data_2L9 # _chem_comp.id 2L9 _chem_comp.name ;(3aR,5aS,8S,10aS)-10-oxo-1,2,3,3a,5a,8,10,10a-octahydrodipyrrolo[1,2-a:3',2'-e]azepine-8-carboxylic acid ; _chem_comp.type "L-PEPTIDE LINKING" _chem_comp.pdbx_type ATOMP _chem_comp.formula "C12 H14 N2 O3" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2013-11-25 _chem_comp.pdbx_modified_date 2014-10-10 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 234.251 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 2L9 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 4MY6 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 2L9 N2 N2 N 0 1 N N N 22.092 -1.486 -9.807 2.880 1.134 -0.774 N2 2L9 1 2L9 C22 C22 C 0 1 N N N 22.716 -0.527 -10.789 4.005 0.641 0.060 C22 2L9 2 2L9 C23 C23 C 0 1 N N N 24.105 -0.248 -10.250 3.490 -0.598 0.838 C23 2L9 3 2L9 C8 C8 C 0 1 N N R 23.819 -0.306 -8.745 1.967 -0.389 0.804 C8 2L9 4 2L9 C21 C21 C 0 1 N N S 22.840 -1.482 -8.556 1.758 0.213 -0.579 C21 2L9 5 2L9 C25 C25 C 0 1 N N N 21.974 -1.259 -7.343 0.400 0.780 -0.756 C25 2L9 6 2L9 O7 O7 O 0 1 N N N 20.750 -0.978 -7.384 0.240 1.968 -0.940 O7 2L9 7 2L9 C7 C7 C 0 1 N N N 25.010 -0.509 -7.873 1.140 -1.548 1.129 C7 2L9 8 2L9 C6 C6 C 0 1 N N N 25.073 -1.199 -6.711 0.104 -2.032 0.545 C6 2L9 9 2L9 C5 C5 C 0 1 N N S 23.996 -1.944 -6.000 -0.528 -1.528 -0.719 C5 2L9 10 2L9 C4 C4 C 0 1 N N N 24.305 -1.991 -4.497 -1.938 -2.062 -0.816 C4 2L9 11 2L9 C3 C3 C 0 1 N N N 23.031 -1.620 -3.772 -2.797 -1.082 -0.782 C3 2L9 12 2L9 C2 C2 C 0 1 N N S 21.963 -1.271 -4.816 -2.076 0.237 -0.668 C2 2L9 13 2L9 N1 N1 N 0 1 N N N 22.611 -1.386 -6.138 -0.647 -0.059 -0.706 N1 2L9 14 2L9 C1 C1 C 0 1 N N N 21.524 0.130 -4.554 -2.428 0.907 0.635 C1 2L9 15 2L9 O2 O2 O 0 1 N N N 20.506 0.310 -3.807 -1.566 1.138 1.448 O2 2L9 16 2L9 OXT OXT O 0 1 N N N 22.198 1.057 -5.085 -3.701 1.247 0.892 OXT 2L9 17 2L9 H26 H26 H 0 1 N N N 22.131 0.403 -10.844 4.843 0.357 -0.578 H26 2L9 18 2L9 H27 H27 H 0 1 N N N 22.775 -0.983 -11.788 4.315 1.417 0.760 H27 2L9 19 2L9 H28 H28 H 0 1 N N N 24.826 -1.019 -10.559 3.767 -1.521 0.327 H28 2L9 20 2L9 H29 H29 H 0 1 N N N 24.472 0.742 -10.559 3.860 -0.596 1.863 H29 2L9 21 2L9 H30 H30 H 0 1 N N N 23.309 0.623 -8.449 1.732 0.387 1.532 H30 2L9 22 2L9 H31 H31 H 0 1 N N N 23.409 -2.417 -8.443 1.868 -0.593 -1.304 H31 2L9 23 2L9 H32 H32 H 0 1 N N N 25.930 -0.052 -8.207 1.453 -2.091 2.009 H32 2L9 24 2L9 H33 H33 H 0 1 N N N 26.040 -1.212 -6.231 -0.360 -2.888 1.011 H33 2L9 25 2L9 H34 H34 H 0 1 N N N 23.988 -2.979 -6.373 0.053 -1.855 -1.581 H34 2L9 26 2L9 H35 H35 H 0 1 N N N 25.253 -2.242 -4.043 -2.197 -3.107 -0.901 H35 2L9 27 2L9 H36 H36 H 0 1 N N N 22.896 -1.604 -2.701 -3.870 -1.198 -0.829 H36 2L9 28 2L9 H37 H37 H 0 1 N N N 21.114 -1.966 -4.734 -2.345 0.883 -1.504 H37 2L9 29 2L9 H2 H2 H 0 1 N Y N 21.148 -1.208 -9.628 2.625 2.075 -0.516 H2 2L9 30 2L9 H1 H1 H 0 1 N N N 21.829 1.898 -4.841 -3.879 1.674 1.741 H1 2L9 31 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 2L9 C22 C23 SING N N 1 2L9 C22 N2 SING N N 2 2L9 C23 C8 SING N N 3 2L9 N2 C21 SING N N 4 2L9 C8 C21 SING N N 5 2L9 C8 C7 SING N N 6 2L9 C21 C25 SING N N 7 2L9 C7 C6 DOUB N N 8 2L9 O7 C25 DOUB N N 9 2L9 C25 N1 SING N N 10 2L9 C6 C5 SING N N 11 2L9 N1 C5 SING N N 12 2L9 N1 C2 SING N N 13 2L9 C5 C4 SING N N 14 2L9 OXT C1 SING N N 15 2L9 C2 C1 SING N N 16 2L9 C2 C3 SING N N 17 2L9 C1 O2 DOUB N N 18 2L9 C4 C3 DOUB N N 19 2L9 C22 H26 SING N N 20 2L9 C22 H27 SING N N 21 2L9 C23 H28 SING N N 22 2L9 C23 H29 SING N N 23 2L9 C8 H30 SING N N 24 2L9 C21 H31 SING N N 25 2L9 C7 H32 SING N N 26 2L9 C6 H33 SING N N 27 2L9 C5 H34 SING N N 28 2L9 C4 H35 SING N N 29 2L9 C3 H36 SING N N 30 2L9 C2 H37 SING N N 31 2L9 N2 H2 SING N N 32 2L9 OXT H1 SING N N 33 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 2L9 SMILES ACDLabs 12.01 "O=C(O)C2C=CC1C=CC3C(C(=O)N12)NCC3" 2L9 InChI InChI 1.03 "InChI=1S/C12H14N2O3/c15-11-10-7(5-6-13-10)1-2-8-3-4-9(12(16)17)14(8)11/h1-4,7-10,13H,5-6H2,(H,16,17)/t7-,8-,9-,10-/m0/s1" 2L9 InChIKey InChI 1.03 RHEQTEWEWCAEQP-XKNYDFJKSA-N 2L9 SMILES_CANONICAL CACTVS 3.385 "OC(=O)[C@@H]1C=C[C@@H]2C=C[C@H]3CCN[C@@H]3C(=O)N12" 2L9 SMILES CACTVS 3.385 "OC(=O)[CH]1C=C[CH]2C=C[CH]3CCN[CH]3C(=O)N12" 2L9 SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "C1CN[C@H]2[C@H]1C=C[C@H]3C=C[C@H](N3C2=O)C(=O)O" 2L9 SMILES "OpenEye OEToolkits" 1.7.6 "C1CNC2C1C=CC3C=CC(N3C2=O)C(=O)O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 2L9 "SYSTEMATIC NAME" ACDLabs 12.01 ;(3aR,5aS,8S,10aS)-10-oxo-1,2,3,3a,5a,8,10,10a-octahydrodipyrrolo[1,2-a:3',2'-e]azepine-8-carboxylic acid ; 2L9 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 ;(3aR,5aS,8S,10aS)-10-oxidanylidene-2,3,3a,5a,8,10a-hexahydro-1H-dipyrrolo[3,2-b:3',1'-f]azepine-8-carboxylic acid ; # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 2L9 "Create component" 2013-11-25 RCSB 2L9 "Initial release" 2014-10-15 RCSB #