data_2YI # _chem_comp.id 2YI _chem_comp.name "methyl 3-[4-[(4-bromophenyl)methyl]piperazin-1-yl]carbonyl-5-[(2-ethyl-2-methanoyl-butanoyl)amino]benzoate" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C27 H32 Br N3 O5" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2021-06-23 _chem_comp.pdbx_modified_date 2021-07-02 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 558.464 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 2YI _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7OR4 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 2YI O18 O1 O 0 1 N N N -42.073 26.138 26.418 -5.893 -3.435 0.827 O18 2YI 1 2YI C1 C1 C 0 1 N N N -36.837 29.007 22.908 -5.744 3.245 1.376 C1 2YI 2 2YI C2 C2 C 0 1 N N N -37.963 30.014 22.566 -6.071 2.794 -0.049 C2 2YI 3 2YI C3 C3 C 0 1 N N N -38.089 30.330 21.056 -5.487 3.775 -1.032 C3 2YI 4 2YI C5 C4 C 0 1 N N N -39.296 29.519 23.043 -5.481 1.429 -0.291 C5 2YI 5 2YI C6 C5 C 0 1 N N N -36.442 28.023 21.849 -6.336 2.249 2.375 C6 2YI 6 2YI C7 C6 C 0 1 N N N -37.579 31.215 23.448 -7.589 2.733 -0.228 C7 2YI 7 2YI C8 C7 C 0 1 N N N -37.441 30.919 24.956 -8.188 4.119 0.017 C8 2YI 8 2YI C11 C8 C 0 1 Y N N -41.285 30.077 24.203 -3.613 -0.046 -0.303 C11 2YI 9 2YI C12 C9 C 0 1 Y N N -42.067 31.141 24.636 -2.324 -0.218 -0.785 C12 2YI 10 2YI C17 C10 C 0 1 N N N -43.072 27.151 26.027 -4.642 -3.605 0.359 C17 2YI 11 2YI C16 C11 C 0 1 Y N N -41.615 28.773 24.658 -4.370 -1.148 0.070 C16 2YI 12 2YI C15 C12 C 0 1 Y N N -42.707 28.540 25.510 -3.836 -2.433 -0.039 C15 2YI 13 2YI C14 C13 C 0 1 Y N N -43.478 29.634 25.907 -2.540 -2.608 -0.523 C14 2YI 14 2YI C13 C14 C 0 1 Y N N -43.155 30.929 25.478 -1.784 -1.500 -0.897 C13 2YI 15 2YI C20 C15 C 0 1 N N N -42.429 24.805 26.819 -6.627 -4.631 1.199 C20 2YI 16 2YI C21 C16 C 0 1 N N N -43.998 32.109 25.894 -0.409 -1.681 -1.410 C21 2YI 17 2YI N4 N1 N 0 1 N N N -40.234 30.407 23.378 -4.150 1.241 -0.187 N4 2YI 18 2YI O9 O2 O 0 1 N N N -38.768 29.723 20.207 -4.676 3.404 -1.846 O9 2YI 19 2YI O10 O3 O 0 1 N N N -39.419 28.313 23.177 -6.204 0.498 -0.579 O10 2YI 20 2YI O19 O4 O 0 1 N N N -44.249 26.860 26.172 -4.176 -4.723 0.264 O19 2YI 21 2YI O22 O5 O 0 1 N N N -44.822 31.960 26.780 -0.179 -2.537 -2.242 O22 2YI 22 2YI N23 N2 N 0 1 N N N -43.877 33.285 25.269 0.589 -0.897 -0.956 N23 2YI 23 2YI C24 C17 C 0 1 N N N -44.339 33.502 23.906 0.317 0.206 -0.023 C24 2YI 24 2YI C25 C18 C 0 1 N N N -45.578 34.344 24.146 1.263 0.073 1.176 C25 2YI 25 2YI N26 N3 N 0 1 N N N -45.176 35.668 24.647 2.649 -0.007 0.696 N26 2YI 26 2YI C27 C19 C 0 1 N N N -44.399 35.528 25.900 2.860 -1.207 -0.125 C27 2YI 27 2YI C28 C20 C 0 1 N N N -43.295 34.475 25.861 1.980 -1.127 -1.377 C28 2YI 28 2YI C29 C21 C 0 1 N N N -46.426 36.457 24.786 3.598 0.039 1.816 C29 2YI 29 2YI C30 C22 C 0 1 Y N N -46.344 37.743 25.563 4.997 0.202 1.283 C30 2YI 30 2YI C31 C23 C 0 1 Y N N -46.368 37.667 26.951 5.521 1.467 1.091 C31 2YI 31 2YI C32 C24 C 0 1 Y N N -46.310 38.829 27.712 6.805 1.617 0.602 C32 2YI 32 2YI C33 C25 C 0 1 Y N N -46.242 40.077 27.098 7.566 0.502 0.305 C33 2YI 33 2YI C34 C26 C 0 1 Y N N -46.221 40.171 25.699 7.043 -0.764 0.497 C34 2YI 34 2YI C35 C27 C 0 1 Y N N -46.280 38.994 24.938 5.760 -0.913 0.991 C35 2YI 35 2YI BR1 BR1 BR 0 0 N N N -46.167 41.588 28.254 9.323 0.707 -0.364 BR1 2YI 36 2YI H1 H1 H 0 1 N N N -37.165 28.432 23.786 -4.662 3.289 1.505 H1 2YI 37 2YI H2 H2 H 0 1 N N N -35.941 29.590 23.166 -6.170 4.233 1.552 H2 2YI 38 2YI H3 H3 H 0 1 N N N -37.522 31.176 20.697 -5.794 4.810 -1.010 H3 2YI 39 2YI H4 H4 H 0 1 N N N -35.638 27.377 22.230 -7.418 2.206 2.247 H4 2YI 40 2YI H5 H5 H 0 1 N N N -37.312 27.406 21.580 -5.910 1.262 2.200 H5 2YI 41 2YI H6 H6 H 0 1 N N N -36.087 28.564 20.960 -6.103 2.571 3.391 H6 2YI 42 2YI H7 H7 H 0 1 N N N -36.614 31.603 23.090 -7.822 2.411 -1.244 H7 2YI 43 2YI H8 H8 H 0 1 N N N -38.353 31.987 23.324 -8.011 2.023 0.483 H8 2YI 44 2YI H9 H9 H 0 1 N N N -37.166 31.842 25.488 -7.955 4.441 1.033 H9 2YI 45 2YI H10 H10 H 0 1 N N N -38.399 30.544 25.345 -7.766 4.829 -0.694 H10 2YI 46 2YI H11 H11 H 0 1 N N N -36.660 30.160 25.111 -9.269 4.076 -0.111 H11 2YI 47 2YI H12 H12 H 0 1 N N N -41.828 32.144 24.315 -1.738 0.642 -1.075 H12 2YI 48 2YI H13 H13 H 0 1 N N N -41.009 27.937 24.340 -5.373 -1.010 0.445 H13 2YI 49 2YI H14 H14 H 0 1 N N N -44.332 29.481 26.551 -2.124 -3.601 -0.608 H14 2YI 50 2YI H15 H15 H 0 1 N N N -41.518 24.239 27.062 -6.726 -5.282 0.330 H15 2YI 51 2YI H16 H16 H 0 1 N N N -43.079 24.850 27.705 -6.089 -5.157 1.987 H16 2YI 52 2YI H17 H17 H 0 1 N N N -42.963 24.305 25.997 -7.618 -4.353 1.559 H17 2YI 53 2YI H18 H18 H 0 1 N N N -40.172 31.338 23.020 -3.564 1.999 -0.032 H18 2YI 54 2YI H19 H19 H 0 1 N N N -44.587 32.553 23.408 0.490 1.159 -0.522 H19 2YI 55 2YI H20 H20 H 0 1 N N N -43.592 34.045 23.309 -0.717 0.150 0.319 H20 2YI 56 2YI H21 H21 H 0 1 N N N -46.132 34.461 23.203 1.152 0.943 1.824 H21 2YI 57 2YI H22 H22 H 0 1 N N N -46.220 33.849 24.889 1.018 -0.830 1.734 H22 2YI 58 2YI H24 H24 H 0 1 N N N -43.935 36.500 26.124 3.908 -1.266 -0.420 H24 2YI 59 2YI H25 H25 H 0 1 N N N -45.098 35.260 26.706 2.594 -2.093 0.451 H25 2YI 60 2YI H26 H26 H 0 1 N N N -42.942 34.258 26.880 2.046 -2.065 -1.926 H26 2YI 61 2YI H27 H27 H 0 1 N N N -42.453 34.830 25.249 2.311 -0.304 -2.010 H27 2YI 62 2YI H28 H28 H 0 1 N N N -46.776 36.704 23.773 3.355 0.881 2.464 H28 2YI 63 2YI H29 H29 H 0 1 N N N -47.168 35.816 25.284 3.532 -0.888 2.386 H29 2YI 64 2YI H30 H30 H 0 1 N N N -46.432 36.705 27.438 4.926 2.338 1.322 H30 2YI 65 2YI H31 H31 H 0 1 N N N -46.318 38.763 28.790 7.213 2.606 0.452 H31 2YI 66 2YI H32 H32 H 0 1 N N N -46.160 41.135 25.215 7.637 -1.635 0.265 H32 2YI 67 2YI H33 H33 H 0 1 N N N -46.276 39.054 23.860 5.353 -1.901 1.145 H33 2YI 68 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 2YI O9 C3 DOUB N N 1 2YI C3 C2 SING N N 2 2YI C6 C1 SING N N 3 2YI C2 C1 SING N N 4 2YI C2 C5 SING N N 5 2YI C2 C7 SING N N 6 2YI C5 O10 DOUB N N 7 2YI C5 N4 SING N N 8 2YI N4 C11 SING N N 9 2YI C7 C8 SING N N 10 2YI C24 C25 SING N N 11 2YI C24 N23 SING N N 12 2YI C25 N26 SING N N 13 2YI C11 C12 DOUB Y N 14 2YI C11 C16 SING Y N 15 2YI C12 C13 SING Y N 16 2YI N26 C29 SING N N 17 2YI N26 C27 SING N N 18 2YI C16 C15 DOUB Y N 19 2YI C29 C30 SING N N 20 2YI C35 C30 DOUB Y N 21 2YI C35 C34 SING Y N 22 2YI N23 C28 SING N N 23 2YI N23 C21 SING N N 24 2YI C13 C21 SING N N 25 2YI C13 C14 DOUB Y N 26 2YI C15 C14 SING Y N 27 2YI C15 C17 SING N N 28 2YI C30 C31 SING Y N 29 2YI C34 C33 DOUB Y N 30 2YI C28 C27 SING N N 31 2YI C21 O22 DOUB N N 32 2YI C17 O19 DOUB N N 33 2YI C17 O18 SING N N 34 2YI O18 C20 SING N N 35 2YI C31 C32 DOUB Y N 36 2YI C33 C32 SING Y N 37 2YI C33 BR1 SING N N 38 2YI C1 H1 SING N N 39 2YI C1 H2 SING N N 40 2YI C3 H3 SING N N 41 2YI C6 H4 SING N N 42 2YI C6 H5 SING N N 43 2YI C6 H6 SING N N 44 2YI C7 H7 SING N N 45 2YI C7 H8 SING N N 46 2YI C8 H9 SING N N 47 2YI C8 H10 SING N N 48 2YI C8 H11 SING N N 49 2YI C12 H12 SING N N 50 2YI C16 H13 SING N N 51 2YI C14 H14 SING N N 52 2YI C20 H15 SING N N 53 2YI C20 H16 SING N N 54 2YI C20 H17 SING N N 55 2YI N4 H18 SING N N 56 2YI C24 H19 SING N N 57 2YI C24 H20 SING N N 58 2YI C25 H21 SING N N 59 2YI C25 H22 SING N N 60 2YI C27 H24 SING N N 61 2YI C27 H25 SING N N 62 2YI C28 H26 SING N N 63 2YI C28 H27 SING N N 64 2YI C29 H28 SING N N 65 2YI C29 H29 SING N N 66 2YI C31 H30 SING N N 67 2YI C32 H31 SING N N 68 2YI C34 H32 SING N N 69 2YI C35 H33 SING N N 70 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 2YI InChI InChI 1.03 "InChI=1S/C27H32BrN3O5/c1-4-27(5-2,18-32)26(35)29-23-15-20(14-21(16-23)25(34)36-3)24(33)31-12-10-30(11-13-31)17-19-6-8-22(28)9-7-19/h6-9,14-16,18H,4-5,10-13,17H2,1-3H3,(H,29,35)" 2YI InChIKey InChI 1.03 DFOATAYHEDCOCM-UHFFFAOYSA-N 2YI SMILES_CANONICAL CACTVS 3.385 "CCC(CC)(C=O)C(=O)Nc1cc(cc(c1)C(=O)N2CCN(CC2)Cc3ccc(Br)cc3)C(=O)OC" 2YI SMILES CACTVS 3.385 "CCC(CC)(C=O)C(=O)Nc1cc(cc(c1)C(=O)N2CCN(CC2)Cc3ccc(Br)cc3)C(=O)OC" 2YI SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CCC(CC)(C=O)C(=O)Nc1cc(cc(c1)C(=O)OC)C(=O)N2CCN(CC2)Cc3ccc(cc3)Br" 2YI SMILES "OpenEye OEToolkits" 2.0.7 "CCC(CC)(C=O)C(=O)Nc1cc(cc(c1)C(=O)OC)C(=O)N2CCN(CC2)Cc3ccc(cc3)Br" # _pdbx_chem_comp_identifier.comp_id 2YI _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "methyl 3-[4-[(4-bromophenyl)methyl]piperazin-1-yl]carbonyl-5-[(2-ethyl-2-methanoyl-butanoyl)amino]benzoate" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 2YI "Create component" 2021-06-23 PDBE 2YI "Initial release" 2021-07-07 RCSB ##