data_2IO
#
_chem_comp.id 2IO
_chem_comp.name "(3S,6S)-3,6-bis(2-methylpropyl)piperazine-2,5-dione"
_chem_comp.type non-polymer
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C12 H22 N2 O2"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms "cyclo(L-Leu-L-Leu); Leucinimid; 2,5-Piperazinedione, 3,6-bis(2-methylpropyl); 137006"
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2021-06-17
_chem_comp.pdbx_modified_date 2021-08-20
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 226.315
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code 2IO
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 7OW9
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site PDBE
# #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
2IO C1 C1 C 0 1 N N N -17.892 -11.940 -4.103 -3.481 2.390 0.263 C1 2IO 1
2IO C10 C2 C 0 1 N N N -15.814 -17.409 -4.106 3.500 2.336 -0.523 C10 2IO 2
2IO C11 C3 C 0 1 N N N -16.304 -18.204 -6.429 4.279 0.041 0.082 C11 2IO 3
2IO C12 C4 C 0 1 N N N -20.500 -15.728 -4.033 -0.307 -1.095 -1.298 C12 2IO 4
2IO C2 C5 C 0 1 N N N -18.196 -13.426 -3.936 -3.092 0.914 0.370 C2 2IO 5
2IO C3 C6 C 0 1 N N N -18.235 -14.115 -5.281 -4.279 0.042 -0.043 C3 2IO 6
2IO C4 C7 C 0 1 N N N -19.487 -13.624 -3.148 -1.906 0.632 -0.555 C4 2IO 7
2IO C5 C8 C 0 1 N N S -19.854 -15.082 -2.820 -1.422 -0.804 -0.339 C5 2IO 8
2IO C6 C9 C 0 1 N N N -18.465 -17.131 -2.597 0.301 -0.939 1.402 C6 2IO 9
2IO C7 C10 C 0 1 N N S -19.121 -17.770 -3.806 1.416 -0.759 0.415 C7 2IO 10
2IO C8 C11 C 0 1 N N N -18.056 -18.457 -4.676 1.897 0.692 0.463 C8 2IO 11
2IO C9 C12 C 0 1 N N N -16.895 -17.595 -5.166 3.105 0.859 -0.461 C9 2IO 12
2IO N1 N1 N 0 1 N N N -18.715 -15.853 -2.339 -0.986 -0.958 1.042 N1 2IO 13
2IO N2 N2 N 0 1 N N N -19.931 -16.814 -4.546 0.980 -1.072 -0.939 N2 2IO 14
2IO O1 O1 O 0 1 N N N -17.635 -17.775 -1.951 0.579 -1.074 2.575 O1 2IO 15
2IO O2 O2 O 0 1 N N N -21.461 -15.173 -4.573 -0.585 -1.369 -2.447 O2 2IO 16
2IO H3 H1 H 0 1 N N N -17.868 -11.457 -3.115 -3.676 2.640 -0.780 H3 2IO 17
2IO H2 H2 H 0 1 N N N -16.915 -11.819 -4.594 -4.378 2.573 0.854 H2 2IO 18
2IO H1 H3 H 0 1 N N N -18.674 -11.473 -4.720 -2.666 3.009 0.639 H1 2IO 19
2IO H17 H4 H 0 1 N N N -16.259 -16.968 -3.201 2.637 2.930 -0.826 H17 2IO 20
2IO H16 H5 H 0 1 N N N -15.371 -18.385 -3.859 3.838 2.664 0.460 H16 2IO 21
2IO H18 H6 H 0 1 N N N -15.032 -16.739 -4.493 4.304 2.468 -1.246 H18 2IO 22
2IO H19 H7 H 0 1 N N N -15.468 -17.582 -6.780 3.998 -1.011 0.126 H19 2IO 23
2IO H20 H8 H 0 1 N N N -15.939 -19.219 -6.211 5.140 0.160 -0.576 H20 2IO 24
2IO H21 H9 H 0 1 N N N -17.078 -18.253 -7.209 4.535 0.391 1.082 H21 2IO 25
2IO H4 H10 H 0 1 N N N -17.377 -13.871 -3.353 -2.813 0.686 1.398 H4 2IO 26
2IO H6 H11 H 0 1 N N N -18.455 -15.183 -5.140 -4.557 0.271 -1.072 H6 2IO 27
2IO H5 H12 H 0 1 N N N -19.018 -13.659 -5.904 -4.002 -1.009 0.033 H5 2IO 28
2IO H7 H13 H 0 1 N N N -17.260 -14.004 -5.778 -5.124 0.243 0.616 H7 2IO 29
2IO H9 H14 H 0 1 N N N -19.390 -13.078 -2.198 -2.215 0.759 -1.592 H9 2IO 30
2IO H8 H15 H 0 1 N N N -20.311 -13.193 -3.736 -1.096 1.325 -0.329 H8 2IO 31
2IO H10 H16 H 0 1 N N N -20.610 -15.054 -2.021 -2.247 -1.491 -0.531 H10 2IO 32
2IO H12 H17 H 0 1 N N N -19.788 -18.561 -3.433 2.241 -1.418 0.686 H12 2IO 33
2IO H14 H18 H 0 1 N N N -18.564 -18.863 -5.563 1.094 1.352 0.134 H14 2IO 34
2IO H13 H19 H 0 1 N N N -17.630 -19.283 -4.087 2.182 0.948 1.484 H13 2IO 35
2IO H15 H20 H 0 1 N N N -17.294 -16.602 -5.422 2.850 0.509 -1.461 H15 2IO 36
2IO H11 H21 H 0 1 N N N -18.058 -15.373 -1.758 -1.658 -1.080 1.730 H11 2IO 37
2IO H22 H22 H 0 1 N N N -20.071 -16.989 -5.521 1.652 -1.271 -1.609 H22 2IO 38
# #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
2IO C11 C9 SING N N 1
2IO C3 C2 SING N N 2
2IO C9 C8 SING N N 3
2IO C9 C10 SING N N 4
2IO C8 C7 SING N N 5
2IO O2 C12 DOUB N N 6
2IO N2 C12 SING N N 7
2IO N2 C7 SING N N 8
2IO C1 C2 SING N N 9
2IO C12 C5 SING N N 10
2IO C2 C4 SING N N 11
2IO C7 C6 SING N N 12
2IO C4 C5 SING N N 13
2IO C5 N1 SING N N 14
2IO C6 N1 SING N N 15
2IO C6 O1 DOUB N N 16
2IO C1 H3 SING N N 17
2IO C1 H2 SING N N 18
2IO C1 H1 SING N N 19
2IO C10 H17 SING N N 20
2IO C10 H16 SING N N 21
2IO C10 H18 SING N N 22
2IO C11 H19 SING N N 23
2IO C11 H20 SING N N 24
2IO C11 H21 SING N N 25
2IO C2 H4 SING N N 26
2IO C3 H6 SING N N 27
2IO C3 H5 SING N N 28
2IO C3 H7 SING N N 29
2IO C4 H9 SING N N 30
2IO C4 H8 SING N N 31
2IO C5 H10 SING N N 32
2IO C7 H12 SING N N 33
2IO C8 H14 SING N N 34
2IO C8 H13 SING N N 35
2IO C9 H15 SING N N 36
2IO N1 H11 SING N N 37
2IO N2 H22 SING N N 38
# #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
2IO InChI InChI 1.03 "InChI=1S/C12H22N2O2/c1-7(2)5-9-11(15)14-10(6-8(3)4)12(16)13-9/h7-10H,5-6H2,1-4H3,(H,13,16)(H,14,15)/t9-,10-/m0/s1"
2IO InChIKey InChI 1.03 XWYXUMDVQIOAPR-UWVGGRQHSA-N
2IO SMILES_CANONICAL CACTVS 3.385 "CC(C)C[C@@H]1NC(=O)[C@H](CC(C)C)NC1=O"
2IO SMILES CACTVS 3.385 "CC(C)C[CH]1NC(=O)[CH](CC(C)C)NC1=O"
2IO SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC(C)C[C@H]1C(=O)N[C@H](C(=O)N1)CC(C)C"
2IO SMILES "OpenEye OEToolkits" 2.0.7 "CC(C)CC1C(=O)NC(C(=O)N1)CC(C)C"
#
_pdbx_chem_comp_identifier.comp_id 2IO
_pdbx_chem_comp_identifier.type "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version 2.0.7
_pdbx_chem_comp_identifier.identifier "(3~{S},6~{S})-3,6-bis(2-methylpropyl)piperazine-2,5-dione"
# #
loop_
_pdbx_chem_comp_synonyms.ordinal
_pdbx_chem_comp_synonyms.comp_id
_pdbx_chem_comp_synonyms.name
_pdbx_chem_comp_synonyms.provenance
_pdbx_chem_comp_synonyms.type
1 2IO "cyclo(L-Leu-L-Leu)" AUTHOR ?
2 2IO Leucinimid PUBCHEM ?
3 2IO "2,5-Piperazinedione, 3,6-bis(2-methylpropyl)" PUBCHEM ?
4 2IO 137006 PUBCHEM ?
# #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
2IO "Create component" 2021-06-17 PDBE
2IO "Initial release" 2021-08-25 RCSB
##