data_3EF # _chem_comp.id 3EF _chem_comp.name "N-{(2S)-3-[(S)-[(1R)-1-{[(benzyloxy)carbonyl]amino}-2-phenylethyl](hydroxy)phosphoryl]-2-[(3-phenyl-1,2-oxazol-5-yl)methyl]propanoyl}-L-tyrosine" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C38 H38 N3 O9 P" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2013-10-08 _chem_comp.pdbx_modified_date 2013-12-06 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 711.697 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 3EF _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 4CA5 _chem_comp.pdbx_subcomponent_list "PHQ PPH 1JK TYR" _chem_comp.pdbx_processing_site EBI # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 3EF OAB OAB O 0 1 N N N 14.530 -5.231 -15.687 4.949 -0.032 -1.655 OAB PHQ 1 3EF CAH CAH C 0 1 Y N N 13.972 1.538 -14.573 9.860 3.934 1.021 CAH PHQ 2 3EF CAK CAK C 0 1 Y N N 13.948 0.672 -13.480 8.688 4.506 0.563 CAK PHQ 3 3EF CAL CAL C 0 1 Y N N 14.262 1.035 -15.835 10.090 2.584 0.832 CAL PHQ 4 3EF CAQ CAQ C 0 1 Y N N 14.201 -0.694 -13.650 7.743 3.727 -0.078 CAQ PHQ 5 3EF CAR CAR C 0 1 Y N N 14.524 -0.333 -16.007 9.148 1.806 0.185 CAR PHQ 6 3EF CBB CBB C 0 1 N N N 14.766 -2.590 -15.090 6.944 1.528 -0.967 CBB PHQ 7 3EF OBJ OBJ O 0 1 N N N 13.874 -3.098 -16.118 6.022 0.973 0.007 OBJ PHQ 8 3EF CBM CBM C 0 1 N N N 13.875 -4.428 -16.371 5.036 0.185 -0.463 CBM PHQ 9 3EF CBP CBP C 0 1 Y N N 14.498 -1.204 -14.915 7.970 2.376 -0.262 CBP PHQ 10 3EF OAD OAD O 0 1 N N N 13.585 -5.504 -20.328 1.126 -0.008 1.311 O1 PPH 11 3EF PBY PBY P 0 1 N N N 14.067 -6.424 -19.270 1.497 -0.303 -0.091 P1 PPH 12 3EF OAG OAG O 0 1 N N N 15.461 -6.218 -18.809 1.661 1.076 -0.905 O2 PPH 13 3EF CBX CBX C 0 1 N N R 13.001 -6.255 -17.798 3.074 -1.219 -0.123 C1 PPH 14 3EF NBI NBI N 0 1 N N N 13.140 -4.844 -17.408 4.146 -0.362 0.389 N1 PPH 15 3EF CBE CBE C 0 1 N N N 11.502 -6.510 -18.056 2.956 -2.467 0.754 C2 PPH 16 3EF CBQ CBQ C 0 1 Y N N 10.754 -6.327 -16.856 4.214 -3.288 0.630 C3 PPH 17 3EF CAS CAS C 0 1 Y N N 10.519 -7.410 -16.007 5.303 -3.009 1.435 C4 PPH 18 3EF CAM CAM C 0 1 Y N N 9.794 -7.259 -14.818 6.457 -3.762 1.321 C5 PPH 19 3EF CAI CAI C 0 1 Y N N 9.302 -5.997 -14.456 6.521 -4.794 0.403 C6 PPH 20 3EF CAN CAN C 0 1 Y N N 9.548 -4.891 -15.284 5.432 -5.073 -0.401 C7 PPH 21 3EF CAT CAT C 0 1 Y N N 10.260 -5.061 -16.480 4.277 -4.323 -0.284 C8 PPH 22 3EF OAC OAC O 0 1 N N N 11.893 -8.126 -21.585 -2.009 -2.725 -1.314 OAC 1JK 23 3EF CAJ CAJ C 0 1 Y N N 16.437 -13.220 -28.155 -6.140 5.844 1.218 CAJ 1JK 24 3EF CAO CAO C 0 1 Y N N 16.923 -11.906 -28.155 -6.803 5.042 0.307 CAO 1JK 25 3EF CAP CAP C 0 1 Y N N 15.775 -13.713 -27.026 -4.798 5.635 1.482 CAP 1JK 26 3EF CAU CAU C 0 1 Y N N 16.742 -11.091 -27.029 -6.128 4.028 -0.343 CAU 1JK 27 3EF CAV CAV C 0 1 Y N N 15.598 -12.888 -25.905 -4.115 4.621 0.842 CAV 1JK 28 3EF CBA CBA C 0 1 Y N N 15.161 -10.964 -23.726 -2.675 2.379 -0.620 CBA 1JK 29 3EF CBC CBC C 0 1 N N N 14.718 -9.726 -21.510 -1.230 0.566 -1.695 CBC 1JK 30 3EF CBF CBF C 0 1 N N N 13.933 -8.123 -19.802 0.192 -1.314 -0.865 CBF 1JK 31 3EF NBG NBG N 0 1 Y N N 16.646 -9.663 -24.663 -4.534 1.888 -1.659 NBG 1JK 32 3EF OBK OBK O 0 1 Y N N 16.305 -9.077 -23.392 -3.689 1.117 -2.050 OBK 1JK 33 3EF CBN CBN C 0 1 N N N 13.014 -8.025 -22.093 -2.269 -1.580 -1.012 CBN 1JK 34 3EF CBS CBS C 0 1 Y N N 15.387 -9.936 -22.878 -2.504 1.335 -1.463 CBS 1JK 35 3EF CBT CBT C 0 1 Y N N 16.063 -11.568 -25.899 -4.777 3.814 -0.081 CBT 1JK 36 3EF CBU CBU C 0 1 Y N N 15.931 -10.772 -24.808 -4.047 2.725 -0.777 CBU 1JK 37 3EF CBV CBV C 0 1 N N S 14.285 -8.259 -21.281 -1.156 -0.607 -0.715 CBV 1JK 38 3EF N N N 0 1 N N N 13.222 -7.732 -23.380 -3.553 -1.176 -0.942 N TYR 39 3EF CA CA C 0 1 N N S 12.102 -7.579 -24.300 -4.634 -2.122 -1.230 CA TYR 40 3EF C C C 0 1 N N N 11.514 -8.980 -24.618 -4.880 -2.165 -2.716 C TYR 41 3EF O O O 0 1 N N N 10.499 -9.012 -25.334 -4.220 -1.477 -3.458 O TYR 42 3EF CB CB C 0 1 N N N 12.537 -6.853 -25.585 -5.910 -1.671 -0.515 CB TYR 43 3EF CG CG C 0 1 Y N N 13.799 -7.077 -26.140 -5.703 -1.745 0.976 CG TYR 44 3EF CD1 CD1 C 0 1 Y N N 13.942 -7.962 -27.213 -6.002 -2.910 1.657 CD1 TYR 45 3EF CD2 CD2 C 0 1 Y N N 14.921 -6.374 -25.666 -5.208 -0.649 1.659 CD2 TYR 46 3EF CE1 CE1 C 0 1 Y N N 15.203 -8.165 -27.792 -5.812 -2.981 3.024 CE1 TYR 47 3EF CE2 CE2 C 0 1 Y N N 16.177 -6.578 -26.247 -5.017 -0.715 3.026 CE2 TYR 48 3EF CZ CZ C 0 1 Y N N 16.320 -7.469 -27.311 -5.321 -1.881 3.713 CZ TYR 49 3EF OH OH O 0 1 N N N 17.549 -7.661 -27.888 -5.134 -1.948 5.057 OH TYR 50 3EF OXT OXT O 0 1 N N N 12.067 -9.992 -24.100 -5.833 -2.968 -3.215 OXT TYR 51 3EF HAH HAH H 0 1 N N N 13.767 2.590 -14.439 10.598 4.543 1.523 HAH PHQ 52 3EF HAK HAK H 0 1 N N N 13.733 1.058 -12.495 8.510 5.562 0.707 HAK PHQ 53 3EF HAL HAL H 0 1 N N N 14.286 1.699 -16.687 11.006 2.137 1.190 HAL PHQ 54 3EF HAQ HAQ H 0 1 N N N 14.166 -1.357 -12.798 6.827 4.174 -0.436 HAQ PHQ 55 3EF HAR HAR H 0 1 N N N 14.748 -0.716 -16.992 9.328 0.752 0.037 HAR PHQ 56 3EF HBB HBB H 0 1 N N N 14.589 -3.126 -14.146 7.444 0.717 -1.497 HBB PHQ 57 3EF HBBA HBBA H 0 0 N N N 15.812 -2.731 -15.401 6.393 2.142 -1.680 HBBA PHQ 58 3EF HOAG HOAG H 0 0 N N N 15.849 -5.493 -19.286 1.905 0.959 -1.834 H1 PPH 59 3EF HBX HBX H 0 1 N N N 13.389 -6.936 -17.027 3.302 -1.514 -1.147 H2 PPH 60 3EF HNBI HNBI H 0 0 N N N 12.657 -4.156 -17.949 4.216 -0.188 1.341 H4 PPH 61 3EF HBE HBE H 0 1 N N N 11.140 -5.806 -18.820 2.817 -2.169 1.793 H5 PPH 62 3EF HBEA HBEA H 0 0 N N N 11.366 -7.541 -18.414 2.102 -3.060 0.428 H6 PPH 63 3EF HAS HAS H 0 1 N N N 10.904 -8.384 -16.272 5.253 -2.203 2.151 H7 PPH 64 3EF HAM HAM H 0 1 N N N 9.614 -8.113 -14.182 7.308 -3.544 1.949 H8 PPH 65 3EF HAI HAI H 0 1 N N N 8.736 -5.877 -13.544 7.423 -5.382 0.315 H9 PPH 66 3EF HAN HAN H 0 1 N N N 9.190 -3.912 -15.001 5.483 -5.879 -1.118 H10 PPH 67 3EF HAT HAT H 0 1 N N N 10.432 -4.210 -17.122 3.424 -4.543 -0.909 H11 PPH 68 3EF HAJ HAJ H 0 1 N N N 16.573 -13.849 -29.022 -6.670 6.639 1.721 HAJ 1JK 69 3EF HAO HAO H 0 1 N N N 17.437 -11.521 -29.023 -7.850 5.209 0.104 HAO 1JK 70 3EF HAP HAP H 0 1 N N N 15.401 -14.726 -27.017 -4.284 6.267 2.192 HAP 1JK 71 3EF HAU HAU H 0 1 N N N 17.130 -10.083 -27.032 -6.647 3.402 -1.054 HAU 1JK 72 3EF HAV HAV H 0 1 N N N 15.095 -13.278 -25.033 -3.068 4.459 1.049 HAV 1JK 73 3EF HBAA HBAA H 0 0 N N N 14.484 -11.789 -23.562 -1.942 2.841 0.025 HBAA 1JK 74 3EF HBC HBC H 0 1 N N N 13.828 -10.370 -21.450 -1.215 0.187 -2.717 HBC 1JK 75 3EF HBCA HBCA H 0 0 N N N 15.430 -10.011 -20.722 -0.375 1.224 -1.538 HBCA 1JK 76 3EF HBF HBF H 0 1 N N N 12.901 -8.470 -19.644 0.416 -1.448 -1.923 HBF 1JK 77 3EF HBFA HBFA H 0 0 N N N 14.623 -8.742 -19.209 0.149 -2.287 -0.377 HBFA 1JK 78 3EF HBV HBV H 0 1 N N N 15.083 -7.559 -21.571 -1.260 -0.236 0.305 HBV 1JK 79 3EF HN HN H 0 1 N N N 14.157 -7.616 -23.716 -3.761 -0.260 -0.700 H2 TYR 80 3EF HA HA H 0 1 N N N 11.315 -6.981 -23.817 -4.352 -3.114 -0.879 HA TYR 81 3EF HB HB H 0 1 N N N 11.802 -7.118 -26.359 -6.142 -0.645 -0.799 HB2 TYR 82 3EF HBA HBA H 0 1 N N N 12.474 -5.775 -25.373 -6.735 -2.323 -0.800 HB3 TYR 83 3EF HD1 HD1 H 0 1 N N N 13.081 -8.489 -27.596 -6.384 -3.766 1.121 HD1 TYR 84 3EF HD2 HD2 H 0 1 N N N 14.813 -5.674 -24.851 -4.971 0.258 1.124 HD2 TYR 85 3EF HE1 HE1 H 0 1 N N N 15.314 -8.860 -28.611 -6.050 -3.890 3.556 HE1 TYR 86 3EF HE2 HE2 H 0 1 N N N 17.038 -6.045 -25.871 -4.631 0.141 3.559 HE2 TYR 87 3EF HOH HOH H 0 1 N N N 18.194 -7.119 -27.449 -4.255 -2.254 5.317 HH TYR 88 3EF HOXT HOXT H 0 0 N N N 11.587 -10.775 -24.343 -5.954 -2.962 -4.175 HXT TYR 89 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 3EF O C DOUB N N 1 3EF C CA SING N N 2 3EF C OXT SING N N 3 3EF CA N SING N N 4 3EF N CBN SING N N 5 3EF N HN SING N N 6 3EF CB CA SING N N 7 3EF CA HA SING N N 8 3EF CG CB SING N N 9 3EF CB HB SING N N 10 3EF CB HBA SING N N 11 3EF CD1 CG DOUB Y N 12 3EF CG CD2 SING Y N 13 3EF OH CZ SING N N 14 3EF OH HOH SING N N 15 3EF CE1 CZ DOUB Y N 16 3EF CZ CE2 SING Y N 17 3EF CBM OAB DOUB N N 18 3EF CBN OAC DOUB N N 19 3EF OAD PBY DOUB N N 20 3EF PBY OAG SING N N 21 3EF OAG HOAG SING N N 22 3EF CAL CAH DOUB Y N 23 3EF CAH CAK SING Y N 24 3EF CAH HAH SING N N 25 3EF CAN CAI DOUB Y N 26 3EF CAM CAI SING Y N 27 3EF CAI HAI SING N N 28 3EF CAO CAJ DOUB Y N 29 3EF CAJ CAP SING Y N 30 3EF CAJ HAJ SING N N 31 3EF CAQ CAK DOUB Y N 32 3EF CAK HAK SING N N 33 3EF CAR CAL SING Y N 34 3EF CAL HAL SING N N 35 3EF CAS CAM DOUB Y N 36 3EF CAM HAM SING N N 37 3EF CAT CAN SING Y N 38 3EF CAN HAN SING N N 39 3EF CAO CAU SING Y N 40 3EF CAO HAO SING N N 41 3EF CAP CAV DOUB Y N 42 3EF CAP HAP SING N N 43 3EF CBP CAQ SING Y N 44 3EF CAQ HAQ SING N N 45 3EF CAR CBP DOUB Y N 46 3EF CAR HAR SING N N 47 3EF CBQ CAS SING Y N 48 3EF CAS HAS SING N N 49 3EF CBQ CAT DOUB Y N 50 3EF CAT HAT SING N N 51 3EF CAU CBT DOUB Y N 52 3EF CAU HAU SING N N 53 3EF CAV CBT SING Y N 54 3EF CAV HAV SING N N 55 3EF CBU CBA SING Y N 56 3EF CBA CBS DOUB Y N 57 3EF CBA HBAA SING N N 58 3EF OBJ CBB SING N N 59 3EF CBB CBP SING N N 60 3EF CBB HBB SING N N 61 3EF CBB HBBA SING N N 62 3EF CBS CBC SING N N 63 3EF CBC CBV SING N N 64 3EF CBC HBC SING N N 65 3EF CBC HBCA SING N N 66 3EF CBE CBX SING N N 67 3EF CBE CBQ SING N N 68 3EF CBE HBE SING N N 69 3EF CBE HBEA SING N N 70 3EF CBV CBF SING N N 71 3EF CBF PBY SING N N 72 3EF CBF HBF SING N N 73 3EF CBF HBFA SING N N 74 3EF CBU NBG DOUB Y N 75 3EF NBG OBK SING Y N 76 3EF CBX NBI SING N N 77 3EF NBI CBM SING N N 78 3EF NBI HNBI SING N N 79 3EF CBM OBJ SING N N 80 3EF OBK CBS SING Y N 81 3EF CBN CBV SING N N 82 3EF CBT CBU SING N N 83 3EF CBV HBV SING N N 84 3EF PBY CBX SING N N 85 3EF CBX HBX SING N N 86 3EF CE1 CD1 SING Y N 87 3EF CD1 HD1 SING N N 88 3EF CE2 CD2 DOUB Y N 89 3EF CD2 HD2 SING N N 90 3EF CE1 HE1 SING N N 91 3EF CE2 HE2 SING N N 92 3EF OXT HOXT SING N N 93 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 3EF SMILES ACDLabs 12.01 "O=C(O)C(NC(=O)C(CP(=O)(O)C(NC(=O)OCc1ccccc1)Cc2ccccc2)Cc4onc(c3ccccc3)c4)Cc5ccc(O)cc5" 3EF InChI InChI 1.03 ;InChI=1S/C38H38N3O9P/c42-31-18-16-27(17-19-31)20-34(37(44)45)39-36(43)30(22-32-23-33(41-50-32)29-14-8-3-9-15-29)25-51(47,48)35(21-26-10-4-1-5-11-26)40-38(46)49-24-28-12-6-2-7-13-28/h1-19,23,30,34-35,42H,20-22,24-25H2,(H,39,43)(H,40,46)(H,44,45)(H,47,48)/t30-,34+,35-/m1/s1 ; 3EF InChIKey InChI 1.03 ZPFSKFCSVXPMBD-JHOVWCEZSA-N 3EF SMILES_CANONICAL CACTVS 3.385 "OC(=O)[C@H](Cc1ccc(O)cc1)NC(=O)[C@H](Cc2onc(c2)c3ccccc3)C[P](O)(=O)[C@H](Cc4ccccc4)NC(=O)OCc5ccccc5" 3EF SMILES CACTVS 3.385 "OC(=O)[CH](Cc1ccc(O)cc1)NC(=O)[CH](Cc2onc(c2)c3ccccc3)C[P](O)(=O)[CH](Cc4ccccc4)NC(=O)OCc5ccccc5" 3EF SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "c1ccc(cc1)C[C@H](NC(=O)OCc2ccccc2)P(=O)(C[C@@H](Cc3cc(no3)c4ccccc4)C(=O)N[C@@H](Cc5ccc(cc5)O)C(=O)O)O" 3EF SMILES "OpenEye OEToolkits" 1.7.6 "c1ccc(cc1)CC(NC(=O)OCc2ccccc2)P(=O)(CC(Cc3cc(no3)c4ccccc4)C(=O)NC(Cc5ccc(cc5)O)C(=O)O)O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 3EF "SYSTEMATIC NAME" ACDLabs 12.01 "N-{(2S)-3-[(S)-[(1R)-1-{[(benzyloxy)carbonyl]amino}-2-phenylethyl](hydroxy)phosphoryl]-2-[(3-phenyl-1,2-oxazol-5-yl)methyl]propanoyl}-L-tyrosine" 3EF "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "(2S)-3-(4-hydroxyphenyl)-2-[[(2S)-2-[[oxidanyl-[(1R)-2-phenyl-1-(phenylmethoxycarbonylamino)ethyl]phosphoryl]methyl]-3-(3-phenyl-1,2-oxazol-5-yl)propanoyl]amino]propanoic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 3EF "Create component" 2013-10-08 EBI 3EF "Initial release" 2013-12-11 RCSB #