data_2VN # _chem_comp.id 2VN _chem_comp.name "2-[(4-{2-[(4-cyclohexylbutyl)(cyclohexylcarbamoyl)amino]ethyl}phenyl)sulfanyl]-2-methylpropanoic acid" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C29 H46 N2 O3 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2014-02-26 _chem_comp.pdbx_modified_date 2018-12-21 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 502.752 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 2VN _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 2ML0 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 2VN C26 C26 C 0 1 N N N 2.126 1.486 1.894 7.472 -0.556 0.317 C26 2VN 1 2VN C1 C1 C 0 1 N N N -5.892 -1.153 2.613 -4.573 4.282 1.335 C1 2VN 2 2VN C10 C10 C 0 1 N N N -3.799 3.444 0.053 -3.139 -0.704 -0.316 C10 2VN 3 2VN C11 C11 C 0 1 N N N -2.954 4.188 1.079 -4.056 -1.744 0.331 C11 2VN 4 2VN C12 C12 C 0 1 N N N -3.813 5.020 2.030 -4.909 -2.413 -0.748 C12 2VN 5 2VN C13 C13 C 0 1 N N N -4.623 6.096 1.289 -5.826 -3.453 -0.100 C13 2VN 6 2VN C14 C14 C 0 1 N N N -3.726 6.894 0.326 -4.979 -4.576 0.500 C14 2VN 7 2VN C15 C15 C 0 1 N N N -2.645 7.650 1.094 -5.896 -5.616 1.148 C15 2VN 8 2VN C16 C16 C 0 1 N N N -3.272 8.602 2.102 -6.836 -6.197 0.089 C16 2VN 9 2VN C17 C17 C 0 1 N N N -4.182 7.844 3.058 -7.683 -5.073 -0.511 C17 2VN 10 2VN C18 C18 C 0 1 N N N -5.255 7.080 2.287 -6.766 -4.033 -1.159 C18 2VN 11 2VN C19 C19 C 0 1 N N N -4.096 2.565 4.224 0.938 0.760 0.807 C19 2VN 12 2VN C2 C2 C 0 1 N N N -5.510 -1.419 1.140 -3.507 3.976 0.280 C2 2VN 13 2VN C20 C20 C 0 1 Y N N -2.606 2.272 4.112 2.309 0.361 0.326 C20 2VN 14 2VN C21 C21 C 0 1 Y N N -1.700 3.311 3.909 2.735 -0.948 0.466 C21 2VN 15 2VN C22 C22 C 0 1 Y N N -0.335 3.036 3.799 3.988 -1.319 0.022 C22 2VN 16 2VN C23 C23 C 0 1 Y N N 0.129 1.721 3.888 4.822 -0.376 -0.567 C23 2VN 17 2VN C24 C24 C 0 1 Y N N -0.786 0.689 4.093 4.391 0.938 -0.705 C24 2VN 18 2VN C25 C25 C 0 1 Y N N -2.147 0.962 4.207 3.136 1.302 -0.258 C25 2VN 19 2VN C27 C27 C 0 1 N N N 0.777 1.096 1.251 8.896 -0.927 -0.011 C27 2VN 20 2VN C28 C28 C 0 1 N N N 2.468 2.938 1.531 6.977 -1.414 1.482 C28 2VN 21 2VN C29 C29 C 0 1 N N N 3.239 0.583 1.382 7.407 0.922 0.707 C29 2VN 22 2VN C3 C3 C 0 1 N N N -4.889 -2.825 1.034 -4.102 4.167 -1.116 C3 2VN 23 2VN C4 C4 C 0 1 N N N -3.697 -2.975 1.965 -4.578 5.612 -1.276 C4 2VN 24 2VN C55 C55 C 0 1 N N N -4.124 -2.752 3.399 -5.643 5.918 -0.221 C55 2VN 25 2VN C6 C6 C 0 1 N N N -4.707 -1.363 3.560 -5.049 5.727 1.176 C6 2VN 26 2VN C7 C7 C 0 1 N N N -3.726 0.431 1.375 -1.826 2.235 0.003 C7 2VN 27 2VN C8 C8 C 0 1 N N N -4.915 1.849 3.135 -0.074 0.573 -0.324 C8 2VN 28 2VN C9 C9 C 0 1 N N N -4.874 2.574 0.718 -2.285 -0.034 0.763 C9 2VN 29 2VN N2 N2 N 0 1 N N N -4.262 1.750 1.796 -1.407 0.961 0.143 N2 2VN 30 2VN N1 N1 N 0 1 N N N -4.553 -0.397 0.587 -3.052 2.592 0.433 N1 2VN 31 2VN O2 O2 O 0 1 N N N 0.470 -0.231 1.224 9.854 -0.795 0.919 O2 2VN 32 2VN O1 O1 O 0 1 N N N -2.589 0.078 1.679 -1.097 3.061 -0.512 O1 2VN 33 2VN O3 O3 O 0 1 N N N -0.044 1.875 0.764 9.174 -1.343 -1.111 O3 2VN 34 2VN S1 S1 S 0 1 N N N 1.843 1.269 3.744 6.423 -0.844 -1.135 S1 2VN 35 2VN H2 H2 H 0 1 N N N -6.242 -0.114 2.707 -5.418 3.605 1.204 H2 2VN 36 2VN H1 H1 H 0 1 N N N -6.702 -1.840 2.900 -4.149 4.146 2.330 H1 2VN 37 2VN H18 H18 H 0 1 N N N -3.142 2.799 -0.548 -2.489 -1.194 -1.041 H18 2VN 38 2VN H17 H17 H 0 1 N N N -4.291 4.178 -0.602 -3.743 0.050 -0.821 H17 2VN 39 2VN H20 H20 H 0 1 N N N -2.381 3.455 1.666 -3.451 -2.497 0.836 H20 2VN 40 2VN H19 H19 H 0 1 N N N -2.260 4.857 0.550 -4.705 -1.254 1.057 H19 2VN 41 2VN H22 H22 H 0 1 N N N -4.510 4.351 2.555 -5.514 -1.659 -1.252 H22 2VN 42 2VN H21 H21 H 0 1 N N N -3.156 5.512 2.762 -4.260 -2.903 -1.473 H21 2VN 43 2VN H23 H23 H 0 1 N N N -5.422 5.608 0.712 -6.413 -2.980 0.687 H23 2VN 44 2VN H24 H24 H 0 1 N N N -4.344 7.614 -0.230 -4.392 -5.049 -0.287 H24 2VN 45 2VN H25 H25 H 0 1 N N N -3.248 6.200 -0.381 -4.309 -4.163 1.254 H25 2VN 46 2VN H26 H26 H 0 1 N N N -2.008 6.928 1.626 -5.292 -6.417 1.576 H26 2VN 47 2VN H27 H27 H 0 1 N N N -2.033 8.226 0.384 -6.483 -5.143 1.935 H27 2VN 48 2VN H28 H28 H 0 1 N N N -2.475 9.097 2.677 -6.249 -6.670 -0.698 H28 2VN 49 2VN H29 H29 H 0 1 N N N -3.862 9.360 1.566 -7.489 -6.938 0.551 H29 2VN 50 2VN H31 H31 H 0 1 N N N -3.580 7.132 3.642 -8.353 -5.487 -1.265 H31 2VN 51 2VN H30 H30 H 0 1 N N N -4.666 8.559 3.739 -8.270 -4.600 0.276 H30 2VN 52 2VN H32 H32 H 0 1 N N N -5.882 7.797 1.737 -7.370 -3.233 -1.587 H32 2VN 53 2VN H33 H33 H 0 1 N N N -5.878 6.519 2.999 -6.179 -4.506 -1.946 H33 2VN 54 2VN H35 H35 H 0 1 N N N -4.252 3.650 4.128 0.654 0.137 1.655 H35 2VN 55 2VN H34 H34 H 0 1 N N N -4.449 2.230 5.210 0.951 1.806 1.114 H34 2VN 56 2VN H3 H3 H 0 1 N N N -6.430 -1.402 0.538 -2.663 4.653 0.411 H3 2VN 57 2VN HK6 HK6 H 0 1 N N N -2.053 4.329 3.837 2.086 -1.680 0.924 HK6 2VN 58 2VN HL7 HL7 H 0 1 N N N 0.365 3.844 3.644 4.320 -2.341 0.131 HL7 2VN 59 2VN HL8 HL8 H 0 1 N N N -0.436 -0.330 4.164 5.037 1.674 -1.162 HL8 2VN 60 2VN HK9 HK9 H 0 1 N N N -2.847 0.156 4.369 2.799 2.322 -0.370 HK9 2VN 61 2VN HJ2 HJ2 H 0 1 N N N 3.429 3.215 1.989 6.927 -2.458 1.170 HJ2 2VN 62 2VN HJ1 HJ1 H 0 1 N N N 2.542 3.035 0.438 7.665 -1.319 2.322 HJ1 2VN 63 2VN HJ0 HJ0 H 0 1 N N N 1.678 3.605 1.905 5.985 -1.079 1.785 HJ0 2VN 64 2VN HJ4 HJ4 H 0 1 N N N 4.192 0.874 1.849 6.398 1.166 1.039 HJ4 2VN 65 2VN HJ5 HJ5 H 0 1 N N N 3.010 -0.462 1.637 8.112 1.115 1.516 HJ5 2VN 66 2VN HJ3 HJ3 H 0 1 N N N 3.320 0.685 0.290 7.665 1.537 -0.154 HJ3 2VN 67 2VN H4 H4 H 0 1 N N N -5.649 -3.573 1.302 -3.343 3.949 -1.867 H4 2VN 68 2VN H5 H5 H 0 1 N N N -4.558 -2.993 -0.001 -4.947 3.490 -1.247 H5 2VN 69 2VN H7 H7 H 0 1 N N N -3.281 -3.988 1.863 -3.733 6.289 -1.145 H7 2VN 70 2VN H6 H6 H 0 1 N N N -2.929 -2.235 1.695 -5.002 5.748 -2.270 H6 2VN 71 2VN H9 H9 H 0 1 N N N -4.884 -3.499 3.673 -5.982 6.947 -0.335 H9 2VN 72 2VN H8 H8 H 0 1 N N N -3.251 -2.858 4.059 -6.488 5.241 -0.352 H8 2VN 73 2VN H11 H11 H 0 1 N N N -3.930 -0.618 3.334 -5.808 5.945 1.927 H11 2VN 74 2VN H10 H10 H 0 1 N N N -5.048 -1.234 4.598 -4.204 6.404 1.306 H10 2VN 75 2VN H14 H14 H 0 1 N N N -5.862 2.395 3.010 0.209 1.196 -1.173 H14 2VN 76 2VN H13 H13 H 0 1 N N N -5.124 0.828 3.486 -0.087 -0.473 -0.631 H13 2VN 77 2VN H16 H16 H 0 1 N N N -5.651 3.221 1.150 -2.935 0.455 1.488 H16 2VN 78 2VN H15 H15 H 0 1 N N N -5.325 1.912 -0.036 -1.681 -0.788 1.267 H15 2VN 79 2VN H12 H12 H 0 1 N N N -4.500 -0.298 -0.407 -3.634 1.933 0.843 H12 2VN 80 2VN H36 H36 H 0 1 N N N -0.377 -0.352 0.810 10.752 -1.046 0.663 H36 2VN 81 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 2VN C10 C9 SING N N 1 2VN C10 C11 SING N N 2 2VN C14 C15 SING N N 3 2VN C14 C13 SING N N 4 2VN N1 C2 SING N N 5 2VN N1 C7 SING N N 6 2VN C9 N2 SING N N 7 2VN O3 C27 DOUB N N 8 2VN C3 C2 SING N N 9 2VN C3 C4 SING N N 10 2VN C11 C12 SING N N 11 2VN C15 C16 SING N N 12 2VN C2 C1 SING N N 13 2VN O2 C27 SING N N 14 2VN C27 C26 SING N N 15 2VN C13 C12 SING N N 16 2VN C13 C18 SING N N 17 2VN C7 O1 DOUB N N 18 2VN C7 N2 SING N N 19 2VN C29 C26 SING N N 20 2VN C28 C26 SING N N 21 2VN N2 C8 SING N N 22 2VN C26 S1 SING N N 23 2VN C4 C55 SING N N 24 2VN C16 C17 SING N N 25 2VN C18 C17 SING N N 26 2VN C1 C6 SING N N 27 2VN C8 C19 SING N N 28 2VN C55 C6 SING N N 29 2VN S1 C23 SING N N 30 2VN C22 C23 DOUB Y N 31 2VN C22 C21 SING Y N 32 2VN C23 C24 SING Y N 33 2VN C21 C20 DOUB Y N 34 2VN C24 C25 DOUB Y N 35 2VN C20 C25 SING Y N 36 2VN C20 C19 SING N N 37 2VN C1 H2 SING N N 38 2VN C1 H1 SING N N 39 2VN C10 H18 SING N N 40 2VN C10 H17 SING N N 41 2VN C11 H20 SING N N 42 2VN C11 H19 SING N N 43 2VN C12 H22 SING N N 44 2VN C12 H21 SING N N 45 2VN C13 H23 SING N N 46 2VN C14 H24 SING N N 47 2VN C14 H25 SING N N 48 2VN C15 H26 SING N N 49 2VN C15 H27 SING N N 50 2VN C16 H28 SING N N 51 2VN C16 H29 SING N N 52 2VN C17 H31 SING N N 53 2VN C17 H30 SING N N 54 2VN C18 H32 SING N N 55 2VN C18 H33 SING N N 56 2VN C19 H35 SING N N 57 2VN C19 H34 SING N N 58 2VN C2 H3 SING N N 59 2VN C21 HK6 SING N N 60 2VN C22 HL7 SING N N 61 2VN C24 HL8 SING N N 62 2VN C25 HK9 SING N N 63 2VN C28 HJ2 SING N N 64 2VN C28 HJ1 SING N N 65 2VN C28 HJ0 SING N N 66 2VN C29 HJ4 SING N N 67 2VN C29 HJ5 SING N N 68 2VN C29 HJ3 SING N N 69 2VN C3 H4 SING N N 70 2VN C3 H5 SING N N 71 2VN C4 H7 SING N N 72 2VN C4 H6 SING N N 73 2VN C55 H9 SING N N 74 2VN C55 H8 SING N N 75 2VN C6 H11 SING N N 76 2VN C6 H10 SING N N 77 2VN C8 H14 SING N N 78 2VN C8 H13 SING N N 79 2VN C9 H16 SING N N 80 2VN C9 H15 SING N N 81 2VN N1 H12 SING N N 82 2VN O2 H36 SING N N 83 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 2VN SMILES ACDLabs 12.01 "O=C(NC1CCCCC1)N(CCc2ccc(SC(C(=O)O)(C)C)cc2)CCCCC3CCCCC3" 2VN InChI InChI 1.03 "InChI=1S/C29H46N2O3S/c1-29(2,27(32)33)35-26-18-16-24(17-19-26)20-22-31(28(34)30-25-14-7-4-8-15-25)21-10-9-13-23-11-5-3-6-12-23/h16-19,23,25H,3-15,20-22H2,1-2H3,(H,30,34)(H,32,33)" 2VN InChIKey InChI 1.03 PKNYXWMTHFMHKD-UHFFFAOYSA-N 2VN SMILES_CANONICAL CACTVS 3.385 "CC(C)(Sc1ccc(CCN(CCCCC2CCCCC2)C(=O)NC3CCCCC3)cc1)C(O)=O" 2VN SMILES CACTVS 3.385 "CC(C)(Sc1ccc(CCN(CCCCC2CCCCC2)C(=O)NC3CCCCC3)cc1)C(O)=O" 2VN SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "CC(C)(C(=O)O)Sc1ccc(cc1)CCN(CCCCC2CCCCC2)C(=O)NC3CCCCC3" 2VN SMILES "OpenEye OEToolkits" 1.7.6 "CC(C)(C(=O)O)Sc1ccc(cc1)CCN(CCCCC2CCCCC2)C(=O)NC3CCCCC3" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 2VN "SYSTEMATIC NAME" ACDLabs 12.01 "2-[(4-{2-[(4-cyclohexylbutyl)(cyclohexylcarbamoyl)amino]ethyl}phenyl)sulfanyl]-2-methylpropanoic acid" 2VN "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "2-[4-[2-[4-cyclohexylbutyl(cyclohexylcarbamoyl)amino]ethyl]phenyl]sulfanyl-2-methyl-propanoic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 2VN "Create component" 2014-02-26 RCSB 2VN "Initial release" 2018-12-26 RCSB #