-06 RCSB 2IE "Modify PCM" 2024-09-27 PDBE # _pdbx_chem_comp_pcm.pcm_id 1 _pdbx_chem_comp_pcm.comp_id 2IE _pdbx_chem_comp_pcm.modified_residue_id CYS _pdbx_chem_comp_pcm.type None _pdbx_chem_comp_pcm.category "Covalent chemical modification" _pdbx_chem_comp_pcm.position "Amino-acid side chain" _pdbx_chem_comp_pcm.polypeptide_position "Any position" _pdbx_chem_comp_pcm.comp_id_linking_atom C33 _pdbx_chem_comp_pcm.modified_residue_id_linking_atom SG _pdbx_chem_comp_pcm.uniprot_specific_ptm_accession ? _pdbx_chem_comp_pcm.uniprot_generic_ptm_accession ? #