data_2QZ # _chem_comp.id 2QZ _chem_comp.name N,N-dimethyl-L-threonine _chem_comp.type "L-PEPTIDE LINKING" _chem_comp.pdbx_type ATOMP _chem_comp.formula "C6 H13 N O3" _chem_comp.mon_nstd_parent_comp_id THR _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2014-01-10 _chem_comp.pdbx_modified_date 2024-09-27 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 147.172 _chem_comp.one_letter_code T _chem_comp.three_letter_code 2QZ _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag Y _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 4NVU _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm Y # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 2QZ N N N 0 1 N N N Y Y N 87.449 -9.867 41.577 0.207 1.321 -0.320 N1 2QZ 1 2QZ CN1 CN1 C 0 1 N N N N N N 86.411 -9.016 40.996 -0.967 2.128 -0.678 CX1 2QZ 2 2QZ CN2 CN2 C 0 1 N N N N N N 88.461 -10.099 40.543 0.496 1.423 1.117 CY1 2QZ 3 2QZ CA CA C 0 1 N N S Y N N 88.066 -9.232 42.753 0.027 -0.080 -0.723 CA1 2QZ 4 2QZ C C C 0 1 N N N Y N Y 89.233 -10.055 43.322 -1.217 -0.632 -0.077 C1 2QZ 5 2QZ O O O 0 1 N N N Y N Y 90.244 -9.490 43.727 -1.761 -0.018 0.810 O1 2QZ 6 2QZ CB CB C 0 1 N N R N N N 87.057 -8.892 43.880 1.240 -0.899 -0.278 CB1 2QZ 7 2QZ OG1 OG1 O 0 1 N N N N N N 87.392 -7.568 44.308 1.285 -0.945 1.150 OG1 2QZ 8 2QZ CG2 CG2 C 0 1 N N N N N N 86.700 -10.079 44.745 2.519 -0.246 -0.808 CG1 2QZ 9 2QZ H8 H2 H 0 1 N N N N N N 85.632 -8.821 41.748 -1.849 1.730 -0.175 H2 2QZ 10 2QZ H3 H3 H 0 1 N N N N N N 86.856 -8.063 40.674 -0.808 3.160 -0.369 H3 2QZ 11 2QZ H4 H4 H 0 1 N N N N N N 85.964 -9.524 40.129 -1.117 2.091 -1.758 H4 2QZ 12 2QZ H5 H5 H 0 1 N N N N N N 89.260 -10.738 40.948 1.478 0.995 1.321 H5 2QZ 13 2QZ H6 H6 H 0 1 N N N N N N 87.995 -10.597 39.680 0.488 2.471 1.416 H6 2QZ 14 2QZ H7 H7 H 0 1 N N N N N N 88.888 -9.136 40.225 -0.261 0.878 1.679 H7 2QZ 15 2QZ HA H8 H 0 1 N N N Y N N 88.493 -8.274 42.420 -0.071 -0.136 -1.807 H8 2QZ 16 2QZ H9 H9 H 0 1 N N N N N N 86.129 -8.735 43.310 1.159 -1.912 -0.672 H9 2QZ 17 2QZ H10 H10 H 0 1 N N N N N N 85.984 -9.767 45.519 2.484 -0.211 -1.896 H10 2QZ 18 2QZ H11 H11 H 0 1 N N N N N N 86.247 -10.864 44.122 2.599 0.767 -0.414 H11 2QZ 19 2QZ H12 H12 H 0 1 N N N N N N 87.610 -10.471 45.223 3.383 -0.829 -0.490 H12 2QZ 20 2QZ OXT OXT O 0 1 N Y N Y N Y ? ? ? -1.721 -1.807 -0.486 OXT 2QZ 21 2QZ HXT HXT H 0 1 N Y N Y N Y ? ? ? -2.520 -2.121 -0.042 HXT 2QZ 22 2QZ H13 H13 H 0 1 N Y N N N N 86.803 -7.301 45.004 2.031 -1.449 1.503 H13 2QZ 23 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 2QZ CN2 N SING N N 1 2QZ CN1 N SING N N 2 2QZ N CA SING N N 3 2QZ CA C SING N N 4 2QZ CA CB SING N N 5 2QZ C O DOUB N N 6 2QZ CB OG1 SING N N 7 2QZ CB CG2 SING N N 8 2QZ CN1 H8 SING N N 9 2QZ CN1 H3 SING N N 10 2QZ CN1 H4 SING N N 11 2QZ CN2 H5 SING N N 12 2QZ CN2 H6 SING N N 13 2QZ CN2 H7 SING N N 14 2QZ CA HA SING N N 15 2QZ CB H9 SING N N 16 2QZ CG2 H10 SING N N 17 2QZ CG2 H11 SING N N 18 2QZ CG2 H12 SING N N 19 2QZ C OXT SING N N 20 2QZ OXT HXT SING N N 21 2QZ OG1 H13 SING N N 22 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 2QZ SMILES ACDLabs 12.01 "O=C(O)C(N(C)C)C(O)C" 2QZ InChI InChI 1.03 "InChI=1S/C6H13NO3/c1-4(8)5(6(9)10)7(2)3/h4-5,8H,1-3H3,(H,9,10)/t4-,5+/m1/s1" 2QZ InChIKey InChI 1.03 CIVVRPHZRYVSCF-UHNVWZDZSA-N 2QZ SMILES_CANONICAL CACTVS 3.385 "C[C@@H](O)[C@H](N(C)C)C(O)=O" 2QZ SMILES CACTVS 3.385 "C[CH](O)[CH](N(C)C)C(O)=O" 2QZ SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "C[C@H]([C@@H](C(=O)O)N(C)C)O" 2QZ SMILES "OpenEye OEToolkits" 1.7.6 "CC(C(C(=O)O)N(C)C)O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 2QZ "SYSTEMATIC NAME" ACDLabs 12.01 N,N-dimethyl-L-threonine 2QZ "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "(2S,3R)-2-(dimethylamino)-3-oxidanyl-butanoic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 2QZ "Create component" 2014-01-10 RCSB 2QZ "Initial release" 2014-04-02 RCSB 2QZ "Modify backbone" 2023-11-03 PDBE 2QZ "Modify PCM" 2024-09-27 PDBE # _pdbx_chem_comp_pcm.pcm_id 1 _pdbx_chem_comp_pcm.comp_id 2QZ _pdbx_chem_comp_pcm.modified_residue_id THR _pdbx_chem_comp_pcm.type Methylation _pdbx_chem_comp_pcm.category "Named protein modification" _pdbx_chem_comp_pcm.position "Amino-acid backbone" _pdbx_chem_comp_pcm.polypeptide_position N-terminal _pdbx_chem_comp_pcm.comp_id_linking_atom ? _pdbx_chem_comp_pcm.modified_residue_id_linking_atom ? _pdbx_chem_comp_pcm.uniprot_specific_ptm_accession ? _pdbx_chem_comp_pcm.uniprot_generic_ptm_accession ? #