data_32N
#
_chem_comp.id 32N
_chem_comp.name "(1S)-4-[(1E,3Z,5E,7E,9E,11E,13E,15E,17E)-3-(hydroxymethyl)-7,12,16-trimethyl-18-[(1R,4S)-2,6,6-trimethyl-4-oxidanyl-cyclohex-2-en-1-yl]octadeca-1,3,5,7,9,11,13,15,17-nonaenyl]-3,5,5-trimethyl-cyclohex-3-en-1-ol"
_chem_comp.type non-polymer
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C40 H56 O3"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2021-07-09
_chem_comp.pdbx_modified_date 2023-01-13
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 584.871
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code 32N
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 7F78
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site PDBJ
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
32N C7 C1 C 0 1 N N N 213.792 121.967 147.337 -12.909 1.586 -0.572 C7 32N 1
32N C8 C2 C 0 1 N N N 215.688 122.598 145.850 -11.517 0.622 -2.407 C8 32N 2
32N C9 C3 C 0 1 N N N 213.915 124.724 145.458 -9.967 0.579 -0.008 C9 32N 3
32N O1 O1 O 0 1 N N N 195.227 123.729 128.272 14.329 -2.450 -0.632 O1 32N 4
32N C1 C4 C 0 1 N N N 213.978 125.241 147.860 -11.382 -1.133 0.764 C1 32N 5
32N C5 C5 C 0 1 N N S 215.050 123.674 149.499 -13.767 -1.241 0.077 C5 32N 6
32N C6 C6 C 0 1 N N N 214.707 125.115 149.175 -12.630 -1.966 0.799 C6 32N 7
32N C4 C7 C 0 1 N N N 215.745 123.025 148.315 -13.258 -0.779 -1.294 C4 32N 8
32N C3 C8 C 0 1 N N N 214.871 123.019 147.072 -12.215 0.320 -1.079 C3 32N 9
32N C2 C9 C 0 1 N N N 214.235 124.389 146.855 -11.197 -0.124 -0.071 C2 32N 10
32N C C10 C 0 1 N N N 212.976 126.355 147.801 -10.280 -1.461 1.738 C 32N 11
32N O O2 O 0 1 N N N 215.902 123.614 150.643 -14.871 -2.132 -0.097 O 32N 12
32N C10 C11 C 0 1 N N N 212.829 124.382 144.764 -8.794 -0.088 -0.172 C10 32N 13
32N C11 C12 C 0 1 N N N 212.517 124.713 143.389 -7.572 0.584 0.005 C11 32N 14
32N C12 C13 C 0 1 N N N 211.367 124.246 142.846 -6.395 -0.086 -0.159 C12 32N 15
32N C13 C14 C 0 1 N N N 210.882 124.421 141.504 -5.180 0.548 0.138 C13 32N 16
32N C14 C15 C 0 1 N N N 209.713 123.905 141.107 -3.988 -0.087 -0.131 C14 32N 17
32N C15 C16 C 0 1 N N N 209.084 123.993 139.801 -2.776 0.546 0.166 C15 32N 18
32N C16 C17 C 0 1 N N N 207.828 123.503 139.653 -1.583 -0.089 -0.103 C16 32N 19
32N C17 C18 C 0 1 N N N 206.984 123.561 138.500 -0.370 0.544 0.194 C17 32N 20
32N C18 C19 C 0 1 N N N 205.739 123.027 138.492 0.822 -0.092 -0.076 C18 32N 21
32N C19 C20 C 0 1 N N N 204.838 123.062 137.381 2.035 0.541 0.221 C19 32N 22
32N C20 C21 C 0 1 N N N 203.589 122.541 137.318 3.227 -0.093 -0.048 C20 32N 23
32N C21 C22 C 0 1 N N N 202.966 121.790 138.459 3.226 -1.469 -0.663 C21 32N 24
32N C22 C23 C 0 1 N N N 202.796 122.718 136.114 4.442 0.540 0.250 C22 32N 25
32N C23 C24 C 0 1 N N N 201.612 122.153 135.851 5.623 -0.089 -0.017 C23 32N 26
32N C24 C25 C 0 1 N N N 200.847 122.354 134.655 6.841 0.547 0.281 C24 32N 27
32N C25 C26 C 0 1 N N N 199.660 121.786 134.338 8.017 -0.080 0.015 C25 32N 28
32N C26 C27 C 0 1 N N N 198.980 120.791 135.231 8.016 -1.456 -0.599 C26 32N 29
32N C27 C28 C 0 1 N N N 198.995 122.141 133.098 9.246 0.561 0.316 C27 32N 30
32N C28 C29 C 0 1 N N N 197.868 121.556 132.725 10.403 -0.055 0.055 C28 32N 31
32N C29 C30 C 0 1 N N R 197.060 121.812 131.480 11.708 0.627 0.375 C29 32N 32
32N C30 C31 C 0 1 N N N 195.903 122.657 131.661 12.479 -0.210 1.353 C30 32N 33
32N C31 C32 C 0 1 N N N 195.206 123.062 130.612 13.488 -0.955 1.033 C31 32N 34
32N C32 C33 C 0 1 N N S 195.515 122.676 129.200 14.034 -1.078 -0.359 C32 32N 35
32N C33 C34 C 0 1 N N N 196.945 122.164 128.997 13.009 -0.568 -1.375 C33 32N 36
32N C34 C35 C 0 1 N N N 197.875 122.204 130.229 12.514 0.809 -0.913 C34 32N 37
32N C35 C36 C 0 1 N N N 199.022 121.225 129.996 13.711 1.724 -0.651 C35 32N 38
32N C36 C37 C 0 1 N N N 198.455 123.609 130.367 11.623 1.423 -1.995 C36 32N 39
32N C37 C38 C 0 1 N N N 195.574 123.042 133.071 12.052 -0.181 2.798 C37 32N 40
32N C38 C39 C 0 1 N N N 209.844 124.663 138.694 -2.774 1.922 0.781 C38 32N 41
32N C39 C40 C 0 1 N N N 213.479 125.551 142.592 -7.563 2.044 0.377 C39 32N 42
32N O2 O3 O 0 1 N N N 214.701 124.878 142.392 -8.143 2.210 1.672 O2 32N 43
32N H1 H1 H 0 1 N N N 213.199 122.262 148.215 -13.646 1.915 -1.305 H1 32N 44
32N H2 H2 H 0 1 N N N 213.133 121.889 146.460 -13.408 1.373 0.373 H2 32N 45
32N H3 H3 H 0 1 N N N 214.268 120.994 147.526 -12.169 2.372 -0.424 H3 32N 46
32N H4 H4 H 0 1 N N N 216.135 121.609 146.030 -10.842 1.468 -2.278 H4 32N 47
32N H5 H5 H 0 1 N N N 215.031 122.548 144.969 -10.948 -0.252 -2.725 H5 32N 48
32N H6 H6 H 0 1 N N N 216.485 123.334 145.671 -12.263 0.865 -3.163 H6 32N 49
32N H7 H7 H 0 1 N N N 214.648 125.318 144.932 -9.962 1.644 0.170 H7 32N 50
32N H8 H8 H 0 1 N N N 194.339 124.037 128.408 14.982 -2.839 -0.034 H8 32N 51
32N H10 H10 H 0 1 N N N 214.117 123.128 149.700 -14.083 -0.378 0.663 H10 32N 52
32N H11 H11 H 0 1 N N N 215.638 125.698 149.122 -12.441 -2.921 0.309 H11 32N 53
32N H12 H12 H 0 1 N N N 214.068 125.516 149.975 -12.916 -2.144 1.836 H12 32N 54
32N H13 H13 H 0 1 N N N 215.996 121.987 148.577 -12.802 -1.619 -1.817 H13 32N 55
32N H14 H14 H 0 1 N N N 216.668 123.582 148.097 -14.090 -0.389 -1.881 H14 32N 56
32N H16 H16 H 0 1 N N N 212.970 126.894 148.760 -10.617 -2.245 2.417 H16 32N 57
32N H17 H17 H 0 1 N N N 213.247 127.049 146.992 -9.403 -1.807 1.191 H17 32N 58
32N H18 H18 H 0 1 N N N 211.976 125.939 147.608 -10.024 -0.570 2.311 H18 32N 59
32N H19 H19 H 0 1 N N N 215.467 124.020 151.384 -15.237 -2.471 0.732 H19 32N 60
32N H20 H20 H 0 1 N N N 212.096 123.788 145.289 -8.801 -1.135 -0.438 H20 32N 61
32N H21 H21 H 0 1 N N N 210.735 123.669 143.505 -6.398 -1.105 -0.519 H21 32N 62
32N H22 H22 H 0 1 N N N 211.476 124.983 140.799 -5.180 1.534 0.579 H22 32N 63
32N H23 H23 H 0 1 N N N 209.166 123.351 141.855 -3.989 -1.073 -0.572 H23 32N 64
32N H24 H24 H 0 1 N N N 207.412 123.005 140.516 -1.584 -1.075 -0.544 H24 32N 65
32N H25 H25 H 0 1 N N N 207.351 124.046 137.607 -0.370 1.530 0.634 H25 32N 66
32N H26 H26 H 0 1 N N N 205.401 122.537 139.393 0.822 -1.078 -0.516 H26 32N 67
32N H27 H27 H 0 1 N N N 205.194 123.560 136.492 2.036 1.528 0.662 H27 32N 68
32N H28 H28 H 0 1 N N N 203.678 121.736 139.295 3.237 -1.382 -1.749 H28 32N 69
32N H29 H29 H 0 1 N N N 202.055 122.312 138.787 4.110 -2.015 -0.333 H29 32N 70
32N H30 H30 H 0 1 N N N 202.708 120.772 138.131 2.330 -2.006 -0.350 H30 32N 71
32N H31 H31 H 0 1 N N N 203.203 123.371 135.356 4.442 1.526 0.690 H31 32N 72
32N H32 H32 H 0 1 N N N 201.199 121.493 136.599 5.622 -1.075 -0.458 H32 32N 73
32N H33 H33 H 0 1 N N N 201.264 123.034 133.927 6.842 1.533 0.721 H33 32N 74
32N H34 H34 H 0 1 N N N 199.595 120.621 136.127 8.027 -1.368 -1.686 H34 32N 75
32N H35 H35 H 0 1 N N N 197.996 121.180 135.531 8.901 -2.001 -0.270 H35 32N 76
32N H36 H36 H 0 1 N N N 198.850 119.842 134.690 7.121 -1.992 -0.287 H36 32N 77
32N H37 H37 H 0 1 N N N 199.430 122.900 132.465 9.246 1.547 0.757 H37 32N 78
32N H38 H38 H 0 1 N N N 197.480 120.803 133.395 10.402 -1.041 -0.386 H38 32N 79
32N H39 H39 H 0 1 N N N 196.647 120.826 131.223 11.508 1.604 0.814 H39 32N 80
32N H40 H40 H 0 1 N N N 194.361 123.712 130.786 13.967 -1.523 1.817 H40 32N 81
32N H41 H41 H 0 1 N N N 194.852 121.834 128.954 14.947 -0.489 -0.443 H41 32N 82
32N H42 H42 H 0 1 N N N 196.881 121.118 128.661 13.477 -0.480 -2.355 H42 32N 83
32N H43 H43 H 0 1 N N N 197.409 122.774 128.208 12.170 -1.261 -1.427 H43 32N 84
32N H44 H44 H 0 1 N N N 199.698 121.238 130.864 14.291 1.837 -1.568 H44 32N 85
32N H45 H45 H 0 1 N N N 198.617 120.211 129.862 13.356 2.702 -0.324 H45 32N 86
32N H46 H46 H 0 1 N N N 199.578 121.520 129.094 14.340 1.288 0.125 H46 32N 87
32N H47 H47 H 0 1 N N N 199.120 123.648 131.243 10.768 0.772 -2.174 H47 32N 88
32N H48 H48 H 0 1 N N N 199.027 123.860 129.462 11.273 2.401 -1.664 H48 32N 89
32N H49 H49 H 0 1 N N N 197.636 124.332 130.496 12.195 1.534 -2.916 H49 32N 90
32N H50 H50 H 0 1 N N N 196.299 122.579 133.757 11.313 -0.962 2.974 H50 32N 91
32N H51 H51 H 0 1 N N N 195.620 124.136 133.172 12.919 -0.351 3.436 H51 32N 92
32N H52 H52 H 0 1 N N N 194.561 122.693 133.319 11.616 0.791 3.029 H52 32N 93
32N H53 H53 H 0 1 N N N 210.834 124.971 139.062 -2.785 1.835 1.867 H53 32N 94
32N H54 H54 H 0 1 N N N 209.966 123.961 137.856 -1.879 2.459 0.468 H54 32N 95
32N H55 H55 H 0 1 N N N 209.289 125.549 138.352 -3.658 2.468 0.451 H55 32N 96
32N H56 H56 H 0 1 N N N 213.671 126.489 143.134 -6.536 2.409 0.389 H56 32N 97
32N H57 H57 H 0 1 N N N 213.031 125.778 141.613 -8.141 2.609 -0.355 H57 32N 98
32N H58 H58 H 0 1 N N N 215.288 125.429 141.887 -8.170 3.127 1.977 H58 32N 99
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
32N O1 C32 SING N N 1
32N C33 C32 SING N N 2
32N C33 C34 SING N N 3
32N C32 C31 SING N N 4
32N C35 C34 SING N N 5
32N C34 C36 SING N N 6
32N C34 C29 SING N N 7
32N C31 C30 DOUB N N 8
32N C29 C30 SING N N 9
32N C29 C28 SING N N 10
32N C30 C37 SING N N 11
32N C28 C27 DOUB N E 12
32N C27 C25 SING N N 13
32N C25 C24 DOUB N E 14
32N C25 C26 SING N N 15
32N C24 C23 SING N N 16
32N C23 C22 DOUB N E 17
32N C22 C20 SING N N 18
32N C20 C19 DOUB N E 19
32N C20 C21 SING N N 20
32N C19 C18 SING N N 21
32N C18 C17 DOUB N E 22
32N C17 C16 SING N N 23
32N C38 C15 SING N N 24
32N C16 C15 DOUB N E 25
32N C15 C14 SING N N 26
32N C14 C13 DOUB N E 27
32N C13 C12 SING N N 28
32N O2 C39 SING N N 29
32N C39 C11 SING N N 30
32N C12 C11 DOUB N Z 31
32N C11 C10 SING N N 32
32N C10 C9 DOUB N E 33
32N C9 C2 SING N N 34
32N C8 C3 SING N N 35
32N C2 C3 SING N N 36
32N C2 C1 DOUB N N 37
32N C3 C7 SING N N 38
32N C3 C4 SING N N 39
32N C C1 SING N N 40
32N C1 C6 SING N N 41
32N C4 C5 SING N N 42
32N C6 C5 SING N N 43
32N C5 O SING N N 44
32N C7 H1 SING N N 45
32N C7 H2 SING N N 46
32N C7 H3 SING N N 47
32N C8 H4 SING N N 48
32N C8 H5 SING N N 49
32N C8 H6 SING N N 50
32N C9 H7 SING N N 51
32N O1 H8 SING N N 52
32N C5 H10 SING N N 53
32N C6 H11 SING N N 54
32N C6 H12 SING N N 55
32N C4 H13 SING N N 56
32N C4 H14 SING N N 57
32N C H16 SING N N 58
32N C H17 SING N N 59
32N C H18 SING N N 60
32N O H19 SING N N 61
32N C10 H20 SING N N 62
32N C12 H21 SING N N 63
32N C13 H22 SING N N 64
32N C14 H23 SING N N 65
32N C16 H24 SING N N 66
32N C17 H25 SING N N 67
32N C18 H26 SING N N 68
32N C19 H27 SING N N 69
32N C21 H28 SING N N 70
32N C21 H29 SING N N 71
32N C21 H30 SING N N 72
32N C22 H31 SING N N 73
32N C23 H32 SING N N 74
32N C24 H33 SING N N 75
32N C26 H34 SING N N 76
32N C26 H35 SING N N 77
32N C26 H36 SING N N 78
32N C27 H37 SING N N 79
32N C28 H38 SING N N 80
32N C29 H39 SING N N 81
32N C31 H40 SING N N 82
32N C32 H41 SING N N 83
32N C33 H42 SING N N 84
32N C33 H43 SING N N 85
32N C35 H44 SING N N 86
32N C35 H45 SING N N 87
32N C35 H46 SING N N 88
32N C36 H47 SING N N 89
32N C36 H48 SING N N 90
32N C36 H49 SING N N 91
32N C37 H50 SING N N 92
32N C37 H51 SING N N 93
32N C37 H52 SING N N 94
32N C38 H53 SING N N 95
32N C38 H54 SING N N 96
32N C38 H55 SING N N 97
32N C39 H56 SING N N 98
32N C39 H57 SING N N 99
32N O2 H58 SING N N 100
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
32N InChI InChI 1.03 "InChI=1S/C40H56O3/c1-29(16-12-17-31(3)20-22-37-32(4)24-35(42)26-39(37,6)7)14-10-11-15-30(2)18-13-19-34(28-41)21-23-38-33(5)25-36(43)27-40(38,8)9/h10-24,35-37,41-43H,25-28H2,1-9H3/b11-10+,16-12+,18-13+,22-20+,23-21+,29-14+,30-15+,31-17+,34-19-/t35-,36+,37+/m1/s1"
32N InChIKey InChI 1.03 ODGGKCNQKSEQNL-VVAGNOCPSA-N
32N SMILES_CANONICAL CACTVS 3.385 "CC(=C\C=C\C=C(C)\C=C\C=C(CO)\C=C\C1=C(C)C[C@H](O)CC1(C)C)/C=C/C=C(C)/C=C/[C@H]2C(=C[C@@H](O)CC2(C)C)C"
32N SMILES CACTVS 3.385 "CC(=CC=CC=C(C)C=CC=C(CO)C=CC1=C(C)C[CH](O)CC1(C)C)C=CC=C(C)C=C[CH]2C(=C[CH](O)CC2(C)C)C"
32N SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC1=C(C(C[C@H](C1)O)(C)C)/C=C/C(=C/C=C/C(=C/C=C/C=C(\C)/C=C/C=C(\C)/C=C/[C@H]2C(=C[C@H](CC2(C)C)O)C)/C)/CO"
32N SMILES "OpenEye OEToolkits" 2.0.7 "CC1=C(C(CC(C1)O)(C)C)C=CC(=CC=CC(=CC=CC=C(C)C=CC=C(C)C=CC2C(=CC(CC2(C)C)O)C)C)CO"
#
_pdbx_chem_comp_identifier.comp_id 32N
_pdbx_chem_comp_identifier.type "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version 2.0.7
_pdbx_chem_comp_identifier.identifier "(1~{S})-4-[(1~{E},3~{Z},5~{E},7~{E},9~{E},11~{E},13~{E},15~{E},17~{E})-3-(hydroxymethyl)-7,12,16-trimethyl-18-[(1~{R},4~{S})-2,6,6-trimethyl-4-oxidanyl-cyclohex-2-en-1-yl]octadeca-1,3,5,7,9,11,13,15,17-nonaenyl]-3,5,5-trimethyl-cyclohex-3-en-1-ol"
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
32N "Create component" 2021-07-09 PDBJ
32N "Modify name" 2021-07-10 PDBJ
32N "Initial release" 2023-01-18 RCSB
#