data_2NP # _chem_comp.id 2NP _chem_comp.name "L-2-AMINO-6-METHYLENE-PIMELIC ACID" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C8 H13 N O4" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2000-05-24 _chem_comp.pdbx_modified_date 2011-06-04 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 187.193 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 2NP _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details ? _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 1F06 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 2NP C1 C1 C 0 1 N N N 9.833 34.519 41.254 -0.298 -0.014 3.579 C1 2NP 1 2NP O11 O11 O 0 1 N N N 8.730 33.824 41.295 0.586 -0.459 4.272 O11 2NP 2 2NP O12 O12 O 0 1 N N N 10.583 34.622 42.312 -1.569 -0.051 4.008 O12 2NP 3 2NP C2 C2 C 0 1 N N S 10.245 35.217 39.987 0.026 0.580 2.233 C2 2NP 4 2NP N2 N2 N 0 1 N N N 11.026 36.379 40.401 1.376 1.159 2.267 N2 2NP 5 2NP C3 C3 C 0 1 N N N 11.134 34.316 39.164 -0.033 -0.512 1.164 C3 2NP 6 2NP C4 C4 C 0 1 N N N 10.337 33.180 38.597 0.295 0.092 -0.201 C4 2NP 7 2NP C5 C5 C 0 1 N N N 11.036 32.689 37.349 0.235 -1.000 -1.270 C5 2NP 8 2NP C6 C6 C 0 1 N N N 12.302 31.983 37.751 0.560 -0.405 -2.616 C6 2NP 9 2NP C8 C8 C 0 1 N N N 13.479 32.582 37.560 1.820 -0.369 -3.041 C8 2NP 10 2NP C7 C7 C 0 1 N N N 12.237 30.591 38.369 -0.515 0.135 -3.459 C7 2NP 11 2NP O71 O71 O 0 1 N N N 13.262 30.034 38.753 -0.253 0.615 -4.544 O71 2NP 12 2NP O72 O72 O 0 1 N N N 11.101 29.988 38.500 -1.792 0.098 -3.028 O72 2NP 13 2NP H12 H12 H 0 1 N N N 11.386 35.128 42.282 -1.777 -0.433 4.872 H12 2NP 14 2NP H21 1H2 H 0 1 N N N 9.353 35.494 39.377 -0.697 1.360 1.997 H21 2NP 15 2NP HN21 1HN2 H 0 0 N N N 11.305 36.852 39.541 2.009 0.405 2.488 HN21 2NP 16 2NP HN22 2HN2 H 0 0 N N N 11.810 36.145 41.009 1.590 1.450 1.325 HN22 2NP 17 2NP H31 1H3 H 0 1 N N N 11.678 34.879 38.370 0.690 -1.292 1.401 H31 2NP 18 2NP H32 2H3 H 0 1 N N N 12.015 33.957 39.744 -1.035 -0.941 1.140 H32 2NP 19 2NP H41 1H4 H 0 1 N N N 10.160 32.366 39.338 -0.428 0.871 -0.438 H41 2NP 20 2NP H42 2H4 H 0 1 N N N 9.271 33.451 38.414 1.297 0.521 -0.176 H42 2NP 21 2NP H51 1H5 H 0 1 N N N 10.376 32.053 36.713 0.960 -1.780 -1.034 H51 2NP 22 2NP H52 2H5 H 0 1 N N N 11.218 33.506 36.612 -0.765 -1.430 -1.295 H52 2NP 23 2NP H81 1H8 H 0 1 N N N 13.526 33.589 37.112 2.053 0.057 -4.006 H81 2NP 24 2NP H82 2H8 H 0 1 N N N 14.407 32.064 37.854 2.611 -0.766 -2.422 H82 2NP 25 2NP H72 H72 H 0 1 N N N 11.060 29.120 38.885 -2.499 0.454 -3.583 H72 2NP 26 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 2NP C1 O11 DOUB N N 1 2NP C1 O12 SING N N 2 2NP C1 C2 SING N N 3 2NP O12 H12 SING N N 4 2NP C2 N2 SING N N 5 2NP C2 C3 SING N N 6 2NP C2 H21 SING N N 7 2NP N2 HN21 SING N N 8 2NP N2 HN22 SING N N 9 2NP C3 C4 SING N N 10 2NP C3 H31 SING N N 11 2NP C3 H32 SING N N 12 2NP C4 C5 SING N N 13 2NP C4 H41 SING N N 14 2NP C4 H42 SING N N 15 2NP C5 C6 SING N N 16 2NP C5 H51 SING N N 17 2NP C5 H52 SING N N 18 2NP C6 C8 DOUB N N 19 2NP C6 C7 SING N N 20 2NP C8 H81 SING N N 21 2NP C8 H82 SING N N 22 2NP C7 O71 DOUB N N 23 2NP C7 O72 SING N N 24 2NP O72 H72 SING N N 25 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 2NP SMILES ACDLabs 10.04 "O=C(O)/C(=C)CCCC(N)C(=O)O" 2NP SMILES_CANONICAL CACTVS 3.341 "N[C@@H](CCCC(=C)C(O)=O)C(O)=O" 2NP SMILES CACTVS 3.341 "N[CH](CCCC(=C)C(O)=O)C(O)=O" 2NP SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "C=C(CCC[C@@H](C(=O)O)N)C(=O)O" 2NP SMILES "OpenEye OEToolkits" 1.5.0 "C=C(CCCC(C(=O)O)N)C(=O)O" 2NP InChI InChI 1.03 "InChI=1S/C8H13NO4/c1-5(7(10)11)3-2-4-6(9)8(12)13/h6H,1-4,9H2,(H,10,11)(H,12,13)/t6-/m0/s1" 2NP InChIKey InChI 1.03 SGAIRWMSXVAPOO-LURJTMIESA-N # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 2NP "SYSTEMATIC NAME" ACDLabs 10.04 "(2S)-2-amino-6-methylideneheptanedioic acid" 2NP "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "(2S)-2-amino-6-methylidene-heptanedioic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 2NP "Create component" 2000-05-24 RCSB 2NP "Modify descriptor" 2011-06-04 RCSB #