data_2QD # _chem_comp.id 2QD _chem_comp.name "(4R)-4-[3-(methylamino)-3-oxopropyl]-L-glutamic acid" _chem_comp.type "L-PEPTIDE LINKING" _chem_comp.pdbx_type ATOMP _chem_comp.formula "C9 H16 N2 O5" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2014-01-08 _chem_comp.pdbx_modified_date 2014-08-01 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 232.234 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 2QD _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 4NWD _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 2QD O O O 0 1 N N N -1.089 30.876 -13.939 4.498 1.540 0.347 O 2QD 1 2QD C C C 0 1 N N N -2.219 31.158 -13.450 3.920 0.646 -0.224 C 2QD 2 2QD OXT OXT O 0 1 N Y N -2.494 32.190 -12.783 4.355 0.220 -1.420 OXT 2QD 3 2QD CA CA C 0 1 N N S -3.355 30.158 -13.671 2.712 0.004 0.410 CA 2QD 4 2QD N N N 0 1 N N N -4.556 30.652 -12.995 2.718 0.271 1.855 N 2QD 5 2QD CB CB C 0 1 N N N -3.598 29.899 -15.176 1.441 0.586 -0.211 CB 2QD 6 2QD CG CG C 0 1 N N R -4.313 28.559 -15.478 0.219 -0.152 0.342 CG 2QD 7 2QD CD2 CD2 C 0 1 N N N -3.619 27.381 -14.791 0.258 -1.591 -0.103 CD2 2QD 8 2QD OAG OAG O 0 1 N N N -2.358 27.368 -14.857 1.169 -1.986 -0.792 OAG 2QD 9 2QD OAD OAD O 0 1 N N N -4.370 26.534 -14.247 -0.719 -2.434 0.266 OAD 2QD 10 2QD CD1 CD1 C 0 1 N N N -4.379 28.240 -16.991 -1.057 0.510 -0.182 CD1 2QD 11 2QD CAH CAH C 0 1 N N N -5.667 28.724 -17.656 -2.276 -0.147 0.468 CAH 2QD 12 2QD CAN CAN C 0 1 N N N -6.884 28.666 -16.736 -3.533 0.505 -0.049 CAN 2QD 13 2QD OAE OAE O 0 1 N N N -7.307 27.580 -16.294 -3.460 1.406 -0.857 OAE 2QD 14 2QD NAK NAK N 0 1 N N N -7.410 29.888 -16.475 -4.737 0.086 0.388 NAK 2QD 15 2QD CAA CAA C 0 1 N N N -8.601 29.959 -15.597 -5.959 0.720 -0.114 CAA 2QD 16 2QD H1 H1 H 0 1 N Y N -1.717 32.731 -12.701 5.136 0.659 -1.785 H1 2QD 17 2QD H2 H2 H 0 1 N N N -3.059 29.204 -13.211 2.740 -1.072 0.239 H2 2QD 18 2QD H3 H3 H 0 1 N N N -4.355 30.806 -12.028 3.516 -0.159 2.299 H3 2QD 19 2QD H4 H4 H 0 1 N N N -4.845 31.512 -13.416 2.692 1.263 2.039 H4 2QD 20 2QD H6 H6 H 0 1 N N N -2.624 29.894 -15.688 1.367 1.645 0.036 H6 2QD 21 2QD H7 H7 H 0 1 N N N -4.216 30.718 -15.572 1.478 0.467 -1.294 H7 2QD 22 2QD H8 H8 H 0 1 N N N -5.342 28.626 -15.096 0.231 -0.108 1.431 H8 2QD 23 2QD H9 H9 H 0 1 N N N -3.843 25.840 -13.868 -0.651 -3.347 -0.044 H9 2QD 24 2QD H10 H10 H 0 1 N N N -4.307 27.150 -17.121 -1.042 1.572 0.064 H10 2QD 25 2QD H11 H11 H 0 1 N N N -3.526 28.726 -17.488 -1.111 0.388 -1.264 H11 2QD 26 2QD H12 H12 H 0 1 N N N -5.523 29.766 -17.978 -2.290 -1.209 0.222 H12 2QD 27 2QD H13 H13 H 0 1 N N N -5.864 28.093 -18.535 -2.221 -0.025 1.549 H13 2QD 28 2QD H14 H14 H 0 1 N N N -7.006 30.716 -16.863 -4.795 -0.635 1.034 H14 2QD 29 2QD H15 H15 H 0 1 N N N -8.909 31.009 -15.480 -5.945 1.781 0.131 H15 2QD 30 2QD H16 H16 H 0 1 N N N -9.423 29.384 -16.048 -6.014 0.597 -1.196 H16 2QD 31 2QD H17 H17 H 0 1 N N N -8.355 29.537 -14.611 -6.828 0.251 0.349 H17 2QD 32 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 2QD CAH CD1 SING N N 1 2QD CAH CAN SING N N 2 2QD CD1 CG SING N N 3 2QD CAN NAK SING N N 4 2QD CAN OAE DOUB N N 5 2QD NAK CAA SING N N 6 2QD CG CB SING N N 7 2QD CG CD2 SING N N 8 2QD CB CA SING N N 9 2QD OAG CD2 DOUB N N 10 2QD CD2 OAD SING N N 11 2QD O C DOUB N N 12 2QD CA C SING N N 13 2QD CA N SING N N 14 2QD C OXT SING N N 15 2QD OXT H1 SING N N 16 2QD CA H2 SING N N 17 2QD N H3 SING N N 18 2QD N H4 SING N N 19 2QD CB H6 SING N N 20 2QD CB H7 SING N N 21 2QD CG H8 SING N N 22 2QD OAD H9 SING N N 23 2QD CD1 H10 SING N N 24 2QD CD1 H11 SING N N 25 2QD CAH H12 SING N N 26 2QD CAH H13 SING N N 27 2QD NAK H14 SING N N 28 2QD CAA H15 SING N N 29 2QD CAA H16 SING N N 30 2QD CAA H17 SING N N 31 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 2QD SMILES ACDLabs 12.01 "O=C(O)C(N)CC(C(=O)O)CCC(=O)NC" 2QD InChI InChI 1.03 "InChI=1S/C9H16N2O5/c1-11-7(12)3-2-5(8(13)14)4-6(10)9(15)16/h5-6H,2-4,10H2,1H3,(H,11,12)(H,13,14)(H,15,16)/t5-,6+/m1/s1" 2QD InChIKey InChI 1.03 NIJAFEMYFNBSBE-RITPCOANSA-N 2QD SMILES_CANONICAL CACTVS 3.385 "CNC(=O)CC[C@H](C[C@H](N)C(O)=O)C(O)=O" 2QD SMILES CACTVS 3.385 "CNC(=O)CC[CH](C[CH](N)C(O)=O)C(O)=O" 2QD SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "CNC(=O)CC[C@H](C[C@@H](C(=O)O)N)C(=O)O" 2QD SMILES "OpenEye OEToolkits" 1.7.6 "CNC(=O)CCC(CC(C(=O)O)N)C(=O)O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 2QD "SYSTEMATIC NAME" ACDLabs 12.01 "(4R)-4-[3-(methylamino)-3-oxopropyl]-L-glutamic acid" 2QD "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "(2S,4R)-2-azanyl-4-[3-(methylamino)-3-oxidanylidene-propyl]pentanedioic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 2QD "Create component" 2014-01-08 RCSB 2QD "Initial release" 2014-08-06 RCSB #