data_3A4 # _chem_comp.id 3A4 _chem_comp.name "(2S)-2-({[(3S,4aS,8aR)-2-(biphenyl-4-ylcarbonyl)decahydroisoquinolin-3-yl]methyl}amino)-3-(1H-imidazol-5-yl)propanal" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C29 H34 N4 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2014-07-15 _chem_comp.pdbx_modified_date 2015-02-06 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 470.606 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 3A4 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 4TWX _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 3A4 O1 O1 O 0 1 N N N -20.972 -44.929 1.372 -3.866 0.109 -3.081 O1 3A4 1 3A4 C24 C1 C 0 1 N N N -20.666 -43.753 1.278 -4.366 -0.946 -2.773 C24 3A4 2 3A4 C23 C2 C 0 1 N N S -21.503 -42.599 1.789 -4.396 -1.373 -1.328 C23 3A4 3 3A4 C25 C3 C 0 1 N N N -20.599 -41.656 2.546 -5.847 -1.562 -0.882 C25 3A4 4 3A4 C26 C4 C 0 1 Y N N -19.862 -40.662 1.715 -5.875 -2.046 0.545 C26 3A4 5 3A4 N3 N1 N 0 1 Y N N -18.698 -40.120 2.039 -6.032 -1.275 1.665 N3 3A4 6 3A4 C28 C5 C 0 1 Y N N -18.347 -39.274 1.072 -5.998 -2.105 2.729 C28 3A4 7 3A4 N2 N2 N 0 1 Y N N -19.300 -39.265 0.147 -5.831 -3.326 2.302 N2 3A4 8 3A4 C27 C6 C 0 1 Y N N -20.252 -40.113 0.531 -5.758 -3.320 0.963 C27 3A4 9 3A4 N1 N3 N 0 1 N N N -22.491 -43.038 2.792 -3.760 -0.340 -0.500 N1 3A4 10 3A4 C22 C7 C 0 1 N N N -23.877 -42.660 2.465 -2.297 -0.467 -0.532 C22 3A4 11 3A4 C21 C8 C 0 1 N N S -24.432 -41.838 3.631 -1.667 0.689 0.248 C21 3A4 12 3A4 C20 C9 C 0 1 N N N -24.599 -42.670 4.879 -2.056 2.020 -0.403 C20 3A4 13 3A4 C19 C10 C 0 1 N N S -24.719 -41.616 5.944 -1.316 3.163 0.296 C19 3A4 14 3A4 C18 C11 C 0 1 N N N -24.656 -42.203 7.333 -1.730 4.493 -0.338 C18 3A4 15 3A4 C17 C12 C 0 1 N N N -24.553 -41.070 8.322 -0.991 5.641 0.351 C17 3A4 16 3A4 C16 C13 C 0 1 N N N -25.704 -40.089 8.144 0.518 5.447 0.183 C16 3A4 17 3A4 C15 C14 C 0 1 N N N -25.909 -39.638 6.703 0.933 4.120 0.821 C15 3A4 18 3A4 C14 C15 C 0 1 N N R -26.003 -40.841 5.789 0.194 2.969 0.135 C14 3A4 19 3A4 C13 C16 C 0 1 N N N -26.236 -40.360 4.371 0.608 1.646 0.789 C13 3A4 20 3A4 N N4 N 0 1 N N N -25.790 -41.342 3.401 -0.204 0.562 0.222 N 3A4 21 3A4 C C17 C 0 1 N N N -26.548 -41.674 2.377 0.382 -0.529 -0.311 C 3A4 22 3A4 O O2 O 0 1 N N N -26.755 -42.814 2.069 -0.294 -1.369 -0.873 O 3A4 23 3A4 C1 C18 C 0 1 Y N N -27.201 -40.545 1.628 1.846 -0.704 -0.212 C1 3A4 24 3A4 C12 C19 C 0 1 Y N N -26.860 -40.213 0.317 2.544 -0.158 0.868 C12 3A4 25 3A4 C11 C20 C 0 1 Y N N -27.491 -39.153 -0.334 3.907 -0.326 0.962 C11 3A4 26 3A4 C4 C21 C 0 1 Y N N -28.451 -38.410 0.344 4.591 -1.042 -0.020 C4 3A4 27 3A4 C3 C22 C 0 1 Y N N -28.788 -38.748 1.648 3.895 -1.587 -1.099 C3 3A4 28 3A4 C2 C23 C 0 1 Y N N -28.163 -39.802 2.287 2.532 -1.421 -1.195 C2 3A4 29 3A4 C5 C24 C 0 1 Y N N -29.189 -37.271 -0.289 6.059 -1.223 0.082 C5 3A4 30 3A4 C10 C25 C 0 1 Y N N -29.759 -36.288 0.517 6.746 -1.937 -0.898 C10 3A4 31 3A4 C9 C26 C 0 1 Y N N -30.464 -35.240 -0.048 8.113 -2.102 -0.797 C9 3A4 32 3A4 C8 C27 C 0 1 Y N N -30.616 -35.169 -1.419 8.800 -1.561 0.274 C8 3A4 33 3A4 C7 C28 C 0 1 Y N N -30.055 -36.143 -2.225 8.124 -0.851 1.250 C7 3A4 34 3A4 C6 C29 C 0 1 Y N N -29.347 -37.202 -1.671 6.759 -0.674 1.156 C6 3A4 35 3A4 H1 H1 H 0 1 N N N -19.729 -43.517 0.795 -4.796 -1.582 -3.533 H1 3A4 36 3A4 H2 H2 H 0 1 N N N -21.992 -42.078 0.953 -3.856 -2.313 -1.216 H2 3A4 37 3A4 H3 H3 H 0 1 N N N -19.857 -42.261 3.087 -6.376 -0.612 -0.954 H3 3A4 38 3A4 H4 H4 H 0 1 N N N -21.217 -41.102 3.268 -6.332 -2.297 -1.525 H4 3A4 39 3A4 H5 H5 H 0 1 N N N -18.173 -40.313 2.868 -6.145 -0.311 1.689 H5 3A4 40 3A4 H6 H6 H 0 1 N N N -17.438 -38.692 1.045 -6.094 -1.807 3.763 H6 3A4 41 3A4 H8 H8 H 0 1 N N N -21.168 -40.327 -0.000 -5.621 -4.186 0.331 H8 3A4 42 3A4 H9 H9 H 0 1 N N N -22.445 -44.034 2.865 -4.049 0.583 -0.787 H9 3A4 43 3A4 H11 H11 H 0 1 N N N -23.892 -42.059 1.544 -2.004 -1.414 -0.078 H11 3A4 44 3A4 H12 H12 H 0 1 N N N -24.487 -43.564 2.323 -1.952 -0.438 -1.566 H12 3A4 45 3A4 H13 H13 H 0 1 N N N -23.752 -40.998 3.838 -2.020 0.670 1.279 H13 3A4 46 3A4 H14 H14 H 0 1 N N N -25.506 -43.291 4.827 -1.783 2.001 -1.459 H14 3A4 47 3A4 H15 H15 H 0 1 N N N -23.723 -43.313 5.050 -3.131 2.171 -0.308 H15 3A4 48 3A4 H16 H16 H 0 1 N N N -23.879 -40.915 5.830 -1.572 3.169 1.355 H16 3A4 49 3A4 H17 H17 H 0 1 N N N -25.566 -42.788 7.531 -1.479 4.484 -1.398 H17 3A4 50 3A4 H18 H18 H 0 1 N N N -23.775 -42.855 7.421 -2.805 4.631 -0.221 H18 3A4 51 3A4 H19 H19 H 0 1 N N N -24.582 -41.479 9.343 -1.288 6.588 -0.101 H19 3A4 52 3A4 H20 H20 H 0 1 N N N -23.601 -40.541 8.166 -1.241 5.650 1.412 H20 3A4 53 3A4 H21 H21 H 0 1 N N N -25.501 -39.201 8.760 0.767 5.435 -0.878 H21 3A4 54 3A4 H22 H22 H 0 1 N N N -26.629 -40.573 8.491 1.046 6.266 0.671 H22 3A4 55 3A4 H23 H23 H 0 1 N N N -25.059 -39.012 6.394 2.008 3.982 0.704 H23 3A4 56 3A4 H24 H24 H 0 1 N N N -26.839 -39.055 6.633 0.682 4.133 1.881 H24 3A4 57 3A4 H25 H25 H 0 1 N N N -26.849 -41.470 6.102 0.449 2.952 -0.924 H25 3A4 58 3A4 H26 H26 H 0 1 N N N -25.680 -39.424 4.214 1.663 1.455 0.591 H26 3A4 59 3A4 H27 H27 H 0 1 N N N -27.311 -40.177 4.227 0.444 1.704 1.865 H27 3A4 60 3A4 H28 H28 H 0 1 N N N -26.101 -40.782 -0.199 2.014 0.397 1.629 H28 3A4 61 3A4 H29 H29 H 0 1 N N N -27.236 -38.912 -1.355 4.446 0.096 1.797 H29 3A4 62 3A4 H30 H30 H 0 1 N N N -29.546 -38.181 2.168 4.426 -2.141 -1.860 H30 3A4 63 3A4 H31 H31 H 0 1 N N N -28.427 -40.046 3.305 1.993 -1.847 -2.028 H31 3A4 64 3A4 H32 H32 H 0 1 N N N -29.650 -36.344 1.590 6.210 -2.361 -1.734 H32 3A4 65 3A4 H33 H33 H 0 1 N N N -30.896 -34.477 0.583 8.646 -2.656 -1.556 H33 3A4 66 3A4 H34 H34 H 0 1 N N N -31.172 -34.355 -1.861 9.870 -1.693 0.349 H34 3A4 67 3A4 H35 H35 H 0 1 N N N -30.169 -36.079 -3.297 8.667 -0.426 2.081 H35 3A4 68 3A4 H36 H36 H 0 1 N N N -28.923 -37.965 -2.306 6.231 -0.119 1.918 H36 3A4 69 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 3A4 C7 C6 DOUB Y N 1 3A4 C7 C8 SING Y N 2 3A4 C6 C5 SING Y N 3 3A4 C8 C9 DOUB Y N 4 3A4 C11 C12 DOUB Y N 5 3A4 C11 C4 SING Y N 6 3A4 C5 C4 SING N N 7 3A4 C5 C10 DOUB Y N 8 3A4 C9 C10 SING Y N 9 3A4 N2 C27 SING Y N 10 3A4 N2 C28 DOUB Y N 11 3A4 C12 C1 SING Y N 12 3A4 C4 C3 DOUB Y N 13 3A4 C27 C26 DOUB Y N 14 3A4 C28 N3 SING Y N 15 3A4 C24 O1 DOUB N N 16 3A4 C24 C23 SING N N 17 3A4 C1 C2 DOUB Y N 18 3A4 C1 C SING N N 19 3A4 C3 C2 SING Y N 20 3A4 C26 N3 SING Y N 21 3A4 C26 C25 SING N N 22 3A4 C23 C25 SING N N 23 3A4 C23 N1 SING N N 24 3A4 O C DOUB N N 25 3A4 C N SING N N 26 3A4 C22 N1 SING N N 27 3A4 C22 C21 SING N N 28 3A4 N C21 SING N N 29 3A4 N C13 SING N N 30 3A4 C21 C20 SING N N 31 3A4 C13 C14 SING N N 32 3A4 C20 C19 SING N N 33 3A4 C14 C19 SING N N 34 3A4 C14 C15 SING N N 35 3A4 C19 C18 SING N N 36 3A4 C15 C16 SING N N 37 3A4 C18 C17 SING N N 38 3A4 C16 C17 SING N N 39 3A4 C24 H1 SING N N 40 3A4 C23 H2 SING N N 41 3A4 C25 H3 SING N N 42 3A4 C25 H4 SING N N 43 3A4 N3 H5 SING N N 44 3A4 C28 H6 SING N N 45 3A4 C27 H8 SING N N 46 3A4 N1 H9 SING N N 47 3A4 C22 H11 SING N N 48 3A4 C22 H12 SING N N 49 3A4 C21 H13 SING N N 50 3A4 C20 H14 SING N N 51 3A4 C20 H15 SING N N 52 3A4 C19 H16 SING N N 53 3A4 C18 H17 SING N N 54 3A4 C18 H18 SING N N 55 3A4 C17 H19 SING N N 56 3A4 C17 H20 SING N N 57 3A4 C16 H21 SING N N 58 3A4 C16 H22 SING N N 59 3A4 C15 H23 SING N N 60 3A4 C15 H24 SING N N 61 3A4 C14 H25 SING N N 62 3A4 C13 H26 SING N N 63 3A4 C13 H27 SING N N 64 3A4 C12 H28 SING N N 65 3A4 C11 H29 SING N N 66 3A4 C3 H30 SING N N 67 3A4 C2 H31 SING N N 68 3A4 C10 H32 SING N N 69 3A4 C9 H33 SING N N 70 3A4 C8 H34 SING N N 71 3A4 C7 H35 SING N N 72 3A4 C6 H36 SING N N 73 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 3A4 SMILES ACDLabs 12.01 "O=CC(NCC3N(C(=O)c2ccc(c1ccccc1)cc2)CC4CCCCC4C3)Cc5cncn5" 3A4 InChI InChI 1.03 "InChI=1S/C29H34N4O2/c34-19-27(15-26-16-30-20-32-26)31-17-28-14-24-8-4-5-9-25(24)18-33(28)29(35)23-12-10-22(11-13-23)21-6-2-1-3-7-21/h1-3,6-7,10-13,16,19-20,24-25,27-28,31H,4-5,8-9,14-15,17-18H2,(H,30,32)/t24-,25-,27-,28-/m0/s1" 3A4 InChIKey InChI 1.03 VZCULZJNALRGNB-XEZODYMFSA-N 3A4 SMILES_CANONICAL CACTVS 3.385 "O=C[C@H](Cc1[nH]cnc1)NC[C@@H]2C[C@@H]3CCCC[C@H]3CN2C(=O)c4ccc(cc4)c5ccccc5" 3A4 SMILES CACTVS 3.385 "O=C[CH](Cc1[nH]cnc1)NC[CH]2C[CH]3CCCC[CH]3CN2C(=O)c4ccc(cc4)c5ccccc5" 3A4 SMILES_CANONICAL "OpenEye OEToolkits" 1.9.2 "c1ccc(cc1)c2ccc(cc2)C(=O)N3C[C@@H]4CCCC[C@H]4C[C@H]3CN[C@@H](Cc5cnc[nH]5)C=O" 3A4 SMILES "OpenEye OEToolkits" 1.9.2 "c1ccc(cc1)c2ccc(cc2)C(=O)N3CC4CCCCC4CC3CNC(Cc5cnc[nH]5)C=O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 3A4 "SYSTEMATIC NAME" ACDLabs 12.01 "(2S)-2-({[(3S,4aS,8aR)-2-(biphenyl-4-ylcarbonyl)decahydroisoquinolin-3-yl]methyl}amino)-3-(1H-imidazol-5-yl)propanal" 3A4 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.9.2 "(2S)-2-[[(3S,4aS,8aR)-2-(4-phenylphenyl)carbonyl-3,4,4a,5,6,7,8,8a-octahydro-1H-isoquinolin-3-yl]methylamino]-3-(1H-imidazol-5-yl)propanal" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 3A4 "Create component" 2014-07-15 RCSB 3A4 "Modify descriptor" 2014-09-05 RCSB 3A4 "Initial release" 2015-02-11 RCSB #