data_3AN # _chem_comp.id 3AN _chem_comp.name ;3'-DEOXY 3'-AMINO ADENOSINE-5'-DIPHOSPHATE ; _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C10 H16 N6 O9 P2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2001-01-08 _chem_comp.pdbx_modified_date 2011-06-04 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 426.216 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 3AN _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details ? _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 1HIY _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site EBI # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 3AN PB PB P 0 1 N N N 66.558 29.032 0.274 -1.117 0.245 -5.699 PB 3AN 1 3AN O1B O1B O 0 1 N N N 67.284 29.822 1.278 -1.698 -1.102 -5.507 O1B 3AN 2 3AN O2B O2B O 0 1 N N N 67.381 27.947 -0.362 -2.130 1.148 -6.565 O2B 3AN 3 3AN O3B O3B O 0 1 N N N 65.194 28.592 0.633 0.287 0.119 -6.475 O3B 3AN 4 3AN PA PA P 0 1 N N R 67.125 30.387 -2.214 0.139 -0.015 -3.455 PA 3AN 5 3AN O1A O1A O 0 1 N N N 67.561 29.014 -2.684 -0.513 -1.477 -3.284 O1A 3AN 6 3AN O2A O2A O 0 1 N N N 66.349 31.295 -3.072 1.411 -0.127 -4.203 O2A 3AN 7 3AN O3A O3A O 0 1 N N N 66.315 30.150 -0.853 -0.877 0.935 -4.264 O3A 3AN 8 3AN "O5'" O5* O 0 1 N N N 68.381 31.217 -1.721 0.424 0.617 -2.002 "O5'" 3AN 9 3AN "C5'" C5* C 0 1 N N N 68.216 32.592 -1.579 1.328 -0.267 -1.337 "C5'" 3AN 10 3AN "C4'" C4* C 0 1 N N S 68.572 33.206 -0.186 1.643 0.278 0.056 "C4'" 3AN 11 3AN "O4'" O4* O 0 1 N N N 68.977 34.575 -0.323 0.436 0.358 0.850 "O4'" 3AN 12 3AN "C3'" C3* C 0 1 N N S 67.324 33.281 0.674 2.557 -0.696 0.830 "C3'" 3AN 13 3AN "N3'" N3* N 0 1 N N N 67.427 32.432 1.681 3.958 -0.260 0.753 "N3'" 3AN 14 3AN "C2'" C2* C 0 1 N N R 67.161 34.753 1.050 2.046 -0.620 2.286 "C2'" 3AN 15 3AN "O2'" O2* O 0 1 N N N 67.914 35.283 2.198 3.078 -0.149 3.155 "O2'" 3AN 16 3AN "C1'" C1* C 0 1 N N R 67.807 35.407 -0.161 0.883 0.394 2.223 "C1'" 3AN 17 3AN N9 N9 N 0 1 Y N N 66.992 35.714 -1.408 -0.198 -0.012 3.124 N9 3AN 18 3AN C8 C8 C 0 1 Y N N 66.343 34.882 -2.323 -1.253 -0.815 2.807 C8 3AN 19 3AN N7 N7 N 0 1 Y N N 65.510 35.463 -3.123 -2.022 -0.969 3.846 N7 3AN 20 3AN C5 C5 C 0 1 Y N N 65.593 36.802 -2.742 -1.510 -0.278 4.892 C5 3AN 21 3AN C6 C6 C 0 1 Y N N 64.912 37.934 -3.219 -1.896 -0.079 6.229 C6 3AN 22 3AN N6 N6 N 0 1 N N N 63.779 37.731 -3.862 -3.044 -0.667 6.729 N6 3AN 23 3AN N1 N1 N 0 1 Y N N 65.202 39.168 -2.683 -1.132 0.685 7.002 N1 3AN 24 3AN C2 C2 C 0 1 Y N N 66.100 39.219 -1.662 -0.034 1.250 6.533 C2 3AN 25 3AN N3 N3 N 0 1 Y N N 66.792 38.195 -1.075 0.365 1.092 5.289 N3 3AN 26 3AN C4 C4 C 0 1 Y N N 66.481 36.983 -1.700 -0.331 0.340 4.443 C4 3AN 27 3AN HOB2 2HOB H 0 0 N N N 66.911 27.436 -1.011 -2.246 0.700 -7.415 HOB2 3AN 28 3AN HOB3 3HOB H 0 0 N N N 64.724 28.081 -0.016 0.630 1.017 -6.579 HOB3 3AN 29 3AN HOA1 1HOA H 0 0 N N N 68.062 28.427 -2.129 -1.338 -1.359 -2.793 HOA1 3AN 30 3AN "H5'1" 1H5* H 0 0 N N N 67.173 32.873 -1.855 2.250 -0.345 -1.913 "H5'1" 3AN 31 3AN "H5'2" 2H5* H 0 0 N N N 68.788 33.120 -2.377 0.872 -1.253 -1.246 "H5'2" 3AN 32 3AN "HC'4" 4HC* H 0 0 N N N 69.365 32.607 0.319 2.113 1.259 -0.017 "HC'4" 3AN 33 3AN "HC'3" 3HC* H 0 0 N N N 66.450 32.980 0.050 2.451 -1.709 0.441 "HC'3" 3AN 34 3AN "H3'1" 1H3* H 0 0 N N N 66.520 32.486 2.306 4.496 -0.915 1.300 "H3'1" 3AN 35 3AN "H3'2" 2H3* H 0 0 N N N 67.545 31.369 1.410 4.246 -0.378 -0.206 "H3'2" 3AN 36 3AN "HC'2" 2HC* H 0 0 N N N 66.083 35.028 1.122 1.685 -1.594 2.616 "HC'2" 3AN 37 3AN "HO'2" 2HO* H 0 0 N N N 67.813 36.198 2.432 2.702 -0.122 4.046 "HO'2" 3AN 38 3AN "HC'1" 1HC* H 0 0 N N N 68.187 36.392 0.198 1.236 1.392 2.481 "HC'1" 3AN 39 3AN HC8 8HC H 0 1 N N N 66.530 33.796 -2.361 -1.426 -1.257 1.837 HC8 3AN 40 3AN HN61 1HN6 H 0 0 N N N 63.244 38.620 -4.237 -3.300 -0.523 7.654 HN61 3AN 41 3AN HN62 2HN6 H 0 0 N N N 63.547 36.742 -4.292 -3.594 -1.224 6.155 HN62 3AN 42 3AN HC2 2HC H 0 1 N N N 66.297 40.223 -1.251 0.557 1.864 7.195 HC2 3AN 43 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 3AN PB O1B DOUB N N 1 3AN PB O2B SING N N 2 3AN PB O3B SING N N 3 3AN PB O3A SING N N 4 3AN O2B HOB2 SING N N 5 3AN O3B HOB3 SING N N 6 3AN PA O1A SING N N 7 3AN PA O2A DOUB N N 8 3AN PA O3A SING N N 9 3AN PA "O5'" SING N N 10 3AN O1A HOA1 SING N N 11 3AN "O5'" "C5'" SING N N 12 3AN "C5'" "C4'" SING N N 13 3AN "C5'" "H5'1" SING N N 14 3AN "C5'" "H5'2" SING N N 15 3AN "C4'" "O4'" SING N N 16 3AN "C4'" "C3'" SING N N 17 3AN "C4'" "HC'4" SING N N 18 3AN "O4'" "C1'" SING N N 19 3AN "C3'" "N3'" SING N N 20 3AN "C3'" "C2'" SING N N 21 3AN "C3'" "HC'3" SING N N 22 3AN "N3'" "H3'1" SING N N 23 3AN "N3'" "H3'2" SING N N 24 3AN "C2'" "O2'" SING N N 25 3AN "C2'" "C1'" SING N N 26 3AN "C2'" "HC'2" SING N N 27 3AN "O2'" "HO'2" SING N N 28 3AN "C1'" N9 SING N N 29 3AN "C1'" "HC'1" SING N N 30 3AN N9 C8 SING Y N 31 3AN N9 C4 SING Y N 32 3AN C8 N7 DOUB Y N 33 3AN C8 HC8 SING N N 34 3AN N7 C5 SING Y N 35 3AN C5 C6 DOUB Y N 36 3AN C5 C4 SING Y N 37 3AN C6 N6 SING N N 38 3AN C6 N1 SING Y N 39 3AN N6 HN61 SING N N 40 3AN N6 HN62 SING N N 41 3AN N1 C2 DOUB Y N 42 3AN C2 N3 SING Y N 43 3AN C2 HC2 SING N N 44 3AN N3 C4 DOUB Y N 45 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 3AN SMILES ACDLabs 10.04 "O=P(O)(O)OP(=O)(O)OCC3OC(n2cnc1c(ncnc12)N)C(O)C3N" 3AN SMILES_CANONICAL CACTVS 3.341 "N[C@H]1[C@@H](O)[C@@H](O[C@@H]1CO[P@](O)(=O)O[P](O)(O)=O)n2cnc3c(N)ncnc23" 3AN SMILES CACTVS 3.341 "N[CH]1[CH](O)[CH](O[CH]1CO[P](O)(=O)O[P](O)(O)=O)n2cnc3c(N)ncnc23" 3AN SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "c1nc(c2c(n1)n(cn2)[C@H]3[C@@H]([C@@H]([C@H](O3)CO[P@@](=O)(O)OP(=O)(O)O)N)O)N" 3AN SMILES "OpenEye OEToolkits" 1.5.0 "c1nc(c2c(n1)n(cn2)C3C(C(C(O3)COP(=O)(O)OP(=O)(O)O)N)O)N" 3AN InChI InChI 1.03 "InChI=1S/C10H16N6O9P2/c11-5-4(1-23-27(21,22)25-26(18,19)20)24-10(7(5)17)16-3-15-6-8(12)13-2-14-9(6)16/h2-5,7,10,17H,1,11H2,(H,21,22)(H2,12,13,14)(H2,18,19,20)/t4-,5-,7-,10-/m1/s1" 3AN InChIKey InChI 1.03 VKODIDNZKBYXJO-QYYRPYCUSA-N # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 3AN "SYSTEMATIC NAME" ACDLabs 10.04 ;3'-amino-3'-deoxyadenosine 5'-(trihydrogen diphosphate) ; 3AN "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "[(2S,3S,4R,5R)-3-amino-5-(6-aminopurin-9-yl)-4-hydroxy-oxolan-2-yl]methyl phosphono hydrogen phosphate" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 3AN "Create component" 2001-01-08 EBI 3AN "Modify descriptor" 2011-06-04 RCSB #