data_2TC # _chem_comp.id 2TC _chem_comp.name "(4S,4AS,6S,8AS)-6-[(1S)-7-CHLORO-4-HYDROXY-1-METHYL-3-OXO-1,3-DIHYDRO-2-BENZOFURAN-1-YL]-4-(DIMETHYLAMINO)-3,8A-DIHYDROXY-1,8-DIOXO-1,4,4A,5,6,7,8,8A-OCTAHYDRONAPHTHALENE-2-CARBONITRILE" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C22 H21 Cl N2 O7" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms 7-CHLOR-2-CYANO-ISO-TETRACYCLINE _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2010-02-18 _chem_comp.pdbx_modified_date 2021-03-01 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 460.864 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 2TC _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 2X6O _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site EBI # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 2TC C1 C1 C 0 1 N N N 20.969 35.158 33.947 -2.243 1.099 -1.037 C1 2TC 1 2TC O1 O1 O 0 1 N N N 20.610 35.693 32.862 -1.672 1.948 -1.691 O1 2TC 2 2TC C2 C2 C 0 1 N N N 20.075 34.295 34.732 -3.227 1.470 -0.018 C2 2TC 3 2TC C21 C21 C 0 1 N N N 18.917 33.627 34.101 -3.717 2.814 0.047 C21 2TC 4 2TC N21 N21 N 0 1 N N N 17.996 33.086 33.635 -4.105 3.880 0.099 N21 2TC 5 2TC C3 C3 C 0 1 N N N 20.343 34.047 36.067 -3.682 0.532 0.875 C3 2TC 6 2TC O3 O3 O 0 1 N N N 19.517 33.218 36.733 -4.573 0.905 1.807 O3 2TC 7 2TC C4 C4 C 0 1 N N S 21.481 34.716 36.848 -3.221 -0.895 0.847 C4 2TC 8 2TC N4 N4 N 0 1 N N N 22.315 33.783 37.688 -4.224 -1.711 0.149 N4 2TC 9 2TC C43 C43 C 0 1 N N N 23.348 32.997 37.011 -3.841 -3.129 0.148 C43 2TC 10 2TC C42 C42 C 0 1 N N N 22.967 34.457 38.816 -5.556 -1.525 0.740 C42 2TC 11 2TC C41 C41 C 0 1 N N S 22.333 35.699 35.974 -1.881 -1.035 0.134 C41 2TC 12 2TC C5 C5 C 0 1 N N N 21.876 37.167 36.120 -0.770 -0.376 0.948 C5 2TC 13 2TC C51 C51 C 0 1 N N S 22.821 38.135 35.390 0.583 -0.646 0.285 C51 2TC 14 2TC C6 C6 C 0 1 N N S 22.539 39.634 35.614 1.700 -0.048 1.142 C6 2TC 15 2TC C62 C62 C 0 1 N N N 22.789 40.032 37.067 1.677 -0.669 2.541 C62 2TC 16 2TC O6 O6 O 0 1 N N N 21.189 40.035 35.308 1.541 1.394 1.234 O6 2TC 17 2TC C61 C61 C 0 1 Y N N 23.368 40.570 34.773 3.038 -0.289 0.491 C61 2TC 18 2TC C7 C7 C 0 1 Y N N 24.763 40.653 34.639 3.729 -1.427 0.146 C7 2TC 19 2TC C8 C8 C 0 1 Y N N 25.266 41.649 33.786 4.975 -1.327 -0.457 C8 2TC 20 2TC C9 C9 C 0 1 Y N N 24.406 42.544 33.104 5.528 -0.088 -0.714 C9 2TC 21 2TC C10 C10 C 0 1 Y N N 23.027 42.439 33.272 4.843 1.068 -0.371 C10 2TC 22 2TC O10 O10 O 0 1 N N N 22.188 43.247 32.658 5.389 2.284 -0.624 O10 2TC 23 2TC C1A C1A C 0 1 Y N N 22.540 41.454 34.118 3.584 0.973 0.238 C1A 2TC 24 2TC O11 O11 O 0 1 N N N 20.159 41.815 33.853 2.797 3.189 0.642 O11 2TC 25 2TC C1B C1B C 0 1 N N N 22.799 37.733 33.954 0.609 -0.005 -1.106 C1B 2TC 26 2TC C12 C12 C 0 1 N N N 23.167 36.445 33.756 -0.587 -0.495 -1.892 C12 2TC 27 2TC O12 O12 O 0 1 N N N 24.189 36.207 32.982 -0.456 -0.968 -2.995 O12 2TC 28 2TC C1C C1C C 0 1 N N S 22.402 35.346 34.487 -1.961 -0.374 -1.255 C1C 2TC 29 2TC CL7 CL7 CL 0 0 N N N 25.884 39.522 35.487 3.042 -2.989 0.464 CL7 2TC 30 2TC C11 C11 C 0 1 N N N 21.144 41.175 34.393 2.628 1.988 0.712 C11 2TC 31 2TC O1C O1C O 0 1 N N N 23.091 34.099 34.415 -2.979 -0.977 -2.056 O1C 2TC 32 2TC H3 H3 H 0 1 N N N 19.322 32.462 36.192 -4.853 1.831 1.801 H3 2TC 33 2TC H4 H4 H 0 1 N N N 20.963 35.340 37.591 -3.118 -1.256 1.871 H4 2TC 34 2TC H41 H41 H 0 1 N N N 23.348 35.581 36.382 -1.653 -2.092 0.003 H41 2TC 35 2TC H421 H421 H 0 0 N N N 23.130 33.736 39.630 -5.844 -0.477 0.664 H421 2TC 36 2TC H422 H422 H 0 0 N N N 23.934 34.866 38.489 -6.280 -2.140 0.204 H422 2TC 37 2TC H423 H423 H 0 0 N N N 22.325 35.275 39.175 -5.533 -1.821 1.788 H423 2TC 38 2TC H431 H431 H 0 0 N N N 23.039 32.800 35.974 -3.652 -3.455 1.171 H431 2TC 39 2TC H432 H432 H 0 0 N N N 24.294 33.558 37.011 -4.649 -3.723 -0.279 H432 2TC 40 2TC H433 H433 H 0 0 N N N 23.487 32.042 37.540 -2.938 -3.261 -0.448 H433 2TC 41 2TC H51C H51C H 0 0 N N N 20.868 37.267 35.690 -0.942 0.699 0.995 H51C 2TC 42 2TC H52C H52C H 0 0 N N N 21.882 37.423 37.190 -0.767 -0.787 1.958 H52C 2TC 43 2TC H51 H51 H 0 1 N N N 23.831 38.044 35.816 0.733 -1.722 0.191 H51 2TC 44 2TC H1B H1B H 0 1 N N N 21.774 37.861 33.576 0.564 1.079 -1.010 H1B 2TC 45 2TC H621 H621 H 0 0 N N N 22.849 39.128 37.690 1.823 -1.746 2.463 H621 2TC 46 2TC H622 H622 H 0 0 N N N 23.735 40.589 37.137 2.476 -0.236 3.143 H622 2TC 47 2TC H623 H623 H 0 0 N N N 21.963 40.666 37.420 0.715 -0.466 3.013 H623 2TC 48 2TC H8 H8 H 0 1 N N N 26.334 41.734 33.647 5.515 -2.223 -0.727 H8 2TC 49 2TC H9 H9 H 0 1 N N N 24.817 43.304 32.457 6.498 -0.019 -1.184 H9 2TC 50 2TC H10 H10 H 0 1 N N N 21.457 43.442 33.233 5.161 2.644 -1.493 H10 2TC 51 2TC H2B H2B H 0 1 N N N 23.523 38.368 33.423 1.526 -0.290 -1.622 H2B 2TC 52 2TC H1C H1C H 0 1 N N N 23.244 33.873 33.505 -3.072 -0.585 -2.935 H1C 2TC 53 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 2TC C1 O1 DOUB N N 1 2TC C1 C2 SING N N 2 2TC C1 C1C SING N N 3 2TC C2 C21 SING N N 4 2TC C2 C3 DOUB N N 5 2TC C21 N21 TRIP N N 6 2TC C3 O3 SING N N 7 2TC C3 C4 SING N N 8 2TC C4 N4 SING N N 9 2TC C4 C41 SING N N 10 2TC N4 C42 SING N N 11 2TC N4 C43 SING N N 12 2TC C41 C5 SING N N 13 2TC C41 C1C SING N N 14 2TC C5 C51 SING N N 15 2TC C51 C6 SING N N 16 2TC C51 C1B SING N N 17 2TC C6 C62 SING N N 18 2TC C6 O6 SING N N 19 2TC C6 C61 SING N N 20 2TC O6 C11 SING N N 21 2TC C61 C7 SING Y N 22 2TC C61 C1A DOUB Y N 23 2TC C7 C8 DOUB Y N 24 2TC C7 CL7 SING N N 25 2TC C8 C9 SING Y N 26 2TC C9 C10 DOUB Y N 27 2TC C10 O10 SING N N 28 2TC C10 C1A SING Y N 29 2TC C1A C11 SING N N 30 2TC O11 C11 DOUB N N 31 2TC C1B C12 SING N N 32 2TC C12 O12 DOUB N N 33 2TC C12 C1C SING N N 34 2TC C1C O1C SING N N 35 2TC O3 H3 SING N N 36 2TC C4 H4 SING N N 37 2TC C41 H41 SING N N 38 2TC C42 H421 SING N N 39 2TC C42 H422 SING N N 40 2TC C42 H423 SING N N 41 2TC C43 H431 SING N N 42 2TC C43 H432 SING N N 43 2TC C43 H433 SING N N 44 2TC C5 H51C SING N N 45 2TC C5 H52C SING N N 46 2TC C51 H51 SING N N 47 2TC C1B H1B SING N N 48 2TC C62 H621 SING N N 49 2TC C62 H622 SING N N 50 2TC C62 H623 SING N N 51 2TC C8 H8 SING N N 52 2TC C9 H9 SING N N 53 2TC O10 H10 SING N N 54 2TC C1B H2B SING N N 55 2TC O1C H1C SING N N 56 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 2TC SMILES ACDLabs 10.04 "O=C3CC(C2(OC(=O)c1c(O)ccc(Cl)c12)C)CC4C3(O)C(=O)C(C#N)=C(O)C4N(C)C" 2TC SMILES_CANONICAL CACTVS 3.352 "CN(C)[C@H]1[C@@H]2C[C@@H](CC(=O)[C@]2(O)C(=O)C(=C1O)C#N)[C@]3(C)OC(=O)c4c(O)ccc(Cl)c34" 2TC SMILES CACTVS 3.352 "CN(C)[CH]1[CH]2C[CH](CC(=O)[C]2(O)C(=O)C(=C1O)C#N)[C]3(C)OC(=O)c4c(O)ccc(Cl)c34" 2TC SMILES_CANONICAL "OpenEye OEToolkits" 1.6.1 "C[C@@]1(c2c(ccc(c2C(=O)O1)O)Cl)[C@H]3C[C@H]4[C@@H](C(=C(C(=O)[C@]4(C(=O)C3)O)C#N)O)N(C)C" 2TC SMILES "OpenEye OEToolkits" 1.6.1 "CC1(c2c(ccc(c2C(=O)O1)O)Cl)C3CC4C(C(=C(C(=O)C4(C(=O)C3)O)C#N)O)N(C)C" 2TC InChI InChI 1.03 "InChI=1S/C22H21ClN2O7/c1-21(16-12(23)4-5-13(26)15(16)20(30)32-21)9-6-11-17(25(2)3)18(28)10(8-24)19(29)22(11,31)14(27)7-9/h4-5,9,11,17,26,28,31H,6-7H2,1-3H3/t9-,11-,17-,21-,22-/m0/s1" 2TC InChIKey InChI 1.03 LLGMOYSDYFLOGF-REEKZYMCSA-N # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 2TC "SYSTEMATIC NAME" ACDLabs 10.04 "(4S,4aS,6S,8aS)-6-[(1S)-7-chloro-4-hydroxy-1-methyl-3-oxo-1,3-dihydro-2-benzofuran-1-yl]-4-(dimethylamino)-3,8a-dihydroxy-1,8-dioxo-1,4,4a,5,6,7,8,8a-octahydronaphthalene-2-carbonitrile" 2TC "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.6.1 "(4S,4aS,6S,8aS)-6-[(1S)-7-chloro-4-hydroxy-1-methyl-3-oxo-2-benzofuran-1-yl]-4-dimethylamino-3,8a-dihydroxy-1,8-dioxo-4a,5,6,7-tetrahydro-4H-naphthalene-2-carbonitrile" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 2TC "Create component" 2010-02-18 EBI 2TC "Modify aromatic_flag" 2011-06-04 RCSB 2TC "Modify descriptor" 2011-06-04 RCSB 2TC "Modify synonyms" 2021-03-01 PDBE # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id 2TC _pdbx_chem_comp_synonyms.name 7-CHLOR-2-CYANO-ISO-TETRACYCLINE _pdbx_chem_comp_synonyms.provenance ? _pdbx_chem_comp_synonyms.type ? ##