data_2Y4 # _chem_comp.id 2Y4 _chem_comp.name ;N-[(2S)-1-[[(2S)-1-[[(2S,3R)-1-cyclohexyl-4,4-difluoro-3-hydroxy-5-(methylamino)-5-oxo-pentan-2-yl]amino]-1-oxo-hexan-2 -yl]amino]-1-oxo-3-phenyl-propan-2-yl]morpholine-4-carboxamide ; _chem_comp.type peptide-like _chem_comp.pdbx_type HETAIN _chem_comp.formula "C32 H49 F2 N5 O6" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "CP-81,198" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2010-11-09 _chem_comp.pdbx_modified_date 2020-06-17 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 637.758 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 2Y4 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 1FQ8 _chem_comp.pdbx_subcomponent_list "MOR PHE NLE MI0" _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 2Y4 O1 O1 O 0 1 N N N -22.266 59.971 30.024 8.568 2.291 1.380 O1 MOR 1 2Y4 C4 C4 C 0 1 N N N -21.169 59.448 30.799 7.268 2.347 1.972 C2 MOR 2 2Y4 C3 C3 C 0 1 N N N -20.925 60.165 32.010 6.635 0.951 1.932 C3 MOR 3 2Y4 N1 N1 N 0 1 N N N -21.700 61.343 32.329 6.703 0.450 0.551 N4 MOR 4 2Y4 C2 C2 C 0 1 N N N -22.436 62.007 31.277 8.001 0.501 -0.140 C5 MOR 5 2Y4 C1 C1 C 0 1 N N N -22.210 61.414 29.983 8.568 1.919 -0.000 C6 MOR 6 2Y4 C5 C5 C 0 1 N N N -21.331 62.044 33.440 5.609 -0.043 -0.064 C MOR 7 2Y4 O2 O2 O 0 1 N N N -21.646 63.226 33.635 5.704 -0.536 -1.171 O MOR 8 2Y4 N2 N2 N 0 1 N N N -20.780 61.344 34.436 4.410 0.012 0.550 N PHE 9 2Y4 C6 C6 C 0 1 N N S -20.585 61.987 35.726 3.206 -0.433 -0.156 CA PHE 10 2Y4 C7 C7 C 0 1 N N N -19.343 62.877 35.715 2.000 0.261 0.422 C PHE 11 2Y4 O3 O3 O 0 1 N N N -18.305 62.572 35.143 2.133 1.050 1.333 O PHE 12 2Y4 C8 C8 C 0 1 N N N -20.464 60.952 36.846 3.050 -1.947 0.007 CB PHE 13 2Y4 C9 C9 C 0 1 Y N N -21.664 60.076 37.035 4.195 -2.647 -0.679 CG PHE 14 2Y4 C10 C10 C 0 1 Y N N -21.730 58.825 36.444 4.088 -3.006 -2.010 CD1 PHE 15 2Y4 C11 C11 C 0 1 Y N N -22.742 60.473 37.807 5.354 -2.924 0.021 CD2 PHE 16 2Y4 C12 C12 C 0 1 Y N N -22.830 58.013 36.619 5.139 -3.648 -2.638 CE1 PHE 17 2Y4 C13 C13 C 0 1 Y N N -23.860 59.674 38.006 6.404 -3.566 -0.608 CE2 PHE 18 2Y4 C14 C14 C 0 1 Y N N -23.898 58.427 37.397 6.296 -3.930 -1.937 CZ PHE 19 2Y4 N3 N3 N 0 1 N N N -19.533 63.990 36.402 0.773 0.005 -0.074 N NLE 20 2Y4 C15 C15 C 0 1 N N S -18.503 64.980 36.663 -0.399 0.681 0.488 CA NLE 21 2Y4 C16 C16 C 0 1 N N N -18.455 65.239 38.186 -1.627 -0.159 0.244 C NLE 22 2Y4 O4 O4 O 0 1 N N N -19.338 65.968 38.645 -1.532 -1.217 -0.341 O NLE 23 2Y4 C17 C17 C 0 1 N N N -18.839 66.300 35.948 -0.573 2.045 -0.184 CB NLE 24 2Y4 C18 C18 C 0 1 N N N -17.546 67.116 35.874 0.617 2.940 0.167 CG NLE 25 2Y4 C19 C19 C 0 1 N N N -17.750 68.537 35.400 0.443 4.304 -0.504 CD NLE 26 2Y4 C20 C20 C 0 1 N N N -16.375 69.174 35.664 1.633 5.200 -0.153 CE NLE 27 2Y4 F1 F1 F 0 1 N N N -15.800 67.308 39.273 -3.767 2.154 -0.564 F1 MI0 28 2Y4 F2 F2 F 0 1 N N N -14.287 67.312 40.685 -4.920 0.879 -2.069 F2 MI0 29 2Y4 N4 N4 N 0 1 N N N -17.416 64.802 38.888 -2.831 0.266 0.677 N1 MI0 30 2Y4 N5 N5 N 0 1 N N N -15.652 68.532 42.361 -5.886 3.759 -1.285 N2 MI0 31 2Y4 O5 O5 O 0 1 N N N -14.739 64.715 40.095 -5.411 1.107 1.525 O1 MI0 32 2Y4 O6 O6 O 0 1 N N N -17.210 68.522 40.784 -7.192 2.205 -0.390 O2 MI0 33 2Y4 C21 C21 C 0 1 N N S -17.182 64.899 40.304 -4.038 -0.495 0.346 C1 MI0 34 2Y4 C22 C22 C 0 1 N N N -17.445 63.537 40.990 -4.293 -1.543 1.431 C2 MI0 35 2Y4 C23 C23 C 0 1 N N N -18.788 62.897 40.743 -5.470 -2.429 1.017 C3 MI0 36 2Y4 C24 C24 C 0 1 N N N -19.975 63.730 41.202 -5.817 -3.383 2.162 C4 MI0 37 2Y4 C25 C25 C 0 1 N N N -18.805 61.447 41.222 -5.087 -3.239 -0.223 C5 MI0 38 2Y4 C26 C26 C 0 1 N N N -21.271 63.008 40.792 -6.994 -4.269 1.748 C6 MI0 39 2Y4 C27 C27 C 0 1 N N N -20.124 60.749 40.920 -6.264 -4.125 -0.637 C7 MI0 40 2Y4 C28 C28 C 0 1 N N N -21.292 61.603 41.410 -6.611 -5.079 0.508 C8 MI0 41 2Y4 C29 C29 C 0 1 N N R -15.823 65.413 40.723 -5.234 0.456 0.266 C9 MI0 42 2Y4 C30 C30 C 0 1 N N N -15.569 66.897 40.569 -4.979 1.505 -0.819 C10 MI0 43 2Y4 C31 C31 C 0 1 N N N -16.389 67.852 41.475 -6.099 2.513 -0.816 C11 MI0 44 2Y4 C32 C32 C 0 1 N N N -16.287 69.117 43.550 -6.975 4.739 -1.282 C12 MI0 45 2Y4 H4 H4 H 0 1 N N N -21.403 58.406 31.061 7.352 2.680 3.006 H21 MOR 46 2Y4 H4A H4A H 0 1 N N N -20.260 59.502 30.182 6.644 3.046 1.414 H22 MOR 47 2Y4 H3 H3 H 0 1 N N N -19.877 60.495 31.961 5.594 1.011 2.250 H31 MOR 48 2Y4 H3A H3A H 0 1 N N N -21.107 59.451 32.827 7.183 0.281 2.594 H32 MOR 49 2Y4 H2 H2 H 0 1 N N N -22.115 63.059 31.239 7.865 0.263 -1.195 H51 MOR 50 2Y4 H2A H2A H 0 1 N N N -23.509 61.940 31.508 8.687 -0.214 0.313 H52 MOR 51 2Y4 H1 H1 H 0 1 N N N -21.213 61.715 29.629 7.948 2.616 -0.565 H61 MOR 52 2Y4 H1A H1A H 0 1 N N N -22.987 61.775 29.293 9.587 1.943 -0.384 H62 MOR 53 2Y4 HN2 HN2 H 0 1 N N N -20.506 60.392 34.297 4.344 0.349 1.457 H PHE 54 2Y4 H6 H6 H 0 1 N N N -21.470 62.613 35.915 3.294 -0.189 -1.214 HA PHE 55 2Y4 H8 H8 H 0 1 N N N -19.610 60.301 36.607 3.051 -2.200 1.067 HB2 PHE 56 2Y4 H8A H8A H 0 1 N N N -20.298 61.497 37.787 2.109 -2.265 -0.442 HB3 PHE 57 2Y4 H10 H10 H 0 1 N N N -20.906 58.480 35.836 3.184 -2.785 -2.558 HD1 PHE 58 2Y4 H11 H11 H 0 1 N N N -22.712 61.446 38.275 5.439 -2.639 1.059 HD2 PHE 59 2Y4 H12 H12 H 0 1 N N N -22.859 57.043 36.144 5.055 -3.929 -3.678 HE1 PHE 60 2Y4 H13 H13 H 0 1 N N N -24.681 60.015 38.620 7.310 -3.782 -0.061 HE2 PHE 61 2Y4 H14 H14 H 0 1 N N N -24.755 57.784 37.529 7.116 -4.432 -2.428 HZ PHE 62 2Y4 HN3 HN3 H 0 1 N N N -20.448 64.162 36.767 0.666 -0.626 -0.803 H NLE 63 2Y4 H15 H15 H 0 1 N N N -17.535 64.609 36.295 -0.260 0.818 1.560 HA NLE 64 2Y4 H17 H17 H 0 1 N N N -19.220 66.098 34.936 -0.623 1.914 -1.265 HB2 NLE 65 2Y4 H17A H17A H 0 0 N N N -19.606 66.853 36.510 -1.494 2.509 0.169 HB3 NLE 66 2Y4 H18 H18 H 0 1 N N N -17.107 67.152 36.882 0.667 3.071 1.248 HG2 NLE 67 2Y4 H18A H18A H 0 0 N N N -16.866 66.615 35.169 1.538 2.476 -0.186 HG3 NLE 68 2Y4 H19 H19 H 0 1 N N N -18.024 68.579 34.336 0.393 4.174 -1.585 HD2 NLE 69 2Y4 H19A H19A H 0 0 N N N -18.551 69.044 35.957 -0.478 4.768 -0.151 HD3 NLE 70 2Y4 H20 H20 H 0 1 N N N -16.394 70.230 35.355 1.683 5.331 0.928 HE1 NLE 71 2Y4 H20A H20A H 0 0 N N N -16.142 69.110 36.737 2.554 4.736 -0.506 HE2 NLE 72 2Y4 H20B H20B H 0 0 N N N -15.606 68.637 35.089 1.509 6.172 -0.632 HE3 NLE 73 2Y4 HN4 HN4 H 0 1 N N N -16.700 64.344 38.361 -2.898 1.076 1.207 H1 MI0 74 2Y4 HO5 HO5 H 0 1 N N N -13.913 65.078 40.393 -4.649 1.631 1.808 H2 MI0 75 2Y4 H21 H21 H 0 1 N N N -17.897 65.666 40.637 -3.903 -0.991 -0.615 H3 MI0 76 2Y4 H22 H22 H 0 1 N N N -16.681 62.837 40.621 -3.402 -2.158 1.558 H4 MI0 77 2Y4 H22A H22A H 0 0 N N N -17.359 63.700 42.075 -4.527 -1.044 2.371 H5 MI0 78 2Y4 H23 H23 H 0 1 N N N -18.927 62.865 39.652 -6.333 -1.804 0.791 H6 MI0 79 2Y4 H24 H24 H 0 1 N N N -19.945 63.848 42.295 -4.954 -4.009 2.388 H7 MI0 80 2Y4 H24A H24A H 0 0 N N N -19.937 64.723 40.730 -6.090 -2.806 3.046 H8 MI0 81 2Y4 H25 H25 H 0 1 N N N -17.997 60.902 40.712 -4.840 -2.560 -1.039 H9 MI0 82 2Y4 H25A H25A H 0 0 N N N -18.647 61.438 42.311 -4.224 -3.865 0.003 H10 MI0 83 2Y4 H26 H26 H 0 1 N N N -22.139 63.580 41.152 -7.241 -4.949 2.564 H11 MI0 84 2Y4 H26A H26A H 0 0 N N N -21.314 62.927 39.696 -7.858 -3.644 1.522 H12 MI0 85 2Y4 H27 H27 H 0 1 N N N -20.215 60.598 39.834 -7.128 -3.500 -0.863 H13 MI0 86 2Y4 H27A H27A H 0 0 N N N -20.146 59.776 41.432 -5.992 -4.702 -1.521 H14 MI0 87 2Y4 H28 H28 H 0 1 N N N -21.225 61.698 42.504 -5.748 -5.704 0.734 H15 MI0 88 2Y4 H28A H28A H 0 0 N N N -22.233 61.108 41.128 -7.450 -5.710 0.213 H16 MI0 89 2Y4 H29 H29 H 0 1 N N N -15.856 65.209 41.803 -6.133 -0.110 0.020 H17 MI0 90 2Y4 H32 H32 H 0 1 N N N -15.527 69.633 44.155 -7.801 4.367 -1.888 H18 MI0 91 2Y4 H32A H32A H 0 0 N N N -17.058 69.837 43.237 -7.317 4.898 -0.259 H19 MI0 92 2Y4 H51 H51 H 0 1 N N N -16.752 68.319 44.148 -6.617 5.681 -1.696 H20 MI0 93 2Y4 H48 H48 H 0 1 N N N -14.669 68.642 42.214 -5.012 4.006 -1.626 H21 MI0 94 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 2Y4 N2 C6 SING N N 1 2Y4 N2 HN2 SING N N 2 2Y4 O3 C7 DOUB N N 3 2Y4 C6 C8 SING N N 4 2Y4 C6 H6 SING N N 5 2Y4 C7 C6 SING N N 6 2Y4 C7 N3 SING N N 7 2Y4 C8 C9 SING N N 8 2Y4 C8 H8 SING N N 9 2Y4 C8 H8A SING N N 10 2Y4 C9 C11 SING Y N 11 2Y4 C10 C9 DOUB Y N 12 2Y4 C10 C12 SING Y N 13 2Y4 C10 H10 SING N N 14 2Y4 C11 C13 DOUB Y N 15 2Y4 C11 H11 SING N N 16 2Y4 C12 C14 DOUB Y N 17 2Y4 C12 H12 SING N N 18 2Y4 C13 H13 SING N N 19 2Y4 C14 C13 SING Y N 20 2Y4 C14 H14 SING N N 21 2Y4 C1 O1 SING N N 22 2Y4 C1 C2 SING N N 23 2Y4 C1 H1 SING N N 24 2Y4 C1 H1A SING N N 25 2Y4 F1 C30 SING N N 26 2Y4 N1 C5 SING N N 27 2Y4 O1 C4 SING N N 28 2Y4 C2 N1 SING N N 29 2Y4 C2 H2 SING N N 30 2Y4 C2 H2A SING N N 31 2Y4 C3 N1 SING N N 32 2Y4 C3 H3 SING N N 33 2Y4 C3 H3A SING N N 34 2Y4 N3 C15 SING N N 35 2Y4 N3 HN3 SING N N 36 2Y4 C4 C3 SING N N 37 2Y4 C4 H4 SING N N 38 2Y4 C4 H4A SING N N 39 2Y4 N4 C21 SING N N 40 2Y4 N4 HN4 SING N N 41 2Y4 C5 N2 SING N N 42 2Y4 C5 O2 DOUB N N 43 2Y4 N5 C32 SING N N 44 2Y4 O5 C29 SING N N 45 2Y4 O5 HO5 SING N N 46 2Y4 O6 C31 DOUB N N 47 2Y4 C15 C16 SING N N 48 2Y4 C15 H15 SING N N 49 2Y4 C16 N4 SING N N 50 2Y4 C16 O4 DOUB N N 51 2Y4 C17 C15 SING N N 52 2Y4 C17 H17 SING N N 53 2Y4 C17 H17A SING N N 54 2Y4 C18 C17 SING N N 55 2Y4 C18 H18 SING N N 56 2Y4 C18 H18A SING N N 57 2Y4 C19 C18 SING N N 58 2Y4 C19 C20 SING N N 59 2Y4 C19 H19 SING N N 60 2Y4 C19 H19A SING N N 61 2Y4 C20 H20 SING N N 62 2Y4 C20 H20A SING N N 63 2Y4 C20 H20B SING N N 64 2Y4 C21 C29 SING N N 65 2Y4 C21 C22 SING N N 66 2Y4 C21 H21 SING N N 67 2Y4 C22 H22 SING N N 68 2Y4 C22 H22A SING N N 69 2Y4 C23 C22 SING N N 70 2Y4 C23 C24 SING N N 71 2Y4 C23 C25 SING N N 72 2Y4 C23 H23 SING N N 73 2Y4 C24 H24 SING N N 74 2Y4 C24 H24A SING N N 75 2Y4 C25 H25 SING N N 76 2Y4 C25 H25A SING N N 77 2Y4 C26 C24 SING N N 78 2Y4 C26 C28 SING N N 79 2Y4 C26 H26 SING N N 80 2Y4 C26 H26A SING N N 81 2Y4 C27 C25 SING N N 82 2Y4 C27 C28 SING N N 83 2Y4 C27 H27 SING N N 84 2Y4 C27 H27A SING N N 85 2Y4 C28 H28 SING N N 86 2Y4 C28 H28A SING N N 87 2Y4 C29 H29 SING N N 88 2Y4 C30 F2 SING N N 89 2Y4 C30 C29 SING N N 90 2Y4 C30 C31 SING N N 91 2Y4 C31 N5 SING N N 92 2Y4 C32 H32 SING N N 93 2Y4 C32 H32A SING N N 94 2Y4 C32 H51 SING N N 95 2Y4 N5 H48 SING N N 96 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 2Y4 SMILES ACDLabs 12.01 "O=C(NC(C(=O)NC(C(=O)NC(CC1CCCCC1)C(O)C(F)(F)C(=O)NC)CCCC)Cc2ccccc2)N3CCOCC3" 2Y4 SMILES_CANONICAL CACTVS 3.370 "CCCC[C@H](NC(=O)[C@H](Cc1ccccc1)NC(=O)N2CCOCC2)C(=O)N[C@@H](CC3CCCCC3)[C@@H](O)C(F)(F)C(=O)NC" 2Y4 SMILES CACTVS 3.370 "CCCC[CH](NC(=O)[CH](Cc1ccccc1)NC(=O)N2CCOCC2)C(=O)N[CH](CC3CCCCC3)[CH](O)C(F)(F)C(=O)NC" 2Y4 SMILES_CANONICAL "OpenEye OEToolkits" 1.7.0 "CCCC[C@@H](C(=O)N[C@@H](CC1CCCCC1)[C@H](C(C(=O)NC)(F)F)O)NC(=O)[C@H](Cc2ccccc2)NC(=O)N3CCOCC3" 2Y4 SMILES "OpenEye OEToolkits" 1.7.0 "CCCCC(C(=O)NC(CC1CCCCC1)C(C(C(=O)NC)(F)F)O)NC(=O)C(Cc2ccccc2)NC(=O)N3CCOCC3" 2Y4 InChI InChI 1.03 "InChI=1S/C32H49F2N5O6/c1-3-4-15-24(28(41)37-25(20-22-11-7-5-8-12-22)27(40)32(33,34)30(43)35-2)36-29(42)26(21-23-13-9-6-10-14-23)38-31(44)39-16-18-45-19-17-39/h6,9-10,13-14,22,24-27,40H,3-5,7-8,11-12,15-21H2,1-2H3,(H,35,43)(H,36,42)(H,37,41)(H,38,44)/t24-,25-,26-,27+/m0/s1" 2Y4 InChIKey InChI 1.03 ZUBYZUAWOJPWQU-YIPNQBBMSA-N # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 2Y4 "SYSTEMATIC NAME" ACDLabs 12.01 "N-[(2S)-1-{[(2S)-1-{[(2S,3R)-1-cyclohexyl-4,4-difluoro-3-hydroxy-5-(methylamino)-5-oxopentan-2-yl]amino}-1-oxohexan-2-yl]amino}-1-oxo-3-phenylpropan-2-yl]morpholine-4-carboxamide (non-preferred name)" 2Y4 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.0 "N-[(2S)-1-[[(2S)-1-[[(2S,3R)-1-cyclohexyl-4,4-difluoro-3-hydroxy-5-(methylamino)-5-oxo-pentan-2-yl]amino]-1-oxo-hexan-2-yl]amino]-1-oxo-3-phenyl-propan-2-yl]morpholine-4-carboxamide" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 2Y4 "Create component" 2010-11-09 RCSB 2Y4 "Modify descriptor" 2011-06-04 RCSB 2Y4 "Modify synonyms" 2020-06-05 PDBE # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id 2Y4 _pdbx_chem_comp_synonyms.name "CP-81,198" _pdbx_chem_comp_synonyms.provenance ? _pdbx_chem_comp_synonyms.type ? ##