data_2X3 # _chem_comp.id 2X3 _chem_comp.name ;(8S)-3',8-cyclo-7,8-dihydroguanosine 5'-triphosphate ; _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C10 H16 N5 O14 P3" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2014-04-01 _chem_comp.pdbx_modified_date 2015-04-24 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 523.180 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 2X3 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 4PYF _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 2X3 C2 C2 C 0 1 N N N -4.091 114.158 127.677 -6.313 -2.675 -0.551 C2 2X3 1 2X3 C4 C4 C 0 1 N N N -6.008 115.062 126.708 -4.808 -0.915 -0.501 C4 2X3 2 2X3 C5 C5 C 0 1 N N N -5.461 116.293 126.647 -5.425 -0.417 0.649 C5 2X3 3 2X3 C6 C6 C 0 1 N N N -4.204 116.495 127.071 -6.549 -1.078 1.153 C6 2X3 4 2X3 C8 C8 C 0 1 N N S -7.536 116.412 125.670 -3.484 0.730 0.327 C8 2X3 5 2X3 O6 O6 O 0 1 N N N -3.683 117.616 126.993 -7.129 -0.652 2.140 O6 2X3 6 2X3 OBD OBD O 0 1 N N N -13.982 112.590 121.317 6.835 -2.503 -0.803 OBD 2X3 7 2X3 PBC PBC P 0 1 N N N -14.878 113.607 120.744 6.979 -0.900 -0.847 PBC 2X3 8 2X3 OBE OBE O 0 1 N N N -14.687 113.995 119.336 7.902 -0.459 0.223 OBE 2X3 9 2X3 OBF OBF O 0 1 N N N -16.205 113.802 121.350 7.565 -0.454 -2.279 OBF 2X3 10 2X3 OAZ OAZ O 0 1 N N N -14.167 114.901 121.394 5.535 -0.225 -0.623 OAZ 2X3 11 2X3 PAY PAY P 0 1 N N N -14.223 115.181 122.981 4.630 0.077 0.674 PAY 2X3 12 2X3 OBA OBA O 0 1 N N N -15.045 116.385 123.225 4.717 -1.065 1.612 OBA 2X3 13 2X3 OBB OBB O 0 1 N N N -14.540 113.927 123.700 5.163 1.411 1.401 OBB 2X3 14 2X3 OAV OAV O 0 1 N N N -12.689 115.554 123.296 3.099 0.287 0.223 OAV 2X3 15 2X3 PAU PAU P 0 1 N N N -11.537 114.454 123.082 1.695 0.309 1.010 PAU 2X3 16 2X3 OAW OAW O 0 1 N N N -11.465 114.109 121.645 1.831 1.124 2.238 OAW 2X3 17 2X3 OAX OAX O 0 1 N N N -11.713 113.380 124.083 1.277 -1.194 1.406 OAX 2X3 18 2X3 OAT OAT O 0 1 N N N -10.199 115.302 123.455 0.560 0.950 0.064 OAT 2X3 19 2X3 CAR CAR C 0 1 N N N -10.251 116.447 124.328 -0.773 1.204 0.511 CAR 2X3 20 2X3 CAP CAP C 0 1 N N R -10.024 115.992 125.776 -1.587 1.812 -0.633 CAP 2X3 21 2X3 OAO OAO O 0 1 N N N -9.588 114.623 125.824 -1.788 0.845 -1.686 OAO 2X3 22 2X3 CAN CAN C 0 1 N N R -8.543 114.599 126.812 -3.199 0.751 -1.992 CAN 2X3 23 2X3 N9 N9 N 0 1 N N N -7.270 115.140 126.339 -3.881 0.011 -0.909 N9 2X3 24 2X3 N3 N3 N 0 1 N N N -5.358 114.025 127.250 -5.260 -2.056 -1.035 N3 2X3 25 2X3 N2 N2 N 0 1 N N N -3.446 113.109 128.178 -6.739 -3.837 -1.143 N2 2X3 26 2X3 N1 N1 N 0 1 N N N -3.477 115.409 127.591 -6.987 -2.192 0.529 N1 2X3 27 2X3 N7 N7 N 0 1 N N N -6.349 117.159 126.130 -4.695 0.701 1.133 N7 2X3 28 2X3 CAL CAL C 0 1 N N S -8.851 116.711 126.439 -3.054 2.139 -0.160 CAL 2X3 29 2X3 OAS OAS O 0 1 N N N -9.123 118.114 126.665 -3.249 3.240 0.730 OAS 2X3 30 2X3 CAM CAM C 0 1 N N R -8.751 115.869 127.669 -3.698 2.196 -1.597 CAM 2X3 31 2X3 OAQ OAQ O 0 1 N N N -9.969 115.875 128.419 -3.119 3.216 -2.414 OAQ 2X3 32 2X3 H2 H2 H 0 1 N N N -7.661 116.356 124.579 -2.668 0.215 0.834 H2 2X3 33 2X3 H3 H3 H 0 1 N N N -13.362 112.305 120.656 6.243 -2.864 -1.478 H3 2X3 34 2X3 H4 H4 H 0 1 N N N -16.795 114.176 120.707 8.435 -0.825 -2.481 H4 2X3 35 2X3 H5 H5 H 0 1 N N N -15.288 114.068 124.269 5.135 2.201 0.844 H5 2X3 36 2X3 H6 H6 H 0 1 N N N -11.761 112.540 123.642 1.170 -1.786 0.649 H6 2X3 37 2X3 H7 H7 H 0 1 N N N -9.467 117.164 124.041 -1.235 0.269 0.828 H7 2X3 38 2X3 H8 H8 H 0 1 N N N -11.237 116.928 124.244 -0.749 1.900 1.349 H8 2X3 39 2X3 H9 H9 H 0 1 N N N -10.941 116.142 126.365 -1.097 2.705 -1.020 H9 2X3 40 2X3 H10 H10 H 0 1 N N N -8.468 113.674 127.403 -3.431 0.428 -3.007 H10 2X3 41 2X3 H11 H11 H 0 1 N N N -3.904 112.222 128.237 -6.264 -4.193 -1.910 H11 2X3 42 2X3 H12 H12 H 0 1 N N N -2.503 113.207 128.496 -7.515 -4.303 -0.794 H12 2X3 43 2X3 H13 H13 H 0 1 N N N -5.936 117.641 125.357 -4.949 1.311 1.844 H13 2X3 44 2X3 H15 H15 H 0 1 N N N -9.941 118.206 127.139 -2.962 4.091 0.371 H15 2X3 45 2X3 H16 H16 H 0 1 N N N -7.861 116.105 128.271 -4.785 2.266 -1.564 H16 2X3 46 2X3 H17 H17 H 0 1 N N N -10.030 116.681 128.919 -3.333 3.136 -3.354 H17 2X3 47 2X3 H18 H18 H 0 1 N N N -2.532 115.531 127.895 -7.782 -2.648 0.849 H18 2X3 48 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 2X3 C2 N2 SING N N 1 2X3 C4 N3 SING N N 2 2X3 C5 C4 DOUB N N 3 2X3 C5 C6 SING N N 4 2X3 C6 N1 SING N N 5 2X3 C8 N7 SING N N 6 2X3 C8 N9 SING N N 7 2X3 C8 CAL SING N N 8 2X3 C8 H2 SING N N 9 2X3 O6 C6 DOUB N N 10 2X3 OBD H3 SING N N 11 2X3 PBC OBD SING N N 12 2X3 PBC OBF SING N N 13 2X3 PBC OAZ SING N N 14 2X3 OBE PBC DOUB N N 15 2X3 OBF H4 SING N N 16 2X3 OAZ PAY SING N N 17 2X3 PAY OBA DOUB N N 18 2X3 PAY OAV SING N N 19 2X3 PAY OBB SING N N 20 2X3 OBB H5 SING N N 21 2X3 PAU OAV SING N N 22 2X3 PAU OAT SING N N 23 2X3 PAU OAX SING N N 24 2X3 OAW PAU DOUB N N 25 2X3 OAX H6 SING N N 26 2X3 OAT CAR SING N N 27 2X3 CAR CAP SING N N 28 2X3 CAR H7 SING N N 29 2X3 CAR H8 SING N N 30 2X3 CAP OAO SING N N 31 2X3 CAP CAL SING N N 32 2X3 CAP H9 SING N N 33 2X3 OAO CAN SING N N 34 2X3 CAN CAM SING N N 35 2X3 CAN H10 SING N N 36 2X3 N9 C4 SING N N 37 2X3 N9 CAN SING N N 38 2X3 N3 C2 DOUB N N 39 2X3 N2 H11 SING N N 40 2X3 N2 H12 SING N N 41 2X3 N1 C2 SING N N 42 2X3 N7 C5 SING N N 43 2X3 N7 H13 SING N N 44 2X3 CAL OAS SING N N 45 2X3 CAL CAM SING N N 46 2X3 OAS H15 SING N N 47 2X3 CAM OAQ SING N N 48 2X3 CAM H16 SING N N 49 2X3 OAQ H17 SING N N 50 2X3 N1 H18 SING N N 51 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 2X3 InChI InChI 1.03 "InChI=1S/C10H16N5O14P3/c11-9-13-5-3(6(17)14-9)12-8-10(18)2(27-7(4(10)16)15(5)8)1-26-31(22,23)29-32(24,25)28-30(19,20)21/h2,4,7-8,12,16,18H,1H2,(H,22,23)(H,24,25)(H2,19,20,21)(H3,11,13,14,17)/t2-,4+,7-,8+,10-/m1/s1" 2X3 InChIKey InChI 1.03 HRBCPXBJAWPPIC-FKPGNCNUSA-N 2X3 SMILES_CANONICAL CACTVS 3.370 "NC1=NC2=C(N[C@H]3N2[C@@H]4O[C@H](CO[P](O)(=O)O[P](O)(=O)O[P](O)(O)=O)[C@@]3(O)[C@H]4O)C(=O)N1" 2X3 SMILES CACTVS 3.370 "NC1=NC2=C(N[CH]3N2[CH]4O[CH](CO[P](O)(=O)O[P](O)(=O)O[P](O)(O)=O)[C]3(O)[CH]4O)C(=O)N1" 2X3 SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "C(C1C2(C(C(O1)N3C2NC4=C3N=C(NC4=O)N)O)O)OP(=O)(O)OP(=O)(O)OP(=O)(O)O" 2X3 SMILES "OpenEye OEToolkits" 1.7.6 "C(C1C2(C(C(O1)N3C2NC4=C3N=C(NC4=O)N)O)O)OP(=O)(O)OP(=O)(O)OP(=O)(O)O" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 2X3 "Create component" 2014-04-01 RCSB 2X3 "Initial release" 2015-04-29 RCSB #