data_2VZ # _chem_comp.id 2VZ _chem_comp.name "(2E,4E,6Z,8E)-3,7-dimethyl-8-(6-methyl-3,4-dihydronaphthalen-1(2H)-ylidene)octa-2,4,6-trienoic acid" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C21 H24 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2014-02-28 _chem_comp.pdbx_modified_date 2014-06-13 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 308.414 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 2VZ _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 4PP3 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 2VZ "C2'" "C2'" C 0 1 N N N 66.368 46.777 29.587 -2.198 -2.126 -0.988 "C2'" 2VZ 1 2VZ "C1'" "C1'" C 0 1 N N N 67.229 45.789 30.377 -2.542 -1.337 -2.259 "C1'" 2VZ 2 2VZ C18 C18 C 0 1 N N N 67.731 46.435 31.672 -3.819 -0.534 -2.026 C18 2VZ 3 2VZ C5 C5 C 0 1 Y N N 66.615 47.071 32.503 -3.698 0.340 -0.809 C5 2VZ 4 2VZ C4 C4 C 0 1 Y N N 66.714 47.080 33.898 -4.512 1.453 -0.696 C4 2VZ 5 2VZ C3 C3 C 0 1 Y N N 65.719 47.637 34.692 -4.425 2.272 0.415 C3 2VZ 6 2VZ "C6'" "C6'" C 0 1 N N N 65.851 47.630 36.219 -5.318 3.481 0.523 "C6'" 2VZ 7 2VZ C2 C2 C 0 1 Y N N 64.614 48.207 34.068 -3.524 1.991 1.428 C2 2VZ 8 2VZ C1 C1 C 0 1 Y N N 64.506 48.228 32.695 -2.704 0.887 1.332 C1 2VZ 9 2VZ C6 C6 C 0 1 Y N N 65.518 47.642 31.900 -2.786 0.055 0.210 C6 2VZ 10 2VZ C7 C7 C 0 1 N N N 65.406 47.592 30.459 -1.901 -1.119 0.103 C7 2VZ 11 2VZ C8 C8 C 0 1 N N N 64.387 48.310 29.837 -0.859 -1.291 0.952 C8 2VZ 12 2VZ C9 C9 C 0 1 N N N 64.118 48.320 28.385 -0.120 -2.490 0.925 C9 2VZ 13 2VZ C19 C19 C 0 1 N N N 65.226 48.789 27.438 -0.811 -3.807 1.165 C19 2VZ 14 2VZ C10 C10 C 0 1 N N N 62.880 47.963 27.900 1.221 -2.458 0.681 C10 2VZ 15 2VZ C11 C11 C 0 1 N N N 61.751 47.578 28.775 1.864 -1.230 0.458 C11 2VZ 16 2VZ C12 C12 C 0 1 N N N 60.597 47.008 28.261 3.207 -1.199 0.214 C12 2VZ 17 2VZ C13 C13 C 0 1 N N N 59.490 46.641 29.158 3.851 0.028 -0.009 C13 2VZ 18 2VZ C20 C20 C 0 1 N N N 59.775 45.886 30.460 3.059 1.311 0.020 C20 2VZ 19 2VZ C14 C14 C 0 1 N N N 58.199 46.980 28.772 5.192 0.060 -0.253 C14 2VZ 20 2VZ C15 C15 C 0 1 N N N 56.987 46.706 29.548 5.870 1.296 -0.305 C15 2VZ 21 2VZ O1 O1 O 0 1 N N N 56.956 45.729 30.327 7.184 1.332 -0.615 O1 2VZ 22 2VZ O2 O2 O 0 1 N N N 56.020 47.484 29.373 5.270 2.329 -0.072 O2 2VZ 23 2VZ H1 H1 H 0 1 N N N 67.035 47.475 29.061 -3.045 -2.748 -0.698 H1 2VZ 24 2VZ H2 H2 H 0 1 N N N 65.776 46.211 28.852 -1.322 -2.750 -1.165 H2 2VZ 25 2VZ H3 H3 H 0 1 N N N 66.628 44.901 30.624 -1.724 -0.658 -2.498 H3 2VZ 26 2VZ H4 H4 H 0 1 N N N 68.091 45.489 29.764 -2.694 -2.030 -3.087 H4 2VZ 27 2VZ H5 H5 H 0 1 N N N 68.222 45.661 32.281 -4.011 0.091 -2.898 H5 2VZ 28 2VZ H6 H6 H 0 1 N N N 68.461 47.216 31.413 -4.654 -1.222 -1.891 H6 2VZ 29 2VZ H7 H7 H 0 1 N N N 67.583 46.644 34.369 -5.219 1.683 -1.479 H7 2VZ 30 2VZ H8 H8 H 0 1 N N N 66.370 48.543 36.547 -6.245 3.204 1.025 H8 2VZ 31 2VZ H9 H9 H 0 1 N N N 64.850 47.595 36.673 -4.811 4.257 1.098 H9 2VZ 32 2VZ H10 H10 H 0 1 N N N 66.428 46.747 36.533 -5.543 3.858 -0.475 H10 2VZ 33 2VZ H11 H11 H 0 1 N N N 63.828 48.640 34.670 -3.463 2.636 2.292 H11 2VZ 34 2VZ H12 H12 H 0 1 N N N 63.650 48.691 32.227 -2.000 0.664 2.121 H12 2VZ 35 2VZ H13 H13 H 0 1 N N N 63.743 48.906 30.466 -0.596 -0.510 1.649 H13 2VZ 36 2VZ H14 H14 H 0 1 N N N 66.130 49.025 28.019 -1.076 -4.258 0.208 H14 2VZ 37 2VZ H15 H15 H 0 1 N N N 65.453 47.991 26.715 -0.142 -4.475 1.708 H15 2VZ 38 2VZ H16 H16 H 0 1 N N N 64.891 49.688 26.899 -1.715 -3.642 1.751 H16 2VZ 39 2VZ H17 H17 H 0 1 N N N 62.726 47.964 26.831 1.788 -3.377 0.660 H17 2VZ 40 2VZ H18 H18 H 0 1 N N N 61.828 47.745 29.839 1.297 -0.312 0.479 H18 2VZ 41 2VZ H19 H19 H 0 1 N N N 60.510 46.833 27.199 3.774 -2.117 0.193 H19 2VZ 42 2VZ H20 H20 H 0 1 N N N 58.830 45.702 30.992 3.134 1.761 1.009 H20 2VZ 43 2VZ H21 H21 H 0 1 N N N 60.258 44.925 30.228 3.458 2.000 -0.725 H21 2VZ 44 2VZ H22 H22 H 0 1 N N N 60.442 46.488 31.095 2.014 1.098 -0.205 H22 2VZ 45 2VZ H23 H23 H 0 1 N N N 58.080 47.485 27.825 5.735 -0.861 -0.405 H23 2VZ 46 2VZ H24 H24 H 0 1 N N N 56.104 45.684 30.745 7.560 2.223 -0.626 H24 2VZ 47 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 2VZ C19 C9 SING N N 1 2VZ C10 C9 DOUB N Z 2 2VZ C10 C11 SING N N 3 2VZ C12 C11 DOUB N E 4 2VZ C12 C13 SING N N 5 2VZ C9 C8 SING N N 6 2VZ C14 C13 DOUB N E 7 2VZ C14 C15 SING N N 8 2VZ C13 C20 SING N N 9 2VZ O2 C15 DOUB N N 10 2VZ C15 O1 SING N N 11 2VZ "C2'" "C1'" SING N N 12 2VZ "C2'" C7 SING N N 13 2VZ C8 C7 DOUB N E 14 2VZ "C1'" C18 SING N N 15 2VZ C7 C6 SING N N 16 2VZ C18 C5 SING N N 17 2VZ C6 C5 DOUB Y N 18 2VZ C6 C1 SING Y N 19 2VZ C5 C4 SING Y N 20 2VZ C1 C2 DOUB Y N 21 2VZ C4 C3 DOUB Y N 22 2VZ C2 C3 SING Y N 23 2VZ C3 "C6'" SING N N 24 2VZ "C2'" H1 SING N N 25 2VZ "C2'" H2 SING N N 26 2VZ "C1'" H3 SING N N 27 2VZ "C1'" H4 SING N N 28 2VZ C18 H5 SING N N 29 2VZ C18 H6 SING N N 30 2VZ C4 H7 SING N N 31 2VZ "C6'" H8 SING N N 32 2VZ "C6'" H9 SING N N 33 2VZ "C6'" H10 SING N N 34 2VZ C2 H11 SING N N 35 2VZ C1 H12 SING N N 36 2VZ C8 H13 SING N N 37 2VZ C19 H14 SING N N 38 2VZ C19 H15 SING N N 39 2VZ C19 H16 SING N N 40 2VZ C10 H17 SING N N 41 2VZ C11 H18 SING N N 42 2VZ C12 H19 SING N N 43 2VZ C20 H20 SING N N 44 2VZ C20 H21 SING N N 45 2VZ C20 H22 SING N N 46 2VZ C14 H23 SING N N 47 2VZ O1 H24 SING N N 48 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 2VZ SMILES ACDLabs 12.01 "O=C(O)\C=C(\C=C\C=C(/C=C2/c1ccc(cc1CCC2)C)C)C" 2VZ InChI InChI 1.03 "InChI=1S/C21H24O2/c1-15(6-4-7-16(2)14-21(22)23)12-18-8-5-9-19-13-17(3)10-11-20(18)19/h4,6-7,10-14H,5,8-9H2,1-3H3,(H,22,23)/b7-4+,15-6-,16-14+,18-12+" 2VZ InChIKey InChI 1.03 KHXSEEGTXMJURJ-JUPRZYRNSA-N 2VZ SMILES_CANONICAL CACTVS 3.385 "CC(/C=C/C=C(C)\C=C1/CCCc2cc(C)ccc12)=C\C(O)=O" 2VZ SMILES CACTVS 3.385 "CC(C=CC=C(C)C=C1CCCc2cc(C)ccc12)=CC(O)=O" 2VZ SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "Cc1ccc\2c(c1)CCC/C2=C\C(=C/C=C/C(=C/C(=O)O)/C)\C" 2VZ SMILES "OpenEye OEToolkits" 1.7.6 "Cc1ccc2c(c1)CCCC2=CC(=CC=CC(=CC(=O)O)C)C" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 2VZ "SYSTEMATIC NAME" ACDLabs 12.01 "(2E,4E,6Z,8E)-3,7-dimethyl-8-(6-methyl-3,4-dihydronaphthalen-1(2H)-ylidene)octa-2,4,6-trienoic acid" 2VZ "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "(2E,4E,6Z,8E)-3,7-dimethyl-8-(6-methyl-3,4-dihydro-2H-naphthalen-1-ylidene)octa-2,4,6-trienoic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 2VZ "Create component" 2014-02-28 RCSB 2VZ "Initial release" 2014-06-18 RCSB #