data_2JL # _chem_comp.id 2JL _chem_comp.name "(2S,3R)-1-(phenanthren-2-ylcarbonyl)piperazine-2,3-dicarboxylic acid" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C21 H18 N2 O5" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2013-10-31 _chem_comp.pdbx_modified_date 2014-03-07 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 378.378 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 2JL _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 4NF6 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 2JL N N N 0 1 N N N -8.789 15.716 -50.033 3.526 -0.711 1.822 N 2JL 1 2JL CA CA C 0 1 N N R -8.839 15.790 -51.514 3.905 0.456 1.015 CA 2JL 2 2JL CAF CAF C 0 1 Y N N 1.361 20.764 -49.737 -7.380 -0.040 0.566 CAF 2JL 3 2JL CAG CAG C 0 1 Y N N 0.621 21.626 -50.544 -6.835 1.237 0.608 CAG 2JL 4 2JL CAH CAH C 0 1 Y N N -4.604 19.930 -52.279 -1.306 1.897 -0.337 CAH 2JL 5 2JL CAI CAI C 0 1 Y N N 0.834 19.537 -49.373 -6.600 -1.128 0.302 CAI 2JL 6 2JL CAJ CAJ C 0 1 Y N N -0.649 21.251 -50.981 -5.502 1.435 0.384 CAJ 2JL 7 2JL CAK CAK C 0 1 Y N N -3.345 20.371 -51.874 -2.642 1.771 -0.105 CAK 2JL 8 2JL CAL CAL C 0 1 Y N N -0.952 17.903 -49.433 -4.396 -2.067 -0.216 CAL 2JL 9 2JL CAM CAM C 0 1 Y N N -2.211 17.492 -49.850 -3.077 -1.914 -0.448 CAM 2JL 10 2JL CAN CAN C 0 1 Y N N -4.262 17.884 -51.073 -1.092 -0.496 -0.649 CAN 2JL 11 2JL CAO CAO C 0 1 N N N -7.570 16.420 -49.511 2.075 -0.756 2.047 CAO 2JL 12 2JL CAP CAP C 0 1 N N N -7.462 17.794 -50.101 1.358 -0.919 0.702 CAP 2JL 13 2JL CAT CAT C 0 1 N N N -6.428 18.171 -52.310 0.930 0.925 -0.858 CAT 2JL 14 2JL CAU CAU C 0 1 Y N N -5.070 18.686 -51.864 -0.518 0.767 -0.608 CAU 2JL 15 2JL CAV CAV C 0 1 Y N N -0.446 19.161 -49.826 -5.229 -0.959 0.062 CAV 2JL 16 2JL CAW CAW C 0 1 Y N N -2.987 18.336 -50.668 -2.463 -0.640 -0.407 CAW 2JL 17 2JL CAX CAX C 0 1 Y N N -1.196 19.995 -50.623 -4.677 0.342 0.111 CAX 2JL 18 2JL CAY CAY C 0 1 Y N N -2.515 19.570 -51.055 -3.242 0.509 -0.135 CAY 2JL 19 2JL C C C 0 1 N N N -10.009 15.018 -52.015 5.404 0.505 0.873 C 2JL 20 2JL O O O 0 1 N N N -10.531 15.246 -53.138 6.061 -0.491 1.059 O 2JL 21 2JL NAZ NAZ N 0 1 N N N -7.572 17.741 -51.480 1.815 0.148 -0.202 NAZ 2JL 22 2JL OAC OAC O 0 1 N N N -6.555 18.092 -53.527 1.323 1.755 -1.654 OAC 2JL 23 2JL CB CB C 0 1 N N S -8.799 17.236 -51.947 3.263 0.344 -0.372 CB 2JL 24 2JL CG CG C 0 1 N N N -10.043 18.017 -51.525 3.850 -0.833 -1.108 CG 2JL 25 2JL OD1 OD1 O 0 1 N N N -10.163 19.216 -51.879 3.245 -1.878 -1.157 OD1 2JL 26 2JL OD2 OD2 O 0 1 N N N -10.953 17.496 -50.826 5.044 -0.720 -1.709 OD2 2JL 27 2JL OXT OXT O 0 1 N N N -10.494 14.100 -51.307 6.010 1.656 0.539 OXT 2JL 28 2JL H1 H1 H 0 1 N N N -9.607 16.150 -49.654 3.853 -1.566 1.397 H1 2JL 29 2JL H3 H3 H 0 1 N N N -7.931 15.306 -51.903 3.556 1.365 1.504 H3 2JL 30 2JL H4 H4 H 0 1 N N N 2.344 21.053 -49.396 -8.436 -0.175 0.749 H4 2JL 31 2JL H5 H5 H 0 1 N N N 1.031 22.583 -50.831 -7.472 2.083 0.818 H5 2JL 32 2JL H6 H6 H 0 1 N N N -5.217 20.553 -52.914 -0.848 2.875 -0.313 H6 2JL 33 2JL H7 H7 H 0 1 N N N 1.403 18.869 -48.743 -7.036 -2.115 0.277 H7 2JL 34 2JL H8 H8 H 0 1 N N N -1.222 21.926 -51.599 -5.087 2.431 0.424 H8 2JL 35 2JL H9 H9 H 0 1 N N N -2.997 21.343 -52.192 -3.238 2.647 0.102 H9 2JL 36 2JL H10 H10 H 0 1 N N N -0.357 17.257 -48.805 -4.826 -3.058 -0.243 H10 2JL 37 2JL H11 H11 H 0 1 N N N -2.594 16.528 -49.548 -2.473 -2.785 -0.656 H11 2JL 38 2JL H12 H12 H 0 1 N N N -4.609 16.909 -50.765 -0.486 -1.361 -0.872 H12 2JL 39 2JL H13 H13 H 0 1 N N N -6.675 15.840 -49.779 1.833 -1.601 2.692 H13 2JL 40 2JL H14 H14 H 0 1 N N N -7.640 16.501 -48.416 1.752 0.170 2.522 H14 2JL 41 2JL H15 H15 H 0 1 N N N -6.487 18.227 -49.832 1.600 -1.891 0.273 H15 2JL 42 2JL H16 H16 H 0 1 N N N -8.268 18.425 -49.698 0.281 -0.841 0.850 H16 2JL 43 2JL H17 H17 H 0 1 N N N -8.778 17.242 -53.047 3.447 1.258 -0.937 H17 2JL 44 2JL H18 H18 H 0 1 N N N -11.635 18.137 -50.665 5.380 -1.502 -2.169 H18 2JL 45 2JL H19 H19 H 0 1 N N N -11.225 13.700 -51.764 6.973 1.638 0.460 H19 2JL 46 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 2JL OAC CAT DOUB N N 1 2JL O C DOUB N N 2 2JL CAT CAU SING N N 3 2JL CAT NAZ SING N N 4 2JL CAH CAK DOUB Y N 5 2JL CAH CAU SING Y N 6 2JL C CA SING N N 7 2JL C OXT SING N N 8 2JL CB CG SING N N 9 2JL CB CA SING N N 10 2JL CB NAZ SING N N 11 2JL OD1 CG DOUB N N 12 2JL CAK CAY SING Y N 13 2JL CAU CAN DOUB Y N 14 2JL CG OD2 SING N N 15 2JL CA N SING N N 16 2JL NAZ CAP SING N N 17 2JL CAN CAW SING Y N 18 2JL CAY CAW DOUB Y N 19 2JL CAY CAX SING Y N 20 2JL CAJ CAX DOUB Y N 21 2JL CAJ CAG SING Y N 22 2JL CAW CAM SING Y N 23 2JL CAX CAV SING Y N 24 2JL CAG CAF DOUB Y N 25 2JL CAP CAO SING N N 26 2JL N CAO SING N N 27 2JL CAM CAL DOUB Y N 28 2JL CAV CAL SING Y N 29 2JL CAV CAI DOUB Y N 30 2JL CAF CAI SING Y N 31 2JL N H1 SING N N 32 2JL CA H3 SING N N 33 2JL CAF H4 SING N N 34 2JL CAG H5 SING N N 35 2JL CAH H6 SING N N 36 2JL CAI H7 SING N N 37 2JL CAJ H8 SING N N 38 2JL CAK H9 SING N N 39 2JL CAL H10 SING N N 40 2JL CAM H11 SING N N 41 2JL CAN H12 SING N N 42 2JL CAO H13 SING N N 43 2JL CAO H14 SING N N 44 2JL CAP H15 SING N N 45 2JL CAP H16 SING N N 46 2JL CB H17 SING N N 47 2JL OD2 H18 SING N N 48 2JL OXT H19 SING N N 49 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 2JL SMILES ACDLabs 12.01 "O=C(c3cc2ccc1ccccc1c2cc3)N4C(C(=O)O)C(C(=O)O)NCC4" 2JL InChI InChI 1.03 "InChI=1S/C21H18N2O5/c24-19(23-10-9-22-17(20(25)26)18(23)21(27)28)14-7-8-16-13(11-14)6-5-12-3-1-2-4-15(12)16/h1-8,11,17-18,22H,9-10H2,(H,25,26)(H,27,28)/t17-,18+/m1/s1" 2JL InChIKey InChI 1.03 IWWXIZOMXGOTPP-MSOLQXFVSA-N 2JL SMILES_CANONICAL CACTVS 3.385 "OC(=O)[C@@H]1NCCN([C@@H]1C(O)=O)C(=O)c2ccc3c(ccc4ccccc34)c2" 2JL SMILES CACTVS 3.385 "OC(=O)[CH]1NCCN([CH]1C(O)=O)C(=O)c2ccc3c(ccc4ccccc34)c2" 2JL SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "c1ccc2c(c1)ccc3c2ccc(c3)C(=O)N4CCN[C@H]([C@H]4C(=O)O)C(=O)O" 2JL SMILES "OpenEye OEToolkits" 1.7.6 "c1ccc2c(c1)ccc3c2ccc(c3)C(=O)N4CCNC(C4C(=O)O)C(=O)O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 2JL "SYSTEMATIC NAME" ACDLabs 12.01 "(2S,3R)-1-(phenanthren-2-ylcarbonyl)piperazine-2,3-dicarboxylic acid" 2JL "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "(2S,3R)-1-phenanthren-2-ylcarbonylpiperazine-2,3-dicarboxylic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 2JL "Create component" 2013-10-31 RCSB 2JL "Initial release" 2014-03-12 RCSB #