data_379 # _chem_comp.id 379 _chem_comp.name "3-{[(R)-1-amino-3-(pyridin-3-yl)propyl](hydroxy)phosphoryl}-(S)-2-benzylpropanoic acid" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C18 H23 N2 O4 P" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2014-06-27 _chem_comp.pdbx_modified_date 2014-09-19 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 362.360 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 379 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 4QIR _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 379 P11 P11 P 0 1 N N N 9.264 44.326 15.085 -0.472 0.840 -0.094 P11 379 1 379 C1 C1 C 0 1 N N N 11.693 43.778 16.294 -3.161 1.380 -0.061 C1 379 2 379 C3 C3 C 0 1 N N R 11.067 44.530 15.131 -1.822 1.968 0.387 C3 379 3 379 C6 C6 C 0 1 N N N 13.201 43.687 16.236 -3.371 0.020 0.608 C6 379 4 379 C8 C8 C 0 1 Y N N 13.749 42.935 17.454 -4.690 -0.559 0.167 C8 379 5 379 N10 N10 N 0 1 N N N 11.370 45.964 15.198 -1.621 3.274 -0.256 N10 379 6 379 C11 C11 C 0 1 N N N 8.753 42.592 14.888 1.124 1.541 0.440 C11 379 7 379 O12 O12 O 0 1 N N N 8.702 45.107 13.929 -0.470 0.657 -1.693 O12 379 8 379 C13 C13 C 0 1 N N S 8.358 41.869 16.167 2.243 0.539 0.149 C13 379 9 379 O13 O13 O 0 1 N N N 8.704 44.728 16.358 -0.675 -0.475 0.554 O13 379 10 379 C15 C15 C 0 1 N N N 9.461 40.964 16.646 2.191 -0.578 1.159 C15 379 11 379 C16 C16 C 0 1 N N N 7.256 40.892 15.875 3.597 1.247 0.241 C16 379 12 379 C01 C01 C 0 1 Y N N 15.027 43.206 17.903 -4.761 -1.362 -0.956 C01 379 13 379 C17 C17 C 0 1 Y N N 5.877 41.440 16.181 4.690 0.292 -0.165 C17 379 14 379 N18 N18 N 0 1 Y N N 15.534 42.546 18.980 -5.913 -1.873 -1.348 N18 379 15 379 C19 C19 C 0 1 Y N N 14.781 41.603 19.632 -7.033 -1.641 -0.692 C19 379 16 379 C20 C20 C 0 1 Y N N 13.494 41.289 19.181 -7.039 -0.847 0.439 C20 379 17 379 C21 C21 C 0 1 Y N N 12.997 41.968 18.108 -5.847 -0.297 0.885 C21 379 18 379 O23 O23 O 0 1 N N N 9.703 40.778 17.868 1.346 -0.574 2.022 O23 379 19 379 O24 O24 O 0 1 N N N 10.156 40.403 15.795 3.085 -1.579 1.099 O24 379 20 379 C36 C36 C 0 1 Y N N 5.051 41.785 15.120 5.082 0.212 -1.488 C36 379 21 379 C37 C37 C 0 1 Y N N 3.774 42.266 15.352 6.085 -0.663 -1.860 C37 379 22 379 C38 C38 C 0 1 Y N N 3.311 42.407 16.656 6.697 -1.458 -0.909 C38 379 23 379 C39 C39 C 0 1 Y N N 4.127 42.062 17.725 6.306 -1.377 0.414 C39 379 24 379 C40 C40 C 0 1 Y N N 5.412 41.575 17.489 5.306 -0.498 0.787 C40 379 25 379 H1 H1 H 0 1 N N N 11.414 44.291 17.226 -3.968 2.054 0.226 H1 379 26 379 H2 H2 H 0 1 N N N 11.286 42.756 16.302 -3.160 1.256 -1.144 H2 379 27 379 H12 H12 H 0 1 N N N 11.443 44.112 14.186 -1.824 2.092 1.469 H12 379 28 379 H6 H6 H 0 1 N N N 13.495 43.153 15.320 -2.564 -0.654 0.321 H6 379 29 379 H7 H7 H 0 1 N N N 13.623 44.703 16.220 -3.372 0.145 1.691 H7 379 30 379 H11 H11 H 0 1 N N N 12.361 46.095 15.224 -1.615 3.185 -1.261 H11 379 31 379 H13 H13 H 0 1 N N N 10.994 46.422 14.392 -2.320 3.936 0.045 H13 379 32 379 H16 H16 H 0 1 N N N 7.889 42.570 14.207 1.314 2.467 -0.103 H16 379 33 379 H17 H17 H 0 1 N N N 9.591 42.043 14.435 1.090 1.748 1.510 H17 379 34 379 H4 H4 H 0 1 N N N 8.067 45.737 14.250 -0.342 1.480 -2.183 H4 379 35 379 H18 H18 H 0 1 N N N 8.061 42.584 16.949 2.114 0.130 -0.853 H18 379 36 379 H19 H19 H 0 1 N N N 7.298 40.626 14.808 3.602 2.109 -0.426 H19 379 37 379 H20 H20 H 0 1 N N N 7.417 39.991 16.484 3.765 1.578 1.265 H20 379 38 379 H8 H8 H 0 1 N N N 15.628 43.947 17.396 -3.864 -1.574 -1.518 H8 379 39 379 H10 H10 H 0 1 N N N 15.184 41.100 20.499 -7.957 -2.076 -1.044 H10 379 40 379 H14 H14 H 0 1 N N N 12.908 40.526 19.672 -7.960 -0.661 0.971 H14 379 41 379 H15 H15 H 0 1 N N N 11.998 41.749 17.760 -5.821 0.324 1.768 H15 379 42 379 H9 H9 H 0 1 N N N 10.819 39.875 16.225 3.012 -2.273 1.768 H9 379 43 379 H21 H21 H 0 1 N N N 5.407 41.677 14.106 4.604 0.833 -2.232 H21 379 44 379 H22 H22 H 0 1 N N N 3.137 42.532 14.521 6.390 -0.727 -2.894 H22 379 45 379 H25 H25 H 0 1 N N N 2.316 42.785 16.837 7.480 -2.142 -1.200 H25 379 46 379 H23 H23 H 0 1 N N N 3.767 42.171 18.737 6.784 -1.998 1.158 H23 379 47 379 H24 H24 H 0 1 N N N 6.047 41.302 18.319 5.003 -0.432 1.822 H24 379 48 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 379 P11 C3 SING N N 1 379 P11 C11 SING N N 2 379 P11 O12 SING N N 3 379 P11 O13 DOUB N N 4 379 C1 C3 SING N N 5 379 C1 C6 SING N N 6 379 C3 N10 SING N N 7 379 C6 C8 SING N N 8 379 C8 C01 DOUB Y N 9 379 C8 C21 SING Y N 10 379 C11 C13 SING N N 11 379 C13 C15 SING N N 12 379 C13 C16 SING N N 13 379 C15 O23 DOUB N N 14 379 C15 O24 SING N N 15 379 C16 C17 SING N N 16 379 C01 N18 SING Y N 17 379 C17 C36 DOUB Y N 18 379 C17 C40 SING Y N 19 379 N18 C19 DOUB Y N 20 379 C19 C20 SING Y N 21 379 C20 C21 DOUB Y N 22 379 C36 C37 SING Y N 23 379 C37 C38 DOUB Y N 24 379 C38 C39 SING Y N 25 379 C39 C40 DOUB Y N 26 379 C1 H1 SING N N 27 379 C1 H2 SING N N 28 379 C3 H12 SING N N 29 379 C6 H6 SING N N 30 379 C6 H7 SING N N 31 379 N10 H11 SING N N 32 379 N10 H13 SING N N 33 379 C11 H16 SING N N 34 379 C11 H17 SING N N 35 379 O12 H4 SING N N 36 379 C13 H18 SING N N 37 379 C16 H19 SING N N 38 379 C16 H20 SING N N 39 379 C01 H8 SING N N 40 379 C19 H10 SING N N 41 379 C20 H14 SING N N 42 379 C21 H15 SING N N 43 379 O24 H9 SING N N 44 379 C36 H21 SING N N 45 379 C37 H22 SING N N 46 379 C38 H25 SING N N 47 379 C39 H23 SING N N 48 379 C40 H24 SING N N 49 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 379 SMILES ACDLabs 12.01 "O=C(O)C(Cc1ccccc1)CP(=O)(O)C(N)CCc2cccnc2" 379 InChI InChI 1.03 "InChI=1S/C18H23N2O4P/c19-17(9-8-15-7-4-10-20-12-15)25(23,24)13-16(18(21)22)11-14-5-2-1-3-6-14/h1-7,10,12,16-17H,8-9,11,13,19H2,(H,21,22)(H,23,24)/t16-,17-/m1/s1" 379 InChIKey InChI 1.03 LWRKOPLMYMXZKW-IAGOWNOFSA-N 379 SMILES_CANONICAL CACTVS 3.385 "N[C@@H](CCc1cccnc1)[P](O)(=O)C[C@@H](Cc2ccccc2)C(O)=O" 379 SMILES CACTVS 3.385 "N[CH](CCc1cccnc1)[P](O)(=O)C[CH](Cc2ccccc2)C(O)=O" 379 SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "c1ccc(cc1)C[C@H](CP(=O)([C@H](CCc2cccnc2)N)O)C(=O)O" 379 SMILES "OpenEye OEToolkits" 1.7.6 "c1ccc(cc1)CC(CP(=O)(C(CCc2cccnc2)N)O)C(=O)O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 379 "SYSTEMATIC NAME" ACDLabs 12.01 "(2S)-3-[(S)-[(1R)-1-amino-3-(pyridin-3-yl)propyl](hydroxy)phosphoryl]-2-benzylpropanoic acid" 379 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "(2S)-2-[[[(1R)-1-azanyl-3-pyridin-3-yl-propyl]-oxidanyl-phosphoryl]methyl]-3-phenyl-propanoic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 379 "Create component" 2014-06-27 RCSB 379 "Modify name" 2014-06-27 RCSB 379 "Initial release" 2014-09-24 RCSB #